ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448666 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◣ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
CCDC200
H2BC4
H2AC6
FRG2C
MTRNR2L2
MSH3
DHFR
MTRNR2L1
SYCE2
ZC3H10
RPL41
DHPS
DUX4
H2BC11
H2AC11
H4C9
C6orf226
JUNB
MUC3A
PHF1
TMEM107
H2BC5
H1-4
H4C12
EPN2
PHF23
DVL2
SLC38A2
B3GALT4
RPS18
NDUFAF3
DALRD3
MTRNR2L8
SNX16
IER3
FLOT1
MID1IP1
FRG2
H2BC12
H2AC12
IFITM1
IFITM3
UBE2M
CHMP2A
H4C3
H1-6
GADD45B
C19orf53
FIBP
CCDC85B
RPL17-C18orf32
RPL17
C18orf32
ZFP36L1
H3C15
H3C14
H2AC19
H2AC18
EDC4
ID3
H4-16
H2AJ
KRBA2
H4C2
H4C1
E2F3
MSH4
C12orf57
SUMF2
ARHGAP39
H4C11
ARHGDIA
DNAJC9
STX10
IER2
IER5L
SYNRG
NADSYN1
DHCR7
RCC1
JMJD7-PLA2G4B
JMJD7
SCRIB
MAZ
ATAT1
IFITM2
NRAS
PRKRIP1
SSC5D
NAT14
H4C7
H3C7
H2BC9
RHOB
SNAPC5
VPS28
H1-2
MRPL53
NOP53
FTH1
H2BC21
H2AC21
H2AC20
PDE4A
VEZF1
COX20
RPL22L1
SIRT7
POLG2
CHD2
TMSB4X
WDR74
HES7
ALOXE3
CAPNS1
ZNF34
RPL8
KMT5B
RRP36
MEA1
NAT10
H2BC8
H2AC8
DDIT4
TUBB
PFDN5
MYG1
DDAH2
IRF2BP2
ARFGAP2
ADM
ZNF581
ZNF580
TRIM8
MPDU1
LOC100996842
CD68
HMCES
FAM131A
AMDHD2
STAG1
KIF2C
SNX14
UBTF
ZNF446
H3C12
H2BC17
H2AC17
SIX5
SAR1A
MRPL40
HIRA
RPL13
FADS2
FADS1
GPN2
SLC35E3
HPDL
HMGN2
RPS2
NDUFB10
RNF151
CSKMT
C11orf98
UQCC3
LBHD1
CIRBP
INPP5E
GGA2
ABTB1
PRKAG1
H2AZ1
DNAJB14
CUL7
PSMG1
GTF2A2
CXorf38
CDKN1C
CITED4
RIT1
SLC3A2
ZBTB45
C5orf24
H2BC7
H3C4
H2AC7
PHLDA1
ARID5B
MT2A
TUSC2
IKBKG
G6PD
UBB
SLC25A39
H3C2
H2AC4
RAD23A
FAM228B
SF3B6
WDR90
AKAP8
VTI1B
TNFRSF12A
THOC6
HCFC1R1
RPL10
PRAF2
PYGO2
LOC101928120
ZNF653
PFN1
RNF167
SLC25A11
ENO3
MST1
DUSP2
ASTL
PCBP4
FLOT2
MOV10
TUBB4B
FAM166A
SLC39A7
RXRB
HSD17B8
RING1
CCDC107
WBP1
INO80B
CEBPB
S100A6
H2AX
HMBS
ARHGAP4
POMZP3
VWA7
SECISBP2
PRRT2
PAGR1
TRIM41
PHF8
MT1M
MT1E
RPS28
NDUFA7
PNMA1
TOB2
RAB40C
CYRIB
FTL
IGF2BP3
STUB1
JMJD8
WDR6
APOM
PCBP1
GPANK1
C6orf47
CSNK2B
METTL8
DCAF17
JADE2
PATZ1
H3C13
H2BC18
RPS23
ATP6AP1L
PHLDA2
PCF11
TYMP
SCO2
IRF2BP1
SH3BGRL3
CDK11B
CDK11A
RPS11
H4C5
GAPDH
ID1
H2BC15
H2AC15
ROPN1L
THOC5
SFN
KLF6
DHRS11
DYNLL1
GMEB2
TRMT112
PRDX5
ARL6IP4
RABL6
NXF1
ACTN4
RNASEK
C17orf49
TMSB10
LRRC24
C8orf82
ATF4
TCTEX1D2
CCDC24
PDCD2L
SCAMP3
SFT2D3
TEDC2
DUSP5
EPN1
FIGN
CCND1
CCDC34
H3C1
H1-1
