ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018228 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◣ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H3C15
H3C14
H2AC19
H2AC18
COX20
VPS28
VEZF1
H2AZ1
DNAJB14
B3GALT4
RPS18
VPS52
ZC3H10
RPL41
RRP36
MEA1
IDI1
FRG2C
SYNRG
FAM174C
GH1
RABL6
COL23A1
NECAB3
POLR2J3
H4C14
SCRIB
ZNF276
VPS9D1
EDC4
ZNF34
RPL8
KMT2A
POLG2
ZNF581
ZNF580
DONSON
SEC31A
TLCD1
NEK8
PHF23
DVL2
INPP5E
STUB1
JMJD8
ID2
EPN1
SNAP47
H3-3A
MAZ
DPH7
UBE2M
CHMP2A
RNASEK
C17orf49
CUL7
H4C15
MUC1
TARS3
SNAPC5
ENAH
PCDH9
OTUD7B
FRG2
PRRT2
PAGR1
PIP4K2B
TMEM132A
HYI
NUMBL
ACP4
ZNF862
MMP24OS
MMP24-AS1-EDEM2
NANOS1
NUDT4B
NUDT4
NRAS
GPAA1
EXOSC4
DNAJC9
ZNF513
ADNP
RIT1
AKAP8
GGA2
ANKRD54
H2BC5
H1-4
ADARB1
ULK3
DYRK1B
TMEM230
AMDHD2
ABTB1
ZNF653
CABYR
HNRNPU
BCAP29
ORAI3
SUMF2
RPL17-C18orf32
RPL17
C18orf32
MEMO1
GCN1
NAXE
PCNX2
MTHFS
RAB4A
MTRF1L
H2BC21
H2AC21
H2AC20
MAN2C1
HIPK1
CTNNAL1
ARHGAP4
CHAF1B
SECISBP2
DLG4
ACADVL
FNBP1
CHD2
TAF10
RRM2
RCOR3
ID3
SDCCAG8
CEP170
PYGO2
LOC101928120
ZNF865
CXorf38
ST3GAL3
MPDU1
LOC100996842
CD68
SH3BGRL3
PRR7
FOXP1
MAML1
BMI1
COMMD3-BMI1
COMMD3
SLC25A10
CCDC138
STIMATE-MUSTN1
STIMATE
H3C13
H2BC18
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TOM1
FAM199X
AKAP5
POGZ
WDR48
SCN11A
DENND4B
CASP6
MORF4L1
AKT3
LMBR1
FBXL3
ATP5F1E
PPP3CB
KLF9
ECI1
PRRC2A
AIF1
TYMP
SCO2
DHRS11
TRIM8
MORC3
SYCE2
MRPL40
HIRA
VANGL2
SMIM19
SLC20A2
KIF27
RUFY2
NCOA7
LAMTOR3
SEC61A2
PABPN1
SRSF11
PPFIA4
ZFAND6
GPR180
KLF12
KRBA2
ZNF398
GPS2
C7orf26
GTF2IRD2B
GTF2IRD2
PCBP4
AGK
MAPK8IP3
EXOSC6
C6orf226
DPY19L4
ADCK2
RABGGTA
SIMC1
CACFD1
NCAM2
FAM76A
SPATA1
GNG5
IL10RB
SLC25A42
LATS1
PHIP
C17orf75
STC2
PEX7
RNF139
PANK3
RPEL1
OAZ1
LRRC37A3
ATXN7L2
HOXA4
RABGAP1
HMGN2
RBM26
FAM219B
ZNF326
SCAI
NBPF1
KDM3B
AGO3
PRRC2B
EDEM1
PHF1
FLOT2
KAT6A
ACBD6
FAM131A
POMZP3
SMYD2
TBK1
REV3L
TIMM13
SLC25A22
ZFP37
FSTL3
STRIP1
KANSL1
LSS
ARHGAP35
EPB41
GPX1
B3GALNT2
OPN3
CHML
SLC44A5
H4C2
H3C2
H2AC4
TM2D3
DERA
ATXN7
KANSL3
FER1L5
H2BC11
H2AC11
SOD2
ACBD3
H1-2
CELF1
DESI2
POMT1
UBXN2A
ZNF197
TADA1
USP21
EGLN1
NME3
MRPS34
EME2
CLK3
CIRBP
AMDHD1
POLR2C
PDCD2
CNIH4
NDUFB2
ZNF445
GATA2
PACS1
DAPK3
BOLA3
TEX38
ATPAF1
ADIPOR1
AKT2
HFM1
H4C5
CCDC106
SLAIN1
TMEM223
TMEM179B
