ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448667 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◣ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
CCDC200
C6orf226
SYCE2
DHPS
PHF23
DVL2
ATAT1
ZC3H10
RPL41
KRBA2
C19orf53
PHF1
EPN2
H4C3
H1-6
H2BC4
H2AC6
EDC4
RPL17-C18orf32
RPL17
C18orf32
DNAJC9
NRAS
JMJD7-PLA2G4B
JMJD7
DDAH2
H4C12
UBE2M
CHMP2A
SYNRG
TMEM107
VPS28
ZFP36L1
H2BC11
H2AC11
H4C9
H4C11
B3GALT4
RPS18
VPS52
SCRIB
SUMF2
RPL22L1
NADSYN1
DHCR7
SLC35E3
H4-16
H2AJ
GPN2
CUL7
FAM131A
NDUFAF3
DALRD3
COX20
MAZ
PDE4A
MRPL53
NAT10
ARFGAP2
CXorf38
GADD45B
IFITM1
IFITM3
CHD2
ADM
H4C7
H3C7
H2BC9
ID3
C12orf57
IER5L
FAM228B
SF3B6
RHOB
MPDU1
LOC100996842
CD68
SNAPC5
FIBP
CCDC85B
JUNB
VTI1B
VEZF1
SCAMP3
AMDHD2
SLC38A2
IKBKG
G6PD
GGA2
TUSC2
HYAL2
SSC5D
NAT14
H4C2
H4C1
H3C2
RIT1
ABTB1
IFITM2
PRKRIP1
SLC39A7
RXRB
HSD17B8
RING1
HES7
ALOXE3
INPP5E
ZNF653
STAG1
FRG2C
GTF2A2
H2BC12
H2AC12
POLG2
PFDN5
MYG1
H2BC5
H1-4
CAPNS1
MSH4
H1-2
PRKAG1
CCDC107
E2F3
STX10
IER2
ISL2
H2AZ1
DNAJB14
AKAP8
SAR1A
RPS2
NDUFB10
RNF151
ZNF34
RPL8
MT2A
TNFRSF12A
THOC6
HCFC1R1
MT1M
MT1E
MID1IP1
RAD23A
APOM
GPANK1
C6orf47
CSNK2B
TUBB
H2BC21
H2AC21
H2AC20
CDK11B
CDK11A
KIF2C
CITED4
NOP53
MRPL40
HIRA
HPDL
DYNLL1
MTA2
TRIM41
TMSB4X
SIRT7
ARHGAP4
IGF2BP3
ZNF446
H2BC8
H2AC8
SECISBP2
ZNF581
ZNF580
ARHGDIA
TRIM8
RRP36
MEA1
EPN1
PRAF2
SH3BGRL3
PRRT2
PAGR1
CYRIB
FLOT2
H3C13
H2BC18
VARS2
HNRNPA1
CBX5
H2AX
HMBS
CCDC24
MTRNR2L1
DDIT4
FUT11
H3C15
H3C14
H2AC19
H2AC18
RPL13
FTL
SLC3A2
HMCES
ARID5B
POLD1
CDK16
FTH1
RPS28
NDUFA7
TRIM37
MDP1
CHMP4A
WBP1
INO80B
POMZP3
MOV10
SCFD1
FADS2
FADS1
CDH24
ID1
CCDC34
SPOUT1
CDKN1C
IER3
FLOT1
TBK1
PSMG1
RPS23
ATP6AP1L
H2BC15
H2AC15
TUBB4B
FAM166A
CD320
MST1
PATZ1
CSKMT
C11orf98
UQCC3
LBHD1
TMSB10
DUX4
SLC25A39
SPEN
LDHC
ANKH
TRMT112
PRDX5
DONSON
TLCD2
TCTEX1D2
ELK1
UCKL1
RAB40C
RPS15A
KMT5B
SNAP47
GMPPB
AMIGO3
RPS11
RPL13A
H2AC4
PDCD2L
ATF4
VWA7
CIRBP
NXF1
H4C5
TEDC2
IRF2BP2
TLL2
SORBS2
IRF2BP1
ACTRT3
MYNN
ZNF48
FAM89B
EHBP1L1
ZNRD2
GANAB
WDR6
NOLC1
PIM2
STYX
MATR3
CD79A
PHLDA1
GMEB2
PCF11
SNX14
H2BC7
H3C4
H2AC7
ARHGAP39
GINS2
MAD1L1
HMGN2
UBTF
LMNB1
SFN
PFN1
RNF167
SLC25A11
ENO3
KLHL11
PHOX2A
TOM1
GPAA1
EXOSC4
RNASEK
C17orf49
PYGO2
