ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441335 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◣ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

RABL2B
RABL2A
TSN
ZNF335
MAPKAPK5
DYNC1LI2
SRD5A1
NSUN2
NUP85
VDAC2
REXO1
CACTIN
POLR3F
DZANK1
PSMD12
ICE1
IPO13
OAZ3
RWDD1
NVL
CAPRIN1
NME6
HSPA9
NCLN
MRPS7
GGA3
POLR2E
GOSR2
SLC35B1
ZNF576
IRGQ
SUCLG1
FAM187A
EFTUD2
CCDC103
C19orf48
PSMG2
CEP76
LYRM4
FARS2
UBE2I
UPF2
DCTN1
MRPS5
MRPL11
ACTR10
VTI1B
COX7A2L
PSMD1
TAOK3
SUDS3
BLCAP
COMMD1
CCT4
EXOSC5
BCKDHA
VARS1
RBBP5
STAM
CDC73
SEC61B
SKP1
RABGGTB
SART3
ISCU
STAM2
PTGES2
TSNAX
HADHB
HADHA
USP1
PI4KB
PES1
ATP5MG
ZRANB2
SNAPC5
PDHX
APIP
TAF9
RAD17
AK6
RPL21
NDUFA4
EIF2S3
PAK1IP1
C6orf52
FARSB
PDAP1
BUD31
RPL17-C18orf32
RPL17
C18orf32
NUP205
SUMF2
PNO1
SUPV3L1
MRPL24
SELENOF
HS2ST1
B3GALT4
RPS18
VPS52
POLG2
AXDND1
VEZF1
ZC3H10
RPL41
TM9SF1
RPS27A
CLHC1
TMED1
GADD45GIP1
EIF4ENIF1
NFKBIL1
DDX39B
ATP6V1G2
PIN4
ATP5F1E
ANAPC7
GOLGA5
GCN1
SMC2
C6orf226
DPH6
RPS23
ATP6AP1L
APOM
BAG6
IQCG
RPL35A
MRTO4
EMC1
RXYLT1
EPN1
BICRA
MAMDC2
ANKLE2
EDC4
RIT1
TTC8
FAM131A
HSPA1B
COX20
SCRIB
RPS12
PHF23
DVL2
AMDHD2
SECISBP2
IER3
FLOT1
NRAS
PCBP1
FAM104A
C17orf80
KRBA2
RBKS
BABAM2
TBCK
AIMP1
H2BC4
H2AC6
H2AZ1
DNAJB14
OR6B2
NDUFA10
H4C14
AKAP8
UFM1
WDR90
TLCD1
NEK8
C19orf53
PAF1
MED29
TBK1
H4C12
ZNF383
MRPL38
MAZ
MPDU1
LOC100996842
CD68
TMPPE
GLB1
DAPK3
SF3B3
COG4
BAZ2A
H4C15
RRP36
MEA1
CNPY2
ADK
AP3M1
GRAMD2A
DGKZ
RNF166
CTU2
PROSER1
NHLRC3
LAMP1
DDIT4
TMEM132A
RPS29
LRR1
TIMM13
RPN1
PCBD2
XPNPEP3
ST13
DNAJB7
NANOS1
ROGDI
CUL7
ZNF34
RPL8
NAT10
GTF3C4
DDX31
H4C11
SEC31A
DENR
CDK12
NAPRT
H4C3
H1-6
GET4
DNAJC21
OSGEP
APEX1
SYNRG
RPS11
RPL13A
PRKAG1
GLRX2
INPP5E
ECI1
UPF3A
NOLC1
CCDC34
H1-2
DPH7
UBE2M
CHMP2A
MAD1L1
FBXO4
ALKBH5
PFDN5
MYG1
SIRT7
PKD1
SLC35E3
XRN1
AHRR
TUBB
WDR74
GORAB
ATAD3A
RHOT2
POLR2C
PHF1
ARHGAP11A-SCG5
ARHGAP11A
FDX2
CMTR1
VPS28
PRRT2
PAGR1
H3C15
H3C14
H2AC19
H2AC18
RPL7
RDH10
JUNB
TTC33
POLDIP3
SNAPC4
RPL22L1
RPS2
NDUFB10
POLR2J3
RNF151
SPATC1L
RBM39
GBA
C5orf24
STK36
RNF25
ATAT1
DHRS11
IMPDH2
ZCWPW1
MEPCE
MSH4
EIF2D
PNMA1
SYCE2
SRSF11
THOC5
LRRC40
FTH1
RAD23A
DNAJC9
MLX
COASY
STUB1
JMJD8
OAZ1
H2BC21
H2AC21
H2AC20
NDST2
CCDC138
RPS10-NUDT3
RPS10
SEC11C
CISD3