PHACTR2
ADAM17
SCAMP3
ATAT1
SKIDA1
MSI2
CD320
STMP1
ARHGEF11
PPP4R2
EPM2A
YBEY
MCM3AP
BACH1
UGT1A3
PLPP5
NOXA1
TRIM65
NEIL1
HDAC10
KIAA1522
KMT5B
ZNF148
CCZ1B
NDST2
NUB1
ABL2
UCKL1
TRIM3
BRAF
LRRC24
C8orf82
TMEM35B
RHOU
MLLT6
EFCAB2
PXK
FUT11
TP53BP2
FARP2
C8orf76
WIZ
FBXO28
PRKAG1
DDX59
WDR37
PEX6
SEC22C
NKTR
C1orf21
PYCR2
PIN4
LRRC61
ACTR3C
IKZF4
GOLGA1
CLN5
OCRL
FOSL2
FBF1
UNC119
TBC1D5
DENND2B
TTC21A
GORASP1
KCNJ4
VARS1
ACADM
SSRP1
P2RX3
TOMM20L
C5orf24
NFAT5
MYLPF
SUPT4H1
LIN9
TBC1D10B
CCDC200
E2F3
PWP2
LOC102724159
TPTEP2-CSNK1E
WDR27
C6orf120
MIER1
LIX1L
SRSF4
GDI1
PRKAG2
GGPS1
ARID4B
TPK1
ARFGAP2
B4GALT7
DISC1
ARL5A
TSPAN10
NPLOC4
RNF220
TMEM184B
LRRFIP2
RAD23A
BAG2
KHDRBS1
CISD3
GAGE2A
CAMTA1
ZNF786
E4F1
FAM20B
TIRAP
SATB1
TPGS2
DNAH14
TRAPPC8
MAN1A2
PATJ
MARCHF7
COX5A
WDTC1
MOV10
PARP1
THAP9
H4C3
H1-6
FAM118A
KMT2C
CZIB
AP1S2
RAP2C
ZNF621
IMPDH2
JAK1
VPS36
CKAP2
TNFRSF6B
C19orf53
SLC35E3
ICA1L
LMO7
MYBL2
KCTD3
NADSYN1
DHCR7
GPR137
ZNF341
GTPBP3
ANO8
GATAD2B
EXOG
COPS7B
PDE6D
CMTM6
TICRR
ZNF35
TRAF4
ROM1
EML3
MKRN1
SMARCD2
MPC2
DCAF6
BTBD1
HNRNPF
MAP3K2
MPP5
REEP2
URB2
TAF5L
GET4
SRCAP
LOC730183
ZNF76
TMUB1
FASTK
AGAP3
GAB2
SIRT7
ERLIN1
RAD54L2
SP1
TASOR2
ZNF771
PHC2
EYA4
CDC42BPA
NF2
SLC37A3
RILP
ARID3B
THRB
NCR3LG1
SNX5
MGME1
ATRIP
HEBP2
AMMECR1L
PRKRIP1
SP3
ZNHIT2
TBXAS1
HIPK2
CAPZA2
TM7SF2
POM121C
PURA
NUDT16L1
TXLNA
ACAT2
LRRC37B
YWHAZ
ZNF77
TIGD3
PITPNM2
PAM16
PSMA4
GTF2I
CAPN7
CCSER2
MRPL28
CCSAP
MAT2B
HGSNAT
DNAJC11
CCDC130
SQSTM1
MGAT4B
FOCAD
TAOK2
RABIF
PPP1CC
ARHGEF12
EZH2
GANAB
SETD6
UBA2
CUL1
DOCK7
NID1
BRWD1
PIP5KL1
TLL2
MTARC1
DSG2
CD276
SETMAR
CSTB
NAT10
NCKIPSD
NOTCH2
TBC1D4
LLGL2
ZBTB37
STAU1
PUM2
GPC4
PCBD2
CSKMT
C11orf98
KANSL1L
SAMD1
THAP3
DBN1
STK40
SPECC1L
DUX4
URGCP
URGCP-MRPS24
KIAA2026
LRRC73
CHUK
ZNF706
GCLC
XYLB
UBA3
ARL6IP5
IQGAP1
RPS11
OVCA2
RNASE10
TTC13
ARV1
KIF23
GMPPB
AMIGO3
MRPL38
HOXA3
IAH1
SEMA4B
FBXW2
KLHL25
DENND11
TFAP4
IBA57
RC3H2
FYN
TTC5
ATXN10
MSX2
CD2AP
MSRB2
CACNA2D3
GPN2
MAD1L1
NOXO1
GFER
UNC119B
SPSB3
NUBP2
STX6
ELOA
CIZ1
ANKRD36B
DHX9
PHGDH
DNM1
MAPK8IP2
PTCH1
FAM207A
FAM149B1
ECD
PBRM1
GNL3
LPGAT1
SUMO2
CCDC107
RPL6
RIPK1
AQP11
FPGS
PTPN11
GALNT2
PDE8A
NUAK1
USP6NL
EIF3CL
EIF3C
SCFD1
USF2
FBXO10
NMD3
VWA7
PHF19
PAFAH1B1
XPO5
