ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448665 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◣ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
ZC3H10
RPL41
MTRNR2L2
MSH3
DHFR
MTRNR2L1
PHF1
C6orf226
DUX4
H2BC4
H2AC6
FRG2C
MUC3A
DHPS
UBE2M
CHMP2A
IER3
FLOT1
H2BC11
H2AC11
H4C9
PHF23
DVL2
MTRNR2L8
JUNB
MAZ
ATAT1
SLC38A2
HES7
ALOXE3
RPL17-C18orf32
RPL17
C18orf32
CCDC200
H4-16
H2AJ
SYCE2
NDUFAF3
DALRD3
IER5L
STX10
IER2
H4C12
IFITM1
IFITM3
TMSB4X
ADM
EDC4
SNX16
B3GALT4
ID3
FRG2
H4C3
H1-6
MSH4
H3C15
H3C14
H2AC19
H2AC18
JMJD7-PLA2G4B
JMJD7
MPDU1
LOC100996842
CD68
NAT10
GADD45B
ZBTB45
ARFGAP2
H2BC5
H1-4
KRBA2
WDR74
MT2A
IKBKG
G6PD
VPS28
H4C11
FTH1
PDE4A
RPS2
NDUFB10
SUMF2
SYNRG
RABL6
GAPDH
NRAS
RCC1
H2AZ1
DNAJB14
IFITM2
ARHGDIA
RPL22L1
H4C2
H4C1
C12orf57
CDK11B
CDK11A
SLC39A7
RXRB
HSD17B8
RING1
RPS28
NDUFA7
C19orf53
NOP53
CHD2
SSC5D
NAT14
H2BC12
H2AC12
RHOB
DDIT4
RAD23A
ABTB1
H2BC21
H2AC21
H2AC20
COX18
SLC3A2
RPL13
PDCD2L
NPDC1
ENTPD2
AKAP8
TUBB
TRIM8
CCDC24
CUL7
H4C7
H3C7
H2BC9
SIX5
SLC35E3
RGL2
ZFX
ZBTB22
TAPBP
C1QTNF8
PRKAG1
IDI1
PSMG1
MT1M
MT1E
POLG2
CLN8
DNAJC9
PFN1
RNF167
SLC25A11
ENO3
POMZP3
WDR6
DUSP2
ASTL
GRAMD2A
FTL
RRP36
MEA1
MID1IP1
STUB1
JMJD8
WBP1
INO80B
RHBDL1
SCRIB
CEBPB
H3C12
H2BC17
H2AC17
H3-3B
FAM131A
ZNF446
MRPL28
H1-2
H2BC8
H2AC8
GANAB
ZNF34
RPL8
ZBTB12
EHMT2
C2
DAPK3
VTI1B
PRRT2
PAGR1
CXorf38
TMEM230
GGA2
TRIM37
DHRS11
SLC50A1
DPM3
ADAMTS10
UCKL1
SNAPC5
SECISBP2
P2RY11
RIT1
CIRBP
TMSB10
LDHC
CCDC107
WDR97
MAF1
PFDN5
MYG1
SH3BGRL3
FAM228B
SF3B6
FLOT2
ZNF48
RPS15A
CDK16
NADSYN1
DHCR7
GPAA1
EXOSC4
RPL10
ZNF703
TNFRSF12A
THOC6
HCFC1R1
CENPA
ARHGAP39
RCE1
APOM
GPANK1
C6orf47
KIF2C
WDR38
RPL35
BORCS6
H3C2
H2AC4
PRKRIP1
EIF1
IDH3B
UBB
ZNF581
ZNF580
ZNF653
MDP1
CHMP4A
TOM1
ORAI3
NFKBIA
MRPL53
ID1
PHLDA1
ARHGAP4
PIP5KL1
IRX3
RPS11
MAML1
SFN
SCAMP3
COX20
TUBA1B
CCDC34
ATP5F1E
MAPKBP1
ABCB6
RNASEK
C17orf49
DDAH2
RABGEF1
H2BC7
H4C5
H3C4
H2AC7
HNRNPA1
CBX5
UBC
TUBB4B
FAM166A
KMT5B
TEDC2
NOLC1
HAX1
NPM3
FGF8
C2CD4C
LRRC24
C8orf82
HPDL
KLRC2
IGF2BP3
H3C10
H2BC13
H2AC13
EPN1
MTFP1
GPN2
UBTF
GAS2L1
H2AX
HMBS
CEMP1
CEBPA
CDH24
CXCR5
TSC22D1
MLLT6
TIGD5
EEF1D
SP3
TBK1
VEZF1
TNFSF13
SENP3
SURF6
DYRK1B
CD79A
ZNF584
H3C13
H2BC18
