ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10921876 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◣ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

FAM227B
DTWD1
PSMD6
SPPL2A
BCAS3
AP4E1
TRIM37
NPAS4
ARFGEF2
TMOD3
FAM214A
HEATR6
POLR2J3
USP32
LYSMD2
TEX14
RAD51C
BRIP1
UNG
FAM72C
FAM72D
FBXO32
USP8
MYO5C
C8orf33
ARPP19
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRIP13
BRD9
CRBN
FAM72A
PFDN4
TRPM7
ZNF217
PARD6B
HTR5A
PPM1D
GABPB1
XKR7
APPBP2
SLC12A9
MAPK6
FANCD2
CPLX2
CEP55
SLC27A2
MYO5A
SGO1
KIFC1
IMP4
CCDC115
NEIL3
TSR3
GNPTG
PDE4DIP
NTAQ1
IQSEC3
VPS50
HEPACAM2
TUBD1
RPS6KB1
DCLRE1B
AP4B1
PIGX
CEP19
SENP5
SUMF1
IQGAP3
SKA3
MRPL57
WIPI1
BCAS4
OAZ3
TONSL
KLHDC4
RRP15
CCNA2
TMOD2
ZNF212
DYNLRB2
DMXL2
ATXN7
LEO1
SKA1
BUB1
CPEB4
STX16
C12orf66
NAGPA
HIPK1
ARHGEF5
WASHC5
NSMCE2
KIF14
UTP20
METTL1
EEF1AKMT3
FBXW9
SLC25A40
DBF4
DEPDC1B
WDR53
FBXO45
HAGH
FAHD1
MCM7
AP4M1
TMEM199
POLDIP2
RBM48
PEX1
TACO1
TMEM41A
RFC3
PLK1
UBE3B
KCTD10
SNAP25
ATAD2
EIF2D
NOTCH2
KIF18B
SPDYE14
SPDYE10P
CASTOR2
MCM10
AURKB
TMEM183A
NUB1
GTF2H3
EIF2B1
WDR62
THAP8
RNF166
CTU2
BARHL1
FAM72B
XRCC2
TRIAP1
TECPR1
UBE2C
CCND3
HES1
DSCC1
CPSF1
HSF1
BOP1
NCOA3
WDR74
RABL2A
THOC3
TICRR
ZNF282
POLQ
PLCG1
RAD18
PGBD5
MYL12B
SPNS1
PKMYT1
ADAT1
MIS18A
GTSE1
PARPBP
NUP37
METTL2A
METTL25
CCDC59
WDR72
VARS1
PPIL1
NCAPH
TRMT61A
POLR3H
RPLP1
RNASEH2A
MSH3
DHFR
GNB5
BCAS1
MYBL2
ZNF3
PREX1
TMEM203
NDOR1
KPNA2
COMMD4
QSOX2
NUDT4B
NUDT4
PCLO
P2RY2
ZNF778
WDR81
TRIM33
TDRD7
ZFPL1
CDCA5
RANGAP1
RRP1B
HSF2BP
ZNF688
NRAS
GPR89A
SAP30BP
RECQL5
DPY19L4
URB1
NHP2
AARS2
PRCP
DDIAS
AGFG2
RAD54B
SMYD5
SHCBP1
PCOTH
MIPEP
PC
PAK2
BMP7
VPS11
C8orf76
SVOP
TBX2
SMG8
POLR2J
NUF2
BLM
PPAN-P2RY11
PPAN
NUP107
SRI
BIRC5
TBRG4
NEURL2
CTSA
LAMP1
KRR1
DZIP3
CIP2A
SPC25
RECQL4
LRRC14
NOL8
CENPP
SIKE1
LRWD1
ALKBH4
CENPM
ESCO2
FAM83D
GCSH
GTPBP10
VIRMA
CENPH
GPR89B