LOC101928120
S100A6
NPM3
FGF8
ZBTB45
GSTO2
H3C12
H2BC17
H2AC17
ZFX
BORCS6
ING1
MUC3A
NDST2
METTL8
DCAF17
RCC1
GATD3B
GATD3A
IGF1R
CAMK2N2
SFT2D3
SRSF11
IQCG
RPL10
LMLN
C5orf24
DUSP2
ASTL
JADE2
HAX1
RPL35
ARPC5L
H3C1
H1-1
EIF1
INPP5K
RGL2
TOB2
LLGL2
C8orf37
HMGA1
LARP1
MAPK8IP3
SNAPC4
WDR90
KRT10
PHF8
UBB
GAS2L1
DNAJB4
H1-10
GAPDH
UBC
ILF3
PNRC1
WBP1L
VEGFB
DNAJC4
TRPT1
NUDT22
POLR3D
COX18
STUB1
JMJD8
RBM4
ICA1L
RHBDL1
DUSP5
PWP2
LOC102724159
MTIF3
SIX5
RPS29
TRIM45
ANAPC4
DPH7
DHRS11
PRKDC
MCM4
BAZ2A
CEBPB
SP3
JUN
TTLL3
GINS3
TRIM25
GTF2A1
PCBP1
TEX45
ARL6IP4
DAPK3
HDAC10
FRG2
MLLT6
NAPRT
MROH6
GET4
MTMR10
ABCF3
TIGD5
EEF1D
SPHK2
FAM83E
RPL18
TYMP
SCO2
RILP
PHLDA2
FSTL3
GRAMD2A
ACVR2B
SMG9
TIMM13
TSC22D1
USP34
XRN1
ZCCHC14
TUBGCP6
FBF1
FDX2
FIGN
MAML1
SELENOH
ABCB6
TLE3
DYRK1B
IDH3B
TIMMDC1
ETV6
H3-3B
IFRD2
BAG2
TBR1
TMEM132A
APOLD1
PPP1R37
CISD3
SRRT
MVB12A
H3C10
H2BC13
H2AC13
CHD5
RAB23
ADK
NKIRAS1
RPL15
PIP5KL1
WDR74
FAM72B
WDR24
MAN1B1
TRADD
HSF4
FBXL8
WDR38
ACTN4
SNX16
ARF3
REEP4
NOL3
SELENOI
ADGRF3
TMEM223
TMEM179B
MAPKBP1
KLF6
LAMP1
PRPF38B
CCNT1
ROPN1L
IMPDH2
ATP5F1E
ZFP36
PLEKHG2
MYL6
PTAR1
RPLP2
NPRL3
PIDD1
TBC1D22A
DRAP1
C11orf68
C19orf71
CXCR5
EFCAB13
CDC6
C16orf46
LRP2BP
ANKRD37
PMM1
WDR97
MAF1
CEBPA
CCDC138
YAP1
QSER1
SLC25A10
H4C8
DPH2
B4GALT2
ATP6V0B
ORAI3
PHF10
MYC
IRX3
TCIM
PNMA1
ANTKMT
CCDC78
APTX
METRN
TMEM230
LRRC24
C8orf82
ANKRD12
SGF29
UBE2C
NANOS1
SLC39A1
CRTC2
MRPL28
TTC33
TUBA1B
SLC25A28
TNS2
SERINC4
HYPK
H3-2
NARF
PXDN
RHOT2
PCBP4
CENPA
CALM2
PRMT3
CEBPD
RANGRF
THOC5
SIGMAR1
ARID3C
CSNK1G1
GPR137
BAD
ARID1B
H4C14
RABGEF1
LONP1
CATSPERD
TAF2
ZNF782
POM121C
ZNF513
ZNF35
SLC50A1
DPM3
COA6
RPL27A
STXBP2
PCP2
CAVIN3
ACACB
H3C8
H2BC10
MARCHF6
RAB1B
SLC30A7
EXTL2
DPP3
CCND1
GCN1
RPLP0
H4C15
LENG9
EXOSC6
SHOX2
RSRC1
SEMA4C
MCCD1
KATNBL1
OAZ1
P2RY11
ZNF451
EIF3G
LRP8
DCAKD
PHF14
NME3
MRPS34
EME2
NME6
SURF6
TFPT
PRPF31
MMP24OS
MMP24-AS1-EDEM2
ZNF276
VPS9D1
RPL19
YWHAH
C1orf56
LRPPRC
GDF15
CRK
CS
MICAL3
TAOK2
CCN1
MTFR2
SNX5
MGME1
PMS1
ORMDL1
TAF4
PCBD2
LEPROTL1
TAF10
SRSF4
CLN8
PANK1
CEP192
N4BP2
GADD45A
FANCC
NCOA5
PTMS
LAG3
COX8A
SRL
FBXO31
MAP1LC3B
ZDHHC5
FNBP1
RCC2
ADAT1
ROMO1
CELF1
RRAGC
SLC35B2
AQP11
ACP4
POLR2H
CLCN2
