ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448664 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◣ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L1
FRG2C
ZC3H10
RPL41
DUX4
PGK1
IER3
FLOT1
H2BC11
H2AC11
H4C9
MTRNR2L8
MUC3A
JUNB
CCDC200
FRG2
H2BC4
H2AC6
PHF1
HES7
ALOXE3
MAZ
PHF23
DVL2
UBE2M
CHMP2A
MSH4
IFITM1
IFITM3
SYCE2
DHPS
SLC38A2
H2BC5
H1-4
SNX16
ID3
NDUFAF3
DALRD3
H3C15
H3C14
H2AC19
H2AC18
B3GALT4
H4-16
H2AJ
MPDU1
LOC100996842
CD68
NAT10
C6orf226
STX10
IER2
H4C12
IER5L
GADD45B
ATAT1
SIX5
RPL17-C18orf32
RPL17
C18orf32
WDR74
ADM
FTH1
DDIT4
H4C3
H1-6
H4C2
H4C1
H2BC12
H2AC12
ZBTB45
TMSB4X
GAPDH
H4C11
RAD23A
RCC1
SYNRG
PSMG1
EDC4
RHOB
RPS28
NDUFA7
KRBA2
C1QTNF8
RPS2
NDUFB10
ARFGAP2
JMJD7-PLA2G4B
JMJD7
C19orf53
SUMF2
MT2A
IFITM2
H2BC21
H2AC21
H2AC20
H2AZ1
DNAJB14
DNAJC9
ARHGDIA
NPDC1
ENTPD2
PRKAG1
SLC35E3
CEBPB
TUBB
COL23A1
UCKL1
C12orf57
GPAA1
EXOSC4
MID1IP1
DUSP2
ASTL
SLC3A2
RPL13
NOP53
ARHGAP39
COX18
VPS28
RIT1
ZNF34
RPL8
ABTB1
CLN8
H4C7
H3C7
H2BC9
RGL2
DAPK3
CCDC24
SLC50A1
DPM3
NRAS
CDK11B
CDK11A
RPL22L1
PDCD2L
GRAMD2A
TRIM8
VTI1B
SNAPC5
FAM228B
SF3B6
RPS15A
UPF3A
H3C12
H2BC17
H2AC17
MRPL28
RCE1
PFN1
RNF167
SLC25A11
SSC5D
NAT14
SLC39A7
RXRB
HSD17B8
RING1
CCDC34
ZBTB12
EHMT2
C2
POLG2
PRRT2
PAGR1
IKBKG
G6PD
P2RY11
KMT5B
H2BC8
H2AC8
WDR38
MT1M
MT1E
PFDN5
MYG1
ZNF48
PDE4A
ZFX
UBTF
VEZF1
H1-2
EIF1
PHLDA1
CHD2
MAML1
ADAMTS10
SECISBP2
ATP5F1E
ID1
GTF2A2
H3C2
H2AC4
CCDC107
PIP5KL1
FAM131A
TMEM230
CYRIB
CXorf38
RABL6
SCRIB
GMEB2
LDHC
PHOX2A
DHRS11
H2BC7
H3C4
H2AC7
NADSYN1
DHCR7
MAPKBP1
HMCES
FTL
WDR97
MAF1
TNFRSF12A
THOC6
HCFC1R1
COX20
WBP1
INO80B
APOLD1
TRIM37
ARL6IP4
AKAP8
IGF2BP3
POMZP3
H3-3B
H1-10
FLOT2
ZNF446
GGA2
YY1
SCAMP3
CIRBP
CUL7
ORAI3
GANAB
WDR6
CD79A
MFSD3
IDI1
PYGO2
LOC101928120
MTA2
IRX3
RRP36
MEA1
H3C13
H2BC18
GPN2
FUT11
H2AX
HMBS
H4C5
APOM
GPANK1
C6orf47
GSTO2
ANTKMT
CDK16
AMDHD2
TMSB10
ANAPC4
RPS11
H3C8
H2BC10
E2F3
TOM1
H3C10
H2BC13
H2AC13
GCN1
SCFD1
ZBTB22
TAPBP
FAM156B
FAM156A
STUB1
JMJD8
RHBDL1
SH3BGRL3
TUSC2
TSC22D1
ARID5B
TIGD5
EEF1D
OPRL1
LKAAEAR1
TUBB4B
FAM166A
ARHGAP4
SLC12A6
LGR6
MAPK8IP3
ELK1
TLCD1
NEK8
DPH7
ZNHIT2
MRPL49
FAU
TUBA1B
ZNF584
ROPN1L
RPS29
SEC14L1
CENPA
MVB12A
SNAP47
NKIRAS1
RPL15
MRPL53
ICA1L