RINT1
ATP13A3
ZAR1L
BRCA2
ZSCAN25
FANCI
ABCF1
NOC4L
DDX51
SPATA33
NOM1
CENPA
NDUFAB1
ADIPOR1
ACSF3
IPO11
FBXL13
ARMC10
EEF1E1
CDT1
HCFC2
GLT8D2
DSTYK
SF3B4
TRMT1
TPH2
TOMM22
SNAPC5
SEC13
ZEB1
CENPBD1
TPX2
FRAT2
TFRC
PCCB
LIX1L
RBSN
CLCN7
KDM5B
WDR4
DIAPH3
MON1A
RBM8A
CFAP69
SENP2
CKAP2L
UNC50
COA5
N4BP3
DHX40
NCBP2AS2
NCBP2
EMC3
SLC7A5
CBLL1
PSMD4
CWF19L1
RAD51
PUS7
PLEKHM3
TPRA1
BCAS2
MRPL3
TCF19
CCHCR1
POLR2K
MBTPS1
LSMEM1
MRPL27
EME1
LOC101928764
BNIP1
TBC1D31
TSPAN10
NPLOC4
SLX1B
SLX1A
BOLA2B
BOLA2
NET1
POC5
SNRPD1
TIPARP
DNAJC30
BUD23
RNF40
CCDC189
INPP5K
MPHOSPH6
ECT2
SH3BP5
RBM28
IFRD1
EXOSC5
BCKDHA
NBPF15
MRPL21
IGHMBP2
DLGAP5
MRPS21
SYT5
TMEM168
DUS2
DDX28
ZFYVE21
XRCC3
H3C15
H3C14
ATXN1L
TSPAN19
LRRIQ1
ASF1B
TMEM150A
ZHX1-C8orf76
ZHX1
ERAL1
TERF2IP
KARS1
SYPL1
LAD1
WASHC2C
GCDH
XRN2
COPS7B
HROB
MSTO1
GINS2
METAP1D
VPS33A
UTP15
ANKRA2
HSDL1
DNAAF1
CFDP1
TCTEX1D2
PNPLA8
TRAIP
FAM222A
RCE1
TRIP4
LRRC37A3
C7orf50
RRP12
GEMIN4
MTMR12
KIAA0895
ANLN
CCDC150
RUBCN
FYTTD1
CHD1L
PRKAB2
GET3
GSTP1
C17orf97
VGLL4
CRNKL1
CFAP61
INKA2
DDX20
METTL18
C1orf112
NBN
MRPS35
VRK1
TMED5
CCDC18
NDUFV1
DEPTOR
RNF115
POLR3C
MDM4
SSR3
KLF10
RAD54L
PIGU
TIMM23
MKS1
YIPF4
PBK
PABPC1
MRPS14
TRMT61B
BCAR1
EIF3C
EIF3CL
NAGK
ASNS
WDHD1
SOCS4
GRWD1
NDUFAF6
CCNE2
GPAM
DTX2
UNKL
CCNB2
MND1
SSNA1
ANAPC2
RAB37
TWF1
APPL2
ZNF706
DYNC2I1
SLC25A26
CDK1
EMC8
COX4I1
POLR3F
DZANK1
DCXR
TMEM120B
NBPF11
FA2H
MAD2L1
KAT2B
PARL
LONP1
CATSPERD
EIF3E
BRMS1
ZMAT3
CEBPZ
MCM3
SMPD4
MZT2B
DDX11
TASOR2
CRY2
SPDL1
RNF13
ZNF316
VHL
ADAM22
TAMM41
LMTK2
FRAT1
VWA8
PRPF40B
PSME3
GOSR2
PSMG2
CEP76
MIS12
DERL2
PRMT6
HEXA
STIL
MAPK8IP2
PHTF1
ISY1-RAB43
ISY1
CLPTM1L
GLI4
PHAX
WDR83
WDR83OS
PDE4C
TRUB2
COQ4
MRPL4
PGAM5
ZMYND8
SLC52A2
FBXL6
GTF2H4
TMEM44
UFSP1
KAT8
E2F1
RPL39L
BOLA2-SMG1P6
ATG14
ECSIT
RAD9A
RIOK3
MRPS36
LRRC58
LNPK
PWP1
MRM3
GLOD4
POLR1F
TMEM258
FEN1
MZT2A
THOC7