SPAG9
MPHOSPH8
SRCAP
LOC730183
TTYH2
NUDT17
BASP1
PAIP2
IL10RB
TPCN1
IQCD
FERMT1
GAMT
ZBTB12
EHMT2
C2
HDAC7
PBLD
HNRNPH3
ZNF143
FOSB
FOS
PYROXD1
GRIN3B
TRIM3
ISY1-RAB43
ISY1
SLURP1
MYLPF
SAT1
SEPTIN1
POP5
TRIM52
SIPA1
CHEK1
MAN2C1
ABHD16B
MNT
SMTN
JOSD2
ASPDH
ZIC2
NFKBIA
TFAM
ARF6
VAV2
MLXIP
TUT1
TYW1
SBDS
EIF4A1
C1QBP
FAM117B
PCMTD2
THAP7
TLCD1
NEK8
RPS27A
CLHC1
MLX
COASY
MRM1
CLIC3
RPL23A
CCDC106
URGCP
URGCP-MRPS24
ZNF696
SETD1B
URB1
SEC14L1
OVCA2
SLC12A6
KLC2
UNC13D
NOP10
C17orf98
RRS1
ADHFE1
MRPL12
SLC35A2
SETD5
ATXN2L
EID1
HYKK
CSGALNACT1
GLE1
NDUFS3
KBTBD4
ZBTB22
TAPBP
JUND
IQCN
PDF
RPUSD1
CHTF18
CFD
GABARAPL1
CDKN2A
PNPLA6
HUWE1
XBP1
NME4
DECR2
MAP3K1
PHIP
DPY30
ARID2
CACNB3
TMEM243
USP8
UBL4A
LAGE3
MADD
RABL6
FAM156B
FAM156A
TNFSF13
SENP3
IL34
MYOZ3
USP21
PTPN6
NCOA2
AJM1
C7orf26
NPDC1
ENTPD2
ARID1A
SEC14L2
RPL37
BCAR3
CARD6
CCM2
GABARAP
RPRML
PPP4R3B
CDK13
TBXA2R
CELSR3
BMI1
BCL6
RETREG1
PABPN1
YY1
CCAR2
SMIM29
SPTAN1
ZSCAN16
C8orf58
ENTPD8
PURA
RARS1
BRD3
DNAJC21
MIF4GD
BICD2
TMEM250
CPT1A
FNTA
MRAS
YIF1A
TMEM151A
CTNNAL1
CSRNP2
CCDC97
LRRC73
SLC6A9
STXBP3
KMT2A
RASD1
TSFM
NTN3
SPRY1
TBC1D24
ST3GAL1
RPL6
ACOX3
USP22
INTS1
PTP4A1
FAM168B
KLF3
VGF
TP53BP2
TUBD1
RPS6KB1
SIAH2
SLC5A3
MRPS6
SERF2
ELL3
ATXN2
SLC35E2B
IL17C
ETV4
BRWD1
SELENOO
CCDC130
PRKACB
PDCD4
STK19
DXO
CYB561D1
ABCA7
PRR12
PNKP
IVD
LBR
CACFD1
MRI1
ELOVL1
CDC20
G3BP2
DERA
HYAL1
NAA80
HYAL3
C7orf25
KMT2E
TOPORS
SMIM27
CRELD1
SF1
PSEN1
SLC25A5
PORCN
ULK3
HAGHL
SRSF2
MFSD11
ECI1
ZBTB2
PKM
NAA35
MTRNR2L2
MSH3
DHFR
SLU7
PTTG1
MRPL24
ADAMTS10
HSPB1
RNF115
POLR3C
ZBTB10
LRFN4
DAXX
TOE1
MUTYH
TMF1
ARID3A
KISS1R
LPCAT3
TCIRG1
SWSAP1
DHX58
TXN2
KLF9
E2F5
GAS1
SAMD1
TULP3
C19orf67
FOXO3
ZDHHC12
MYO1G
NOP2
ATP5IF1
DUSP1
ZNF703
SSH2
EFCAB5
SPATA2L
GPS2
HOXA3
PLPP5
HOXA5
HOXA6
DMPK
COQ3
SPRYD3
HTR6
POLR2G
WDR27
C6orf120
POLB
MPC1
DDX3X
IAH1
SGK1
NSD2
PLEKHN1
LTO1
SRA1
RUNX1
NEIL1
PAK2
C8G
FBXW5
TMEM158
ZNF25
COMTD1
PACS1
SLC25A6
PXDC1
PGGT1B
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
H2BC14
H2AC14
COQ7
AGBL2
SCD
KLHDC9
CLASRP
USF2
NFE2L2
CXCR4
CHAC2
POLR2C
RNF225
PHF19
MYL12A
AGAP11
ADIRF
KAZALD1
NOP56
RUNX2
CTHRC1
GTF3C4
DDX31
RABGAP1
CARS1
PITX3
GBF1
PSRC1
HSPA1L