ROMO1
RNASEK
C17orf49
LRRC24
C8orf82
CDKN1C
HNRNPA1
CBX5
ABHD10
UBC
HMGN2
UBB
PRKRIP1
ZNF581
ZNF580
CCDC106
ISY1-RAB43
ISY1
NOLC1
GNE
TMEM134
NPM3
FGF8
CEBPA
MUC1
BASP1
KLRC2
ZFP36L1
ACP4
MLLT6
RPL10
ZNF703
SIRT7
NDST2
HDAC10
PLPP5
MAD1L1
GMPPB
AMIGO3
MYOZ3
CSKMT
C11orf98
UQCC3
LBHD1
C5orf24
ZNF653
OSTC
STYX
TEDC2
SFN
MOV10
PCF11
CAMK2N2
CDH24
H2BC15
H2AC15
MTFP1
TMEM132A
RAB40C
PRMT3
VEGFB
DNAJC4
TRPT1
NUDT22
TBCD
CEMP1
IQCG
LMLN
SRSF11
ADAT1
SSH3
TNFRSF6B
RILP
SP3
PIM2
FBF1
H3C1
H1-1
PCBP4
NFKBIA
EPN1
MFN1
H4C14
DYRK1B
CELF1
GATD3B
GATD3A
NME4
DECR2
CCDC97
TBR1
CKB
DDAH2
KLHL11
INPP5K
PCBP1
RNF223
MDP1
CHMP4A
SCGB1C2
SCGB1C1
WDR90
ATF4
TAF10
TMEM223
TMEM179B
SRSF4
FAM89B
EHBP1L1
TCTEX1D2
PDF
POLB
ABHD16B
PPP1R15B
H4C15
MYL6
SMIM29
RAB5B
CISD3
NME3
MRPS34
EME2
SPATC1L
NR3C1
PTOV1
ADK
CSNK1G1
HMGA1
VWA7
DLG4
ACADVL
ZFP37
SLC39A10
FNBP1
MLX
COASY
GAS2L1
C16orf46
NOL7
TUBD1
RPS6KB1
TTC33
VPS4A
CLIC3
SPOUT1
TUT1
TBK1
MMP24OS
MMP24-AS1-EDEM2
KIF2C
TMUB1
FASTK
CTNNAL1
GPS2
SLC25A17
NFATC3
C8orf76
DONSON
HYAL1
NAA80
HYAL3
C11orf91
BAZ2A
H4C8
XRN1
LARP1
CRK
NUMBL
CHD5
CEP192
CAPNS1
SNX14
KLC2
PHLDA2
GET4
BAG2
CASP6
TNFSF13
SENP3
DMPK
MST1
ST3GAL3
FBXO31
MAP1LC3B
DCAKD
STAG1
C19orf71
S100A6
NOL3
TMEM107
H2BC14
H2AC14
RBM4
ABCB6
NOXO1
GFER
NUDT17
TNS2
UBE2C
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SELENOO
RASD1
DUSP1
CITED4
SRSF2
MFSD11
POLD1
HPDL
CXCR5
C17orf98
ZNF35
TAOK2
MCCD1
ZASP
SAP25
HES3
NXF1
SLC25A39
INPP5E
NECAB3
SELENOH
RABGEF1
GAS1
FAM83E
SPHK2
RPL18
TFPT
PRPF31
NOP2
PLEC
LLGL2
RNF225
POMT1
DPP3
C7orf26
RPL19
MLH3
CACNB1
SURF6
SNX5
MGME1
IAH1
ANKRD12
CEBPD
URGCP
URGCP-MRPS24
TLCD2
RPLP2
PIDD1
ACOX3
PSMB8
NANOS1
IGF1R
LRP2BP
ANKRD37
LENG9
TTLL3
SLC35A2
MAN2C1
RAB26
TRAF7
MYO1G
HAX1
CELSR3
PTPN6
TSPAN31
AGAP2
HSPB1
SLC25A10
MROH6
OR2T1
AJM1
MCRIP2
ZNF865
SHOX2
RSRC1
WDR62
THAP8
ANKRD39
RPS23
ATP6AP1L
IRF2BP1
C5orf15
FADS2
FADS1
MPHOSPH8
TIMM13
TENT4A
MSMP
PYGM
DPM2
SLC25A42
MRI1
CS
TXN2
PTCH1
PFN2
TIGD3
GPR137
PRR7
CRELD1
IL17C
PLEKHN1
OAZ1
ETS2
ABCF3
SLC35B2
WDR27
C6orf120
TEX22
PRAF2
PABPN1
GDI1
ANP32B
RRM1
ZNF517
RCC2
RPL36
RPLP1
ZNF335
GH1
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
RPS18
ICE1
VDAC2
IPO13
NME6
RWDD1
OAZ3
REXO1