MAPK8IP3
NPM3
FGF8
MATR3
UFSP1
ACHE
ERCC6L2
RCC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DRAP1
C11orf68
SLC25A10
PRDX1
BTBD10
NDUFS3
KBTBD4
SCAMP3
MAP2K2
ZNF341
HAX1
SELENOH
UBC
SLC39A1
CRTC2
EXOSC6
SLC3A2
MCOLN1
TRAP1
ARFGAP2
TOPORS
SMIM27
ZBED8
VPS50
HEPACAM2
ZMIZ2
MAN2C1
ARHGAP4
NDUFS7
CHD2
NUDT16L1
TOM1
CUL9
NME3
MRPS34
EME2
CLUAP1
C16orf90
COMT
TXNRD2
DNLZ
PRKAA1
RABGAP1
CDH24
H2BC5
H1-4
DOHH
RNASEK
C17orf49
TRIM65
ZNF251
RBM4
DUS1L
MAML1
SRRT
FBF1
USP21
COX18
KLHL11
BAG2
ASXL1
RPS19
MOV10
TUSC2
STYXL1
MDH2
NOP2
OSTC
GTF2H2
SPCS1
GLT8D1
GPAA1
EXOSC4
ARF3
GTF2A2
TCF3
TNKS1BP1
RCOR3
PYGO2
LOC101928120
TMEM230
TUBA1B
RHOF
ZNF76
PUF60
DERA
H2BC12
H2AC12
MDP1
CHMP4A
H3C13
H2BC18
EIF4H
ZBTB4
SLC35G6
POLR2A
MRPL40
HIRA
MAPKBP1
RPL27
HMCES
PPP4R3B
PMF1-BGLAP
PMF1
COX19
SMG5
TMEM79
DRG2
HSD3B7
MMP24OS
MMP24-AS1-EDEM2
RICTOR
ACTN4
BNIP3
FZR1
CDK16
RCE1
EHMT1
METTL9
WDR97
MAF1
TUBGCP6
DPY19L4
FBXW9
DENND4B
RUVBL1
EEFSEC
FUT11
CCDC88A
MBD3
SLC50A1
DPM3
ABCF3
NOXO1
GFER
LMAN2
RPS15A
PACS1
SLC39A13
TRIP13
BRD9
PHLDA1
ROPN1L
RARS1
H3C12
H2BC17
H2AC17
CHD8
PDCD6
MXRA7
TMSB4X
DHPS
CXorf38
SELENOO
ANKFY1
VPS4A
PROZ
LRRC37A3
EGLN2
MFSD14A
DIAPH1
ENOSF1
RRAS2
JAG2
WDR24
ADAT1
MED26
GGA2
LRRC24
C8orf82
C7orf25
TXLNA
GDI1
B4GALT7
MTF2
STYX
PPFIA4
SURF6
RPL37
PITPNM2
MTRNR2L1
GAPDH
ECHS1
RAB5B
FAM174C
NECAB3
RILP
WDR73
NMB
IMPA1
ALDOC
PSMD5
GPS2
DUX4
H4C2
H4C1
H3C2
TMEM267
PWP2
LOC102724159
USP3
AURKAIP1
PIM2
ID1
SRRM3
RHOB
TIGD3
C5orf15
SETD6
TMEM101
FAM189B
IFI30
TRIM52
B3GAT3
H2AC4
ZBTB45
BCAP29
GAA
ADPRHL1
HOXA3
HOXA5
HOXA6
H4C8
ZNHIT2
MRPL49
FAU
RAB26
MKRN2OS
MKRN2
NT5C
SNAP47
TMEM150A
JMJD4
H4-16
H2AJ
SLC39A7
RXRB
HSD17B8
RING1
CS
SLC26A11
H2BC11
H2AC11
SMN2
SMN1
SLC39A4
CPSF1
CENPBD1
C12orf73
CD79A
H3-3A
PCBP2
CYB561D1
TSR3
GNPTG
TUBGCP5
NPAS4
JRK
ZNF276
VPS9D1
AGO3
NCBP3
COPRS
TMEM43
CHCHD4
MLLT1
TOR3A
ZNF131
IFITM1
IFITM2
VCP
ZSWIM8
CHCHD1
PNKP
RECQL4
LRRC14
CYC1
CIAO3
FAM222B
COA3
CNTD1
H4C9
TAF10
PPP1R37
ARSG
TOMM20
SPHK2
FAM83E
RPL18
WDR83OS
WDR83
MAN2B1
EFNA4
TELO2
PTX4
ID3
TEDC2
IFI35
TEKT2
ADPRS
VWA7
CTNNAL1
ATXN2
CYTH1
H2BC7
H3C4
H2AC7
NOL7
SLC39A3
MIF4GD
RUFY2
INKA2
DDX20
SLC24A1
NFYB
COPB1
GPANK1
C6orf47
STRIP1
ATAD2
CYBA
PAM16
WDR11
NUDT15
PDCD2L
C7orf26