RGL2
ISL2
TLE3
MDP1
CHMP4A
ZNF35
PHOX2A
SPEN
SRSF11
DAPK3
GSTO2
ZNF48
NOLC1
ELK1
COL23A1
MAD1L1
FUT11
TRIM37
SRSF4
CD79A
N4BP2
SP3
PNRC1
ING1
HNRNPA1
CBX5
TFAM
H3C8
H2BC10
MAML1
RCC2
LMNB1
FDX2
ANTKMT
CCDC78
COX18
IGF1R
QSER1
SNAPC4
MTA2
TIGD5
EEF1D
FSTL3
SPOUT1
C1QTNF8
ANKH
IQCG
NANOS1
LMLN
LDHC
ZFX
CD320
MRPL28
LONP1
CATSPERD
PIM2
C16orf46
HMGA1
MTIF3
LRP8
EIF1
WDR38
DNAJB4
ZCCHC14
PNPLA6
H3C10
H2BC13
H2AC13
RPS15A
KLHL11
DPH7
LENG9
TBC1D3L
TBC1D3K
TBC1D3J
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
H4C8
TRIM45
ISY1-RAB43
ISY1
ETV6
SNAP47
SLC25A10
LARP1
MLLT6
BCL6
INPP5K
NPDC1
ENTPD2
MAN1B1
CDK16
GATD3B
GATD3A
CCNT1
SHOX2
RSRC1
FANCC
TNFRSF6B
UCKL1
H4C14
H4C15
GPAA1
EXOSC4
TMEM230
XRN1
MATR3
GINS2
SEMA4C
PPP1R37
CENPA
FAM117B
LINGO1
DONSON
STYX
PWP2
LOC102724159
LAMP1
GRAMD2A
POLR3D
RANGRF
GMPPB
AMIGO3
NDST2
CDH24
FAM72B
TPCN1
IQCD
CAMK2N2
YY1
SF1
ADK
POLD1
BORCS6
GTF2A1
APOLD1
SEC14L1
ZNF782
IRX3
AJM1
TNS2
WBP1L
RPL27A
SLC50A1
DPM3
SLC6A9
CDKN2A
GINS3
RPS29
MYL6
TBR1
GAS2L1
PTMS
LAG3
OAZ1
SCFD1
TLCD2
PANK1
MAP3K1
FAM89B
EHBP1L1
ATXN2
ZNRD2
PSEN1
VGF
P2RY11
ZBTB2
CEP192
TOM1
ABCB6
IFRD2
DYRK1B
ACTRT3
MYNN
SMTN
IMPDH2
ACVR2B
MAPK8IP3
MAPKBP1
PAIP2
SPATC1L
BAG2
ARF3
MTMR10
C8orf37
TAS1R3
GANAB
FBF1
SMIM29
JUN
TLL2
KRT10
C1orf56
CCDC106
ZBTB22
TAPBP
CRK
LRFN4
TIMM13
URGCP
URGCP-MRPS24
ARID1A
ORAI3
TBK1
VARS2
CCDC138
WDR97
MAF1
NUDT17
DENND5B
SURF6
SAMD1
C19orf67
PXDC1
RPUSD1
CHTF18
ZNF276
VPS9D1
C19orf71
BASP1
SORBS2
SAT1
RAB23
NPM3
FGF8
AGO3
SERINC4
HYPK
WDR24
FAM76B
CEP57
GCN1
HAX1
SIGMAR1
CYC1
ARID3C
C1QBP
ABCA7
UBC
HDAC10
CALM2
RAB1B
MED10
PKM
ACOX3
NCOA5
PMS1
ORMDL1
USP22
TRIM25
RHOT2
PRMT3
DMPK
DRAP1
C11orf68
LLGL2
USP34
TSC22D1
ZBTB12
EHMT2
C2
MLXIP
MRPL12
SMG9
NOL3
POLB
TEX45
KAZALD1
PTP4A1
ZNF513
TTC33
H2BC14
H2AC14
PHF10
ARF6
E2F5
CSGALNACT1
ICA1L
MVB12A
SETD5
SGF29
COX8A
TBXA2R
NME6
TMEM223
TMEM179B
CELF1
KIF27
CEBPA
PRKDC
MCM4
PLEKHN1
PIP5KL1
ROMO1
PTAR1
MYC
PXDN
CHD7
CTNNAL1
CS
CRELD1
SNX5
MGME1
KLC2
JUND
SLC30A7
EXTL2
BAZ2A
EFCAB13
MNT
CNOT3
TAF10
GPR137
BAD
CEBPD
VAV2
ATP5F1E
KMT2E
TMEM243
DPP3
KLF9
GDF15
MMP24OS
MMP24-AS1-EDEM2
SELENOH
MLX
COASY
CLN8
HAGHL
PTPN6
YWHAH
SLURP1
RRS1
ADHFE1
TGIF1
GTF2IRD2B
GTF2IRD2
MARCHF6
