ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
NSUN2
MAPKAPK5
DYNC1LI2
NVL
CACTIN
ICE1
NUP85
PSMD12
MRPS7
GGA3
POLR3F
DZANK1
VDAC2
GOSR2
NCLN
REXO1
OAZ3
C19orf48
HSPA9
BLCAP
NME6
IPO13
POLR2E
SUCLG1
TAOK3
SUDS3
UBE2I
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
ZNF576
IRGQ
FAM187A
EFTUD2
CCDC103
RWDD1
MRPS5
ACTR10
RBBP5
COX7A2L
VTI1B
PSMD1
DCTN1
CDC73
PES1
SEC61B
COMMD1
CCT4
SART3
ISCU
RABGGTB
HADHB
HADHA
UPF2
LYRM4
FARS2
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
MRPL11
PI4KB
SUPV3L1
NUP205
STAM2
SKP1
PNO1
MTRNR2L1
USP1
RPL21
ZRANB2
IER3
FLOT1
PAK1IP1
C6orf52
ATP5MG
PHF23
DVL2
SELENOF
HS2ST1
GOLGA5
B3GALT4
RPS18
VPS52
VARS1
GADD45GIP1
KRBA2
TAF9
RAD17
AK6
ANAPC7
PTGES2
SNAPC5
EIF2S3
RPS27A
CLHC1
PDHX
APIP
NFKBIL1
DDX39B
ATP6V1G2
AXDND1
MTRNR2L8
EIF4ENIF1
MRTO4
EMC1
SMC2
MAMDC2
PIN4
ZC3H10
RPL41
TTC8
IQCG
RPL35A
TMED1
ZBTB37
TM9SF1
RPS11
RPL13A
C6orf226
RPS23
ATP6AP1L
SLC3A2
VPS28
H4C14
PCBP1
ATP5F1E
ADK
AP3M1
H4C15
DPH6
SF3B3
COG4
SCRIB
H2BC4
H2AC6
OR6B2
NDUFA10
RXYLT1
SUMF2
AMDHD2
BICRA
SYCE2
RBKS
BABAM2
NRAS
MRPL38
H4C12
RPL22L1
H4C11
RPS12
GLRX2
DENR
UFM1
WDR74
XPNPEP3
ST13
DNAJB7
OAZ1
DGKZ
RPL17-C18orf32
RPL17
C18orf32
PYGO2
LOC101928120
FAM104A
C17orf80
APOM
BAG6
ARFGAP2
MPDU1
LOC100996842
CD68
CDK12
DDIT4
EDC4
RNF225
PAF1
MED29
MRPL24
GORAB
ARHGDIA
RPN1
PROSER1
NHLRC3
SYNRG
RBM39
PCBD2
ANKLE2
ALKBH5
H3C15
H3C14
H2AC19
H2AC18
HSPA1B
MTRNR2L2
MSH3
DHFR
H4C3
H1-6
GTF3C4
DDX31
H1-2
UBE2M
CHMP2A
DNAJC9
GET4
RPS2
NDUFB10
RNF151
H2BC21
H2AC21
H2AC20
RNASEK
C17orf49
H2BC5
H1-4
PRKAG1
EXOSC6
ABTB1
RGL2
JUNB
DDAH2
RPL12
SIRT7
LAMP1
INPP5E
RPS29
LRR1
SRSF11
LRRC40
ZNF34
RPL8
ZNF276
VPS9D1
TBCK
AIMP1
PHF1
CUL7
CMTR1
RPL7
RDH10
NDST2
CISD3
POLG2
STK36
RNF25
FAM131A
ZCWPW1
MEPCE
EPN1
PRRT2
PAGR1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CNPY2
BNIP3
RIT1
TUBB
RPL10
LMAN2
VARS2
PRKRIP1
RHOT2
SPHK2
FAM83E
RPL18
RPS10-NUDT3
RPS10
C19orf53
ID3
SURF6
NAPRT
TRAP1
PFDN5
MYG1
ZBTB45
ZNF581
ZNF580
TSC22D1
TTYH2
BTBD10
TTC33
RAD23A
GPAA1
EXOSC4
ZNF383
PFN1
RNF167
ENO3
ATAT1
MSH4
TIMM13
RPL19
RRP36
MEA1
CCDC34
POLDIP3
SMG5
TMEM79
SEC11C
H2AZ1
DNAJB14
WDR90
RPL6
RICTOR
AGAP11
ADIRF
GCN1
ACP4
RPLP0
HMCES
HOXA3
HOXA5