MRPS7
GGA3
VPS52
C19orf48
PSMD12
LYRM4
FARS2
SLC35B1
NCLN
SUCLG1
ZNF576
IRGQ
TAOK3
SUDS3
HSPA9
CAPRIN1
FAM187A
EFTUD2
CCDC103
UBE2I
RBBP5
PSMG2
GOSR2
CEP76
UPF2
POLR2E
EXOSC5
BCKDHA
MAMDC2
DCTN1
VARS1
BLCAP
MRPL11
MRPS5
NUP205
HADHB
HADHA
HMGB1
STAM2
CDC73
ACTR10
COX7A2L
PSMD1
POLR2J3
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
SART3
ISCU
SKP1
PI4KB
RABGGTB
SUPV3L1
USP1
PDAP1
BUD31
PES1
MRPL40
HIRA
NDUFA4
FAM174C
ZRANB2
UGT1A3
FARSB
ATP5MG
EPN2
KMT2A
RPL21
EIF4ENIF1
PTGES2
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
ZNF276
VPS9D1
RPS27A
CLHC1
EIF2S3
BRWD1
PNO1
PIN4
PDHX
APIP
NFKBIL1
DDX39B
ATP6V1G2
MRPL24
AXDND1
RPL13A
RNF151
GADD45GIP1
PCBD2
SEC31A
RCOR3
EXOSC6
VARS2
PIP4K2B
PNMA1
ZNF513
CCDC138
ANAPC7
FIBP
CCDC85B
DRAP1
C11orf68
GOLGA5
NOP14
GRK4
BAG6
ENO3
CD320
TBCK
AIMP1
RXYLT1
TMED1
MRPL38
MRTO4
EMC1
SMC2
SNAPC4
ECI1
YJU2
FDX2
IMPDH2
H3-3A
TTC8
RHOT2
PWP2
LOC102724159
ARF3
LAMP1
TYMP
SCO2
GLRX2
MATR3
DPH6
ULK3
OR6B2
NDUFA10
NAPRT
LMNB1
SNX9
LRRC6
SRRT
RPL35A
USP21
BICRA
TOB2
GTF3C4
DDX31
NDUFS3
KBTBD4
THOC5
FAM104A
C17orf80
RABGAP1
SLC39A1
CRTC2
TTYH2
CCDC78
RBKS
BABAM2
AGO3
RPN1
DENR
KIF27
DYNLL1
IRF2BP2
CSNK2B
BCAP29
ATXN2
TSC1
GFI1B
RPS12
HOXA3
POLR2C
SAR1A
AP3M1
CNPY2
TRIM41
HSPA1B
PATZ1
MEMO1
RPL7
RDH10
CALM2
ENAH
GAGE2A
DENND4B
SPEN
FSTL3
CDK12
PPFIA4
SRCAP
LOC730183
WDR24
LRP6
ADNP
POM121C
PACS1
H2BU1
H2AW
HNRNPU
SAMD1
TMPPE
GLB1
PROSER1
NHLRC3
PPP1R37
TXNIP
LRRC37A3
GAGE2B
SFT2D3
USP34
GTF2IRD2B
GTF2IRD2
ROGDI
TLL2
NUDT4B
NUDT4
CENPVL3
MARCHF6
RECQL4
LRRC14
PPP3CB
CSRNP2
ZBTB37
TUBGCP6
MLXIP
GPX1
HYAL2
EIF4A1
ANKLE2
TRIM52
GINS2
OTUD7B
PAF1
MED29
CDK9
DCDC2
PHIP
TARBP2
MAP3K12
ZNRD2
TBC1D13
PNRC1
ATXN7L2
LBR
DPY19L4
SF3B3
COG4
TARS3
EIF2D
PDE4DIP
RPL6
UFM1
TRIM45
NAXE
MTMR10
STMP1
MORC3
IFRD2
PURA
FBXO4
ZNF341
PPARA
ACTN4
ZNF398
RPL35
CMTR1
RBM39
DNAJC21
XPNPEP3
ST13
DNAJB7
NPRL3
MRPL12
SETD5
ETDB
NUDT16L1
APTX
RICTOR
KLF9
C8orf37
CCDC130
POLDIP3
CUL9
SOD2
LONP1
CATSPERD
ISL2
ZBTB2
GADD45A
HAGHL
COMT
C7orf25
TP53BP2
MADD
CTNNB1
EGLN1
DGKZ
HYI
METTL8
DCAF17
C17orf75
TRIM3
ZNF718
ZNF595
SRA1
SFXN4
KLF12
CLK3
HNRNPF
ZCWPW1
MEPCE
OVCA2
PAXBP1
MIF4GD
DERA
RASA4B
YAP1
RUVBL1
ID2
THEM4
MORF4L1
TLE3
JPT2
ADARB1
TFAP4
BMI1
SETD6