OVCA2
CUX1
PGGT1B
PIP4K2B
SPHK2
H3-3B
ADAT1
TXN2
ILF3
ZFP36
PLEKHG2
FOXO3
TRADD
HSF4
FBXL8
SLC39A1
CRTC2
SQSTM1
PMM1
TTYH2
H3-2
TCIRG1
BCOR
USP8
LRPPRC
LRP6
CASP6
RECQL4
LRRC14
YAP1
SRSF2
MFSD11
AQP11
MTFR2
BCAR3
MKNK2
ZNF143
EIF4A1
CHD5
ARID2
LPCAT3
NAPRT
RILP
C8G
FBXW5
USP3
SLU7
PTTG1
NME3
MRPS34
EME2
CCDC97
LRP2BP
ANKRD37
VEGFB
DNAJC4
TRPT1
NUDT22
NEIL1
LIFR
CPT1A
TLCD1
NEK8
SGK1
NTN3
PCMTD2
TBC1D24
PLPP5
SLC25A28
SEMA4B
CXCR4
VPS4A
UBE2C
HDAC7
RUNX1
POLR2H
CLCN2
GET4
ANAPC4
TUBA1B
SLC35B2
FBXO31
MAP1LC3B
NFIB
CYTH1
MTCL1
CXCR5
THAP7
RASD1
FBXL14
MYOZ3
H1-10
ZNF217
TCIM
PERP
NKIRAS1
FAM83E
RPL18
FNBP1
NDUFS3
KBTBD4
HOXA3
RPL15
HOXA5
ZNF696
HOXA6
CDC6
UNC13D
LBR
GADD45A
DCAKD
TSFM
C16orf71
ANKS3
PHF14
DCTN6
ACP4
NOXO1
GFER
APTX
ARID1B
NARF
MRGBP
GABARAPL1
ZFP64
MACIR
ETV4
TAF9B
MT1X
RNF225
SRA1
MROH6
PRPF38B
BCAP29
RABGEF1
RAB26
TRAF7
SORT1
REEP4
DPH2
B4GALT2
ATP6V0B
USF2
RPRML
TRIM47
GRK6
FUT8
TAF4
STK19
DXO
ANKRD12
FAM199X
KPNB1
TAF2
TMEM132A
TRIM52
TRIM3
GABARAP
JOSD2
ASPDH
LDHA
TUBGCP6
AGAP11
ADIRF
CFD
CSNK1G1
TMUB1
FASTK
XBP1
AGBL2
HYKK
INPPL1
SPRY1
FOSB
ELOVL1
STXBP3
ZDHHC5
CDC20
RABGAP1
MFSD3
CLIC3
TIMMDC1
SOGA1
SMG7
SELENOI
ADGRF3
SERF2
ELL3
TTLL3
THEM4
INO80D
CCDC169-SOHLH2
CCDC169
SDC1
SRCAP
LOC730183
MIF4GD
SPTAN1
SLC35A2
FERMT1
OTUD5
DLX1
PHIP
SETD6
NFATC3
C1QTNF6
RCE1
PDF
CHEK1
ARPC3
C17orf98
PPP1R15B
WDR62
THAP8
ZBTB25
ZBTB1
RHOQ
ATP6V1E2
RPS15
TFAP2A
ABHD10
MAMDC4
SINHCAF
SELENOO
HSPB1
XXYLT1
CTPS1
CLDN7
SRRT
ADAMTS10
LRRC73
RPL19
SMAGP
TTC3
PIGP
CRACR2B
YIF1A
TMEM151A
SPPL2B
LSM7
NAA35
TMEM158
GATAD1
RUNX2
ABHD16B
SIAH2
MFN1
MUC1
ARSB
NR4A2
LONRF1
EXOSC6
RBM4
NUDT16L1
TFAP4
MRM1
BRWD1
WDR27
C6orf120
CCDC130
IAH1
IL17C
FNDC3B
UBL4A
LAGE3
C7orf26
C7orf25
GOLPH3
RARS1
BRD3
TXNDC5
LBX2
ELOVL6
PCGF1
HNRNPF
ZNF451
TNFSF13
SENP3
DDX56
IL34
EXT1
POLR2J3
JPT2
RRAGC
LTC4S
MPHOSPH8
DNM2
SLC16A3
ZNF865
RPLP2
PIDD1
RPL37
TBC1D22A
RHOV
CIPC
CARD6
ZSCAN31
RPL7
RDH10
SFXN4
COA6
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
ARRB1
MFSD1
SPIDR
STMP1
ZNF584
MICAL3
IFITM5
MAFG
LSM8
RHBDL1
PAK2
WNK1
TYW1
SBDS
POM121C
NR3C1
SEC14L2
EVA1B
PGP
BRICD5
DBP
ABCF3
MADD
COMMD5
SNTB2
CABIN1
GSTT4
GTF3C4
DDX31
NFKBIA
SSH3
FARP2
LRRC46
SPTBN5
SPIRE2