SLC39A13
HOXA6
MOV10
ARHGAP11A-SCG5
ARHGAP11A
MMP24OS
MMP24-AS1-EDEM2
OSGEP
APEX1
C19orf71
DHRS11
RPL13
TMPPE
GLB1
CD320
ID1
RCOR3
CLUAP1
C16orf90
SECISBP2
POLR2J3
ARF3
SPCS1
GLT8D1
HES7
ALOXE3
POLD1
ECI1
SF3A3
FUT11
ARHGAP4
ROGDI
DPH7
NOP53
TMSB10
VWA7
LRRC37A3
ACTB
H4C8
PPARA
MRPL34
ABHD8
DDA1
SLC35E3
ATXN2
CENPBD1
H4-16
H2AJ
LLGL2
LRRC24
RECQL4
LRRC14
GABARAP
STYXL1
MDH2
MRPL53
SLC25A10
FTH1
H3C13
H2BC18
HDAC10
STUB1
JMJD8
GGA2
C8orf82
NAT10
JMJD7-PLA2G4B
JMJD7
SLC25A11
CD79A
CELF1
TRIP4
RHOB
STRIP1
POMZP3
COMT
TXNRD2
ZMIZ2
PSMD5
DHPS
SCAMP3
WDR6
EIF4A1
NDUFAF3
DALRD3
FAM174C
CCAR2
C8orf58
H2AC16
H1-5
CYBA
SLC26A11
GPS2
TBC1D13
MAZ
BAZ2A
SRRT
NDUFS3
KBTBD4
LDHC
NDUFS7
NUF2
MAP2K2
ARHGEF1
PUF60
TMEM107
COMMD2
PNMA1
H4C2
H3C2
H2AC4
RPL37
H2BC11
H2AC11
MRPL40
HIRA
GTF2IRD2B
GTF2IRD2
ADPRHL1
SLC39A7
RXRB
HSD17B8
RING1
CRELD1
SIGMAR1
ARID3C
H4C1
H3C1
H1-1
NOP14
GRK4
SIX5
DRAP1
C11orf68
LIFR
CDK11B
CDK11A
NECAB3
SELENOH
ABCB6
TSPAN10
NPLOC4
XRN1
TUBA1B
PDCD6
GNG3
BSCL2
ERCC1
LRP6
CS
DPY19L4
TCHP
C5orf24
TATDN3
NSL1
NPAS4
MAD1L1
RCE1
WDR70
SHMT2
MAPK8IP3
TMEM43
CHCHD4
SCAP
PAIP1
POLR2J
ARHGAP12
GRAMD2A
ZNF446
PIGO
AURKAIP1
ISG20
GPN2
ZNF653
GAPDH
ERGIC2
LBR
DUX4
H4C9
FLOT2
HNRNPU
ZNF341
RNF166
CTU2
ZFP36
CHD2
C12orf57
PTPN6
SDE2
C7orf26
SNX22
ZNF770
TAOK2
PMF1-BGLAP
PMF1
TRIP13
BRD9
SDHA
CCDC127
AKAP8
NXF1
DNAJB12
ABCF1
KIF2C
CCDC138
TMEM267
FBXW9
VPS50
HEPACAM2
NME3
MRPS34
EME2
THOC5
NFAT5
NCBP3
DIDO1
SMN2
SMN1
SHTN1
SCAMP5
SSBP1
CSNK1G1
ERCC6L2
H2BC12
H2AC12
MATR3
LMLN
CUL9
ECHS1
GOLM2
WDR47
TMEM39B
H2BC7
H4C5
CHD8
TMSB4X
BCAP29
POLR2C
PCBP2
EHMT1
SLC39A1
CRTC2
C16orf46
PACS1
GBA
RAB5B
COX20
ZDHHC23
MARCHF6
RUVBL1
ASXL1
MTF2
EEFSEC
CCDC43
TOM1
ORAI3
PURA
ANKFY1
SPATA25
NEURL2
CTSA
ARMH3
NELFA
GSTA4
CTNNB1
DSTYK
TOMM20
SMDT1
GRB2
LPCAT1
CCDC86
MYO18A
THEM4
SMIM29
IREB2
TRMT2A
RANBP1
ZNF511
TUBGCP2
GADD45B
NME4
DECR2
TXN2
EIF2D
GPANK1
C6orf47
SPATC1L
CSNK2B
GAA
MTIF2
RAB3IL1
ROPN1L
MEMO1
OTUD7B
B4GALT7
SKA3
MRPL57
TLCD1
NEK8
PTCD1
CPSF4
LRRC59
TAF2
CDC5L
MDM4
DCXR
SLC15A4
RMI1
HNRNPK
ADM
TCF3
AHRR
OSMR
NOLC1
ANTKMT
CCDC78
NOP2
DRG2
EXOC3
PDCL3
PRICKLE4
FRS3
ILF2
MAPKBP1
TUBGCP6
ATXN7L2
RAD9A
EIF3F
MRPS23
CIRBP
CYRIB
ULK3
HYAL1
SLC39A4
CPSF1