H1-10
ABHD10
ICA1L
GATD3B
GATD3A
ANTKMT
VPS4A
AMDHD2
MTA2
CSKMT
C11orf98
UQCC3
LBHD1
ZNHIT2
PRMT3
MRPL49
FAU
ACP4
MAD1L1
NKIRAS1
RPL15
HMCES
ELK1
GMPPB
AMIGO3
RAB40C
VWA7
MRPL40
HIRA
HCN2
CAMK2N2
SNAP47
TSPAN31
AGAP2
PHOX2A
PCBP1
TUSC2
H2BC15
H2AC15
ISY1-RAB43
ISY1
ROPN1L
FUT11
COL23A1
INPP5K
GET4
NXF1
SLC12A6
CELSR3
MROH6
RPS29
GAS1
INPP5E
FBF1
S100A6
TAOK2
PIM2
PCF11
MYOZ3
NDST2
CAPNS1
ARL6IP4
RBM4
GMEB2
MFSD3
HMGA1
FADS2
FADS1
VEGFB
DNAJC4
TRPT1
NUDT22
PTOV1
NANOS1
CYRIB
SELENOH
RAB26
TRAF7
TUT1
H4C14
H4C15
TMEM132A
NOL3
PYGO2
LOC101928120
CTNNAL1
UPF3A
YY1
H3C8
H2BC10
SMIM29
TMEM134
ABHD16B
SAT1
ZFP36L1
TBCD
NUDT17
SRA1
C17orf98
SMTN
H3C1
H1-1
MVB12A
POMT1
STAG1
ANAPC4
FAM156B
FAM156A
CHD5
TMEM107
SPOUT1
PWP2
LOC102724159
BASP1
MAPK8IP3
GTF2A2
MAN2C1
SLC25A39
C19orf71
IAH1
DPH7
H4C8
TFPT
PRPF31
LMNB1
ARID5B
URGCP
URGCP-MRPS24
CLIC3
PPP1R15B
DMPK
PSMB10
CTRL
DUSP1
CSNK1G1
XRN1
RILP
MMP24OS
MMP24-AS1-EDEM2
SCFD1
SNX14
DCAKD
HMGN2
CDKN1C
TIGD3
SHOX2
RSRC1
CEBPD
HTR6
TCIRG1
ZNF513
SLC35B2
ADAT1
EPN2
TAF10
MYL6
TXNIP
GCN1
MCCD1
TNS2
PRAF2
LENG9
CRELD1
SUOX
HDAC10
ATF4
E2F3
CISD3
SPHK2
FAM83E
RPL18
HYAL1
NAA80
HYAL3
DONSON
IQCG
MOV10
PCBP4
THOC5
LMLN
SEC14L1
PNMA1
NME4
DECR2
POLB
LGR6
TLCD1
NEK8
GSTO2
TBR1
C5orf15
STYX
TXN2
TTLL3
GPR137
PTCH1
PNRC2
SLC39A1
CRTC2
OPRL1
LKAAEAR1
TULP3
DPM2
C5orf24
FIBP
CCDC85B
GNE
CKB
ROMO1
LRP2BP
ANKRD37
PYGM
FBXW4
C11orf91
ADK
CCDC138
NAPRT
TTYH2
BAD
AK1
C20orf144
ACTL10
PITX3
GBF1
SLC5A5
SRSF11
VARS2
MLXIP
ANP32B
TEX52
SRRT
CCDC106
CRK
MIF4GD
RHOF
PIP4K2B
HAMP
CD320
POLD1
FAM89B
EHBP1L1
IGF1R
ZNRD2
APTX
ABCA7
IL17C
ZASP
SAP25
SELENOO
TMEM223
TMEM179B
TLL2
REEP4
LLGL2
APOLD1
C16orf46
PHLDA2
MRI1
ABCF3
NUMBL
FAM174C
TIMM13
PABPN1
FBXO4
RPLP2
PIDD1
SIGMAR1
ARID3C
SSH3
GNB1
RRAD
CDH16
OAZ1
KRT8
MCOLN1
CDC6
HSPB1
ZACN
GALR2
NME3
MRPS34
EME2
IMPDH2
MLX
COASY
POM121C
SFXN4
DDX56
HSPE1-MOB4
HSPE1
HSPD1
TAF6
CNPY4
ZNF35
SLC25A42
AJM1
ZFP36L2
NDUFS3
KBTBD4
SIRT7
KLHL11
CELF1
PATZ1
WDR90
MATR3
POP5
TUBD1
RPS6KB1
BUD13
MSMP
DRAP1
C11orf68
TTC33
DYNLL1
C7orf26
TARBP2
MAP3K12
MRM1
SLC25A5
IFRD2
SRSF2
MFSD11
DNAJB4
RAB1B
JADE2
RNF223
LARP1
GADD45A
CEP192
DPH2
B4GALT2
ATP6V0B
KPNB1
SCML1
NECAB3
FNBP1
ZNF865
TRIM52
IRF2BP1