POLH
TMPPE
GLB1
RUVBL1
EEFSEC
MFSD14A
ACTR8
UTP4
DERPC
CHTF8
YBX1
MIB1
HDLBP
SEPTIN2
STX7
RALGDS
YWHAB
THSD1
SETD5
LRIG2
FANK1
FAM135A
CELSR3
ZNF644
PRC1
ATXN2
TRIM52
SSX2IP
ACTN2
GINM1
SELENOH
MARCHF6
JPT2
TAOK1
MYCBP2
CTF1
BCL7C
ATXN7L3
SNX7
RTN4
PCSK6
VPS26A
ZNF282
KCTD18
TAB2
ZNF860
OSBPL10
SBNO1
OSBPL1A
H2BC7
H3C4
H2AC7
LMNB1
GAGE2B
PDE4DIP
RFX1
NCOA2
TWF1
UNC5A
NOMO1
MBOAT2
GAGE7
GAGE5
GAGE4
GAGE12I
WDR73
NMB
POGLUT3
STON2
CAPRIN2
DCUN1D4
SH3D19
NFKBIA
LONP1
CATSPERD
NANS
C20orf144
ACTL10
TPM4
CYREN
IMPACT
IL13RA1
ZNF629
DCT
RECQL4
LRRC14
ZMYM4
RANBP17
SLC44A3
C1orf198
TTLL4
ARSB
COG2
CEP350
TLCD3A
DGKH
MGRN1
DEK
UBE2R2
RNF180
FDX2
ROGDI
CUL9
CTNNB1
ZFYVE9
SMARCB1
FAM53C
CDC25C
DTNBP1
TLE4
UBE2J1
FGF18
NXF1
PRKACB
NFIB
LTC4S
RPP21
ATP1B1
PNPLA7
MRPL41
AKAP13
PRKD3
RNF135
SRF
MAP2
KLHL22
RAP1A
VARS2
MYL6
NPRL3
N4BP3
H4C4
H2BC6
RALB
STUM
MOCS2
BMP8B
TMEM121B
DIS3L
LRCH2
STYX
CCDC78
HAGHL
SBF2
SH3GLB1
MNX1
DDX17
CSRNP2
NUCKS1
RNF187
POLR2D
RHOBTB1
VDAC3
GTDC1
RNF217
CDK11B
CDK11A
DRAP1
C11orf68
ZBTB2
B3GAT3
HNRNPA2B1
CBX3
TLK1
RP9
NLRX1
NPM3
FGF8
MLXIP
FOXJ3
DEGS1
SLC22A23
RASL10B
TNFRSF13C
TRIB3
HIVEP1
SP2
NADK
ZMYND11
SLC2A11
DLK2
TUBB2A
KAT2B
SNAPC4
MRPS24
HSPG2
RNF38
THAP12
GVQW3
MAPKAP1
SOCS1
TET2
PHLDB2
TIGD1
EIF4E2
TDRD7
HNRNPAB
MTMR3
STOML1
PML
FAM228B
SF3B6
EIF4ENIF1
SPATC1L
EIF2D
THBS3
MTX1
ING5
NOM1
GALNT11
NGLY1
SLC12A5
WIPI1
ZER1
RPAP3
ZNF384
SGPL1
PDXDC1
BMP2K
HNRNPA3
CCDC71
RALA
MAPKAPK2
TMEM120A
IGF1R
CEMP1
PKNOX1
FEZ2
ODF3L2
PIAS1
PSPC1
RTN1
FAM122C
FAM122B
CNOT11
SEC16A
C9orf163
PDCD4
KIFBP
RAB11FIP2
TMEM129
TACC3
SMARCC2
KCTD1
ZFR
NEXN
C14orf28
UPF3A
C7orf25
MTG1
BPTF
SPTSSA
NEK7
B4GALT6
MRTFA
U2AF1L5
U2AF1
BAZ1B
KIF7
CDH24
NKIRAS1
SLC12A6
NR1D2
HUS1
NPTN
ZBTB44
SPATA9
RHOBTB3
DIPK1A
UBE2A
HSF2
HPCA
ZEB2
ZBTB12
EHMT2
C2
SFT2D3
ADSS2
NUDT3
PHC1
NPHP3
GSN
RAB14
ADAP2
GIGYF2
VTI1B
SRA1
CALM1
METRN
SORT1
HP1BP3
ZNF740
CSAD
TATDN2
JUP
TOR1B
VANGL1
STX17
NCKAP1
ZNF584
CCDC88A
ZNF652
HLCS
TCF7L2
PRRG4
FZD2
STAP2
MPND
CEP120
ZBTB24
ZNF24
INPP5K
KAT8
HMGN1
CHD1L
SPIN1
UBTD2
C9orf40
PRKAA2
PITRM1
SMARCA1
CORO1B
GPAT4
MED14
CFL2
YTHDF2
PTBP1
HOMER2
H2BC4
H2AC6
SPOUT1
ATXN2L
NBPF15
ACOX3
ZBTB20
DEDD
SLC26A6
PRPSAP2
PRPF40B
PSMD3
PGBD5
DUSP14
TOP2B
AP1S3
SEC63
PRSS23
MIA3