NAA80
HYAL3
PCBP4
NDUFB2
CHD1L
PRKAB2
RPS28
NDUFA7
RAB26
KRT8
TRAF7
TRAF4
SLURP1
NT5C
KRT18
TAS1R1
NOL9
TRIM37
FBF1
GPX1
WDR31
RPP40
ZNF286A
BRIX1
BHLHE40
NSFL1C
KLHL12
TGOLN2
TNFRSF12A
THOC6
HCFC1R1
JOSD2
ASPDH
ICMT
CLCN7
SLC29A1
GSTO2
TSFM
MCOLN1
TMEM139
CASP2
RNPS1
VEZF1
SNAP47
MADD
CALM1
JMJD4
KLHL15
AGL
AFF4
SLC50A1
DPM3
ZNF76
BAX
CLPTM1L
CYB561
GATD3B
GATD3A
GNE
TOMM6
ZNF583
USP21
CSRNP2
DCP1A
CD63
HASPIN
IRF9
SSX2IP
ANKRD13C
LTBR
ENDOV
HMGB1
NOTCH2
EIF4H
USPL1
TDP2
ACOT13
SFXN4
SYT7
GABPB2
RPLP1
RIPK1
PLEKHG2
RSAD1
WDR11
MED1
MAN2C1
H3C8
H2BC10
CCDC130
AKAP1
CEP350
SLC45A4
FIBP
CCDC85B
UPF3A
PABPN1
ABCF3
CEMP1
RBL1
FKBP5
SNTB2
SIRT4
NOC3L
AGO3
SUGCT
MPLKIP
TMEM223
TMEM179B
GADD45A
ATAD2
RABIF
AMZ2
B3GAT3
IFI35
KDM6B
FAM162A
CCDC58
WASHC2A
TMEM170A
RPS26
HNRNPA1L2
PRSS8
CXorf38
PRDX1
CIAO3
FIS1
NR4A1
ATP6V1H
ENOSF1
DNAJC25-GNG10
DNAJC25
NAA60
MBTPS2
H2BC8
H2AC8
MLXIP
FAM156B
FAM156A
TMEM249
SLC52A2
FBXL6
BRWD1
LARP1
YAP1
TIPIN
SH3GL1
CHAF1A
CAPNS1
INPP5K
SLC35B2
KAT6A
ZNF296
GEMIN7
CBWD5
CBWD3
CBWD6
MTERF4
NOC4L
DDX51
DAGLA
ERBB3
SH3BGRL3
HAX1
RASA4B
HSPB1
YARS1
S100PBP
RRP1
MET
PGAM5
MRPS18C
HELQ
KMT2A
ZNHIT2
MRPL49
FAU
TONSL
PBLD
HNRNPH3
AMACR
GPRC5A
TRIM8
MVB12A
CLK3
FOXJ3
SCAND1
HIBADH
CCDC24
MRPL28
P2RY11
SRA1
WDR62
THAP8
TAB3
PPP6C
BMF
SGPP1
VPS4A
NUDT4B
NUDT4
DDX56
QRICH1
RRP8
ILK
POLG
ATXN1L
GANAB
TCTEX1D2
STX18
TMEM222
RPP21
TMEM68
TGS1
GTF2H2C
GTF2H2C_2
YOD1
PFKFB2
RBM4
CCDC106
PPFIA4
PUS7
NTMT1
TMEM101
DPY19L3
NADK
NUP133
SMPD1
H4C7
H3C7
H2BC9
PIP4K2B
MTA2
POP5
JUND
DCAF10
MRPL58
FOXRED2
CLCC1
ABCA3
SUPT16H
HELLS
MLX
COASY
MRPL12
JPT2
PMM1
STPG3
NELFB
RRAS2
KIF21A
SNAP29
PI4KA
TSKU
TTC17
JRK
PPP6R1
ZBTB7A
NEK2
C10orf143
TAF10
ATF4
PDF
MROH6
CNOT6
SOCS3
MED23
BANP
TBL3
SEC31A
FDX2
ADAT1
IPO9
CBX2
CCDC200
NANOS1
DENND4B
DNLZ
COX5A
ZNF131
SERTAD1
UHRF2
TMEM132A
ZFP36L1
ZFX
H3-2
MTARC1
LRRC8D
GGA1
BPTF
ZYG11A
ARFGAP3
TAF13
VCP
SLC24A1
COG2
UBE2J2
SPIRE2
PSMG4
AKIRIN1
ZBED3
ADGRL1
NAPA
IDI1
WDR37
TBL1X
HDHD2
TJP1
CYBC1
KCNK1
GTF2A2
SRSF4
MRM1
ADAMTS10
LUC7L2
FAM207A
TM7SF3
BICD1
PARVA
L3HYPDH
JKAMP
ZBED5
SNX29
C16orf70
RFX1
MKRN2OS
MKRN2
ZFAT
ACTG1
NFYC
PGAP6
CDK5RAP1
ARHGEF5
OTULIN
TJP3
TRA2B
MRPL45
MRPL3
CELSR3
HNRNPUL1