TSFM
SLC25A10
EXOSC6
CITED4
SPEN
RNF225
TLCD2
NOP2
APOE
ULK3
TUBGCP6
CDK5R1
RNF44
CDHR2
USP21
CASP6
NOL7
CHEK1
MTFR2
PNPLA2
BAG2
MRNIP
RHOV
GRWD1
COPS6
IRF2BP2
FUT8
ETS2
RRM1
EIF4A1
MIOX
FSTL3
METRN
ACOX3
TEX45
SLC25A6
MST1
PLPP5
ARHGEF12
KCNK7
CCAR2
SEC16A
C9orf163
WDR83OS
WDR83
MAN2B1
WDR45
RPS23
ATP6AP1L
PPFIA4
PPP1R37
ZNF251
USF2
IFI35
RPUSD1
CHTF18
LZTS2
TTC16
PTRH1
THAP7
UBE2C
FDX2
DPP3
TYMP
SCO2
CCND1
HUWE1
ARF3
DLG4
ACADVL
KAT5
RRS1
ADHFE1
MCRIP2
ACTN4
KLF9
C8orf76
PTMS
LAG3
ST6GALNAC6
CRACR2B
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
BAZ2A
MED26
KDM4B
GPX1
E4F1
PPP1R35
TENT4A
PIK3R2
HAS3
PKP3
MRPS24
WDR27
C6orf120
SNX22
TMF1
ELMO3
ST3GAL3
WDR24
CCDC97
FBXO31
MAP1LC3B
MADD
SPTAN1
H3-2
ANKRD39
AHNAK2
SEC31A
LRFN4
FAM219B
ZNF517
SEC14L2
CXCR4
PLCXD1
SOD2
JPT2
TOR3A
ACAT2
RPS13
UNC13D
LRCH3
EVA1B
GPS2
MYO1G
TMEM139
CASP2
AP2M1
AGO3
CCDC130
SLC25A17
CYC1
RPL19
AMZ2
MTRF1L
ELOVL1
PRKACA
CDC20
CACNB1
ANKRD54
PNKP
SLC39A10
APC2
CEND1
TOB2
KMT2E
SPSB2
TPI1
GDF15
KRT18
PTP4A1
PGP
BRICD5
HES3
PDF
CPT1A
FZD9
SNAPC4
CSRNP2
IL34
CCDC78
RECQL4
LRRC14
HAGHL
ANKRD12
NDUFB2
SETD1B
SRSF4
H2BU1
H2AW
CS
SLURP1
OSTC
PHTF1
L3MBTL1
DBP
TCTEX1D2
PTPN6
DNASE1L2
LBR
TSSC4
RASD1
TRADD
HSF4
FBXL8
SLC5A3
MRPS6
CACNB3
ZBED8
TFAP2A
SWSAP1
ITGAD
EDEM1
SPAG7
CCNB2
MXRA8
DVL1
H1-0
GCAT
MAP4K2
SRCAP
LOC730183
PPOX
SPATC1L
H2BC14
H2AC14
RPS20
SNX5
MGME1
THAP3
NR3C1
PELO
ITGA1
RPL36
SAMD1
NOXO1
GFER
PHIP
GABARAP
RPLP1
C19orf67
ZBTB38
AGBL2
MRPS28
SLC35A2
TEX22
MXD1
VPS13C
USP34
MPHOSPH8
TRAPPC4
RPS25
TFAM
HSPA1L
HSPA1A
MKNK1
COQ7
IFITM5
UNC45A
HDDC3
RBMX
TSC22D3
RPS27A
CLHC1
SMG9
TMEM101
DCK
COMMD5
SPSB3
NUBP2
MRPL12
ARID1A
RDH5
COL9A3
KCTD11
TCIM
ZNF720
NAAA
LRP6
PGAM2
ADRM1
ZNF335
GH1
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
RPS18
ICE1
VDAC2
IPO13
NME6
RWDD1
OAZ3
REXO1
MRPS7
GGA3
VPS52
C19orf48
PSMD12
LYRM4
FARS2
SLC35B1
NCLN
SUCLG1
ZNF576
IRGQ
TAOK3
SUDS3
HSPA9
CAPRIN1
FAM187A
EFTUD2
CCDC103
UBE2I
RBBP5
PSMG2
GOSR2
CEP76
UPF2
POLR2E
EXOSC5
BCKDHA
MAMDC2
DCTN1
VARS1
BLCAP
MRPL11
MRPS5
NUP205
HADHB
HADHA
HMGB1
STAM2
CDC73
ACTR10
COX7A2L
PSMD1
POLR2J3
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
SART3
ISCU
SKP1
PI4KB
RABGGTB
SUPV3L1
USP1