C17orf75
TSFM
UBA2
MIEN1
LRRC8D
TATDN3
NSL1
BAX
PSMC3IP
ANTKMT
CCDC78
BUD13
RPL12
LRSAM1
FBXL20
NSFL1C
NDUFA4L2
SPOUT1
INPP5K
TSC1
GFI1B
MTARC1
PEX12
SNRPE
RSAD1
TCF25
CDK11B
CDK11A
PDE4DIP
MRPL12
STPG3
NELFB
ERCC5
RGL2
SLC12A6
NFAT5
MBTPS1
NOP10
UBA52
PIP4K2B
ZNF35
TAF9B
UCKL1
PPP1R15B
TBCD
ELL
TMCO1
CCDC97
CHD5
ABCA7
MRPS28
ITGB3BP
EFCAB7
CHUK
ARL6IP1
H4C5
CLK3
ZNF451
BICD2
MPG
KMT5B
FAM228B
SF3B6
GAS2L1
TUT1
STX16
C16orf46
ZBTB22
TAPBP
LENG9
DHRS13
DAXX
ARMC7
TCHP
TMEM107
BRWD1
SAMD1
WDR27
C6orf120
SFXN4
MTHFS
KAT5
C16orf71
ANKS3
ANKRD40
SF3A3
TIPIN
ATP7A
PSMG1
ANKRD12
PTCD1
CPSF4
VMAC
NDUFA11
PLK1
SSBP1
TEX38
ATPAF1
UBE2Z
SP2
PCYT2
C8orf33
TAOK2
TAF2
WASHC2C
CNP
KIFBP
ADI1
ZNF346
MTREX
DHX29
C12orf57
TRIM41
PTPN6
OTULIN
AXL
CCDC24
SKA3
MRPL57
UHRF2
PRKRIP1
PRSS27
MRPL58
CLN6
HASPIN
NR1H3
ACP2
IDI1
NKIRAS1
RPL15
TMEM222
LSG1
IARS1
FRG2C
SLC25A17
NUF2
TMSB10
DYRK1B
CSRNP2
GTSE1
CLPTM1L
CDK5R1
DPP9
SENP1
PFKM
FECH
ABTB1
POLD1
TMEM223
TMEM179B
ULK3
ZZZ3
IREB2
QRICH1
SCAMP5
GTF2H2C_2
GTF2H2C
ARHGEF35
TRMT2A
RANBP1
AGL
CCDC43
CEP72
EXOC3
DNAJA3
SLC25A42
DDX56
DCAF10
STAT3
TAF1D
C11orf54
SEC62
MTRNR2L8
POM121C
H3C8
H2BC10
SRA1
IDH3B
PBLD
HNRNPH3
CHMP6
H3C1
H1-1
GTF2IRD2B
GTF2IRD2
ROMO1
MRI1
PPP4C
USP30
MUC3A
CD320
LRP6
ZDHHC8
MRPS23
THEM4
CCNT1
KRT8
PAFAH2
TMEM139
CASP2
PHKG2
ANAPC4
CCDC169-SOHLH2
CCDC169
LOC100287896
LIPT2
RNF40
CCDC189
FAM89B
EHBP1L1
SSH3
MARCHF7
PRKACA
AMACR
ZNF296
GEMIN7
INTS5
NOC4L
DDX51
KMT2D
PPARA
RNF187
MRPL44
MRPL55
PGM1
TBL1X
FIS1
GMPPB
AMIGO3
TBC1D13
FBXO31
MAP1LC3B
RFX1
KDM3B
ACTR8
MSTO1
NOL11
NXF1
NAXE
ZC3H6
DCXR
C6orf136
CLCN7
AHCY
OGFOD3
HEXD
STXBP4
COX11
GPN2
GPX1
TSPAN10
NPLOC4
FRA10AC1
COQ7
NIPBL
WDR70
TIGD6
HMGXB3
DMAP1
YAP1
KIAA2026
MAPK1IP1L
WDR47
ELK1
RASA4B
SMIM13
FAM207A
SUOX
IL11RA
CYB561
SF3B4
TTLL3
DSTYK
SMARCD1
RFC4
MBD1
EEF2KMT
ST3GAL3
SCAP
SPSB2
TPI1
RMND5B
RPS15
UBB
TRIP4
METTL2B
IFITM3
GSTO2
TOB2
EIF4A1
LUC7L2
FAM219B
RRP8
ILK
SDHA
CCDC127
CHST14
MATN1
TRIM37
SCFD1
TYMP
SCO2
ZNF513
MST1
USP34
IPO9
SLC35A3
NDUFA6
SPAG5
NDUFS6
MRPL36
NR4A1
MTERF4
LSM14A
MTIF2
H2BC8
H2AC8
RIPK1
MRTFB
ZNF668
ZNF646
ISG20
TVP23B
WDR6
MADD
GRB2
SPRTN
EXOC8
ZNF414
JPT2
ARPC3
ELK4
STX5
PDPK1
TSC22D1
DIDO1
TFPT
PRPF31
KANK2
COMMD2
EHD1
KIF11
ADNP
TXN2