NUFIP1
GPALPP1
ATR
SNRPE
MIS18BP1
PELP1
CKMT1B
DUSP23
CAPN7
PAM16
KDELR2
TADA2B
CCDC96
IQCG
CNPY3
LMLN
DUS4L-BCAP29
DUS4L
COG5
COQ2
GLRX2
RAB22A
TRIB1
GDAP1
RABIF
NAXE
ZSCAN2
STOML1
FAM185A
ZNF276
VPS9D1
SGO2
NDUFS7
RPSA
ZNF771
ATAD5
HEATR5B
GPATCH11
ZHX3
SART1
ASCC2
ARMC8
ERN1
OVOL2
MARCHF8
NKIRAS1
OPA1
NR1D2
INTS8
SYTL2
GTPBP4
C12orf45
SLC35A4
APBB3
ATG7
GINS1
ZNF718
U2SURP
ATP5MF-PTCD1
ATP5MF
ZNF595
BOLA3
NMD3
APH1A
DNAJC9
RNASEH2C
EIF3H
ZER1
NARF
ACAP2
CYB561
ARRDC2
MAFA
RTF2
CLNS1A
ELAC2
DLD
EZH2
NOMO3
DGAT1
TIFA
RRM2
RABL2B
DDX46
EIF3F
BOLA1
FBXO5
H4C14
TAF5
ZFAND2A
SQLE
UMPS
RMI2
B4GALT7
EXOSC6
TATDN2
POLA1
SHC1
CKS1B
BRIX1
RHBDD2
METTL2B
NAA25
XPC
LSM3
PMPCA
ENTR1
TP53RK
POLR1H
STAT1
MRPL11
TDRKH
NOL12
NAMPT
ANKRD54
SLC29A1
RUVBL1
SH3BGR
LCA5L
NOP16
HIGD2A
TSFM
TFPT
PRPF31
GDI2
RTKN2
PSMG3
POLE2
RBM19
NEK2
NUDT15
C5orf51
KLHL20
TARS2
XPO4
MCM5
EPG5
FAM91A1
NOL11
VPS29
RAD9B
NR3C1
NLE1
ATP6V1C1
PHF5A
ACO2
ZDHHC6
VTI1A
ESYT2
GSTO2
KLHL12
SF3A1
CCDC157
PDIA4
COMMD2
MRPS25
UBXN7
NBPF12
FDX2
HASPIN
PIMREG
TOM1
LMAN2
C2CD5
TEDC2
MRPS34
EME2
PHLPP2
RRM2B
MRPL2
KLC4
DLST
SSBP1
WDR36
VPS35
FANCM
DDX41
PRPF18
DNAJC2
PMPCB
ANKRD46
CYB561D1
TBL3
PFAS
CD55
NUP160
TATDN1
NDUFB9
CRY1
GCN1
WIPI2
FBXL18
CHRNA5
RNF168
DEK
TRAM2
RFNG
GPS1
ZFP36L2
INPP4A
LRATD2
DPH1
SUGP2
ARMC6
ESPL1
HNRNPH1
ZNF398
ZNHIT1
PLOD3
EXOSC9
AP3B2
ELP5
CTDNEP1
MTBP
MRPL13
LRCH4
FBXO24
C16orf46
RNFT1
NXT1
ROMO1
DMTF1
VGF
PPP1R15B
RMND5B
CCNB1
KIF20A
BRD8
EDC3
RAD51AP1
C12orf4
CDK5RAP1
PEPD
PPP1R16A
CELF1
NELFB
RELB
PTPMT1
TROAP
KIF23
DYRK1B
STX6
ZNF451
CCDC97
SLC25A24
SGTB
NLN
ERO1A
CDYL
PLSCR4
GATB
TSEN2
PDXDC1
REXO5
ERI2
TMEM242
SFSWAP
TOP1MT
TBK1
FAM24B
EIF4ENIF1
BMT2
CKS2
WDR43
USP30
CLCC1
RPTOR
MYL12A
CEP135
KNOP1
ASPM
ADPRS
NDUFS3
KBTBD4
PRPF19
RIPK2
GTF3C3
CYREN
NAPEPLD
SLC25A25
NAIF1
WASHC2A
UFD1
CDC45
UBFD1
EARS2
PPIB
SNRPC
CKMT1A
UBE2N
IWS1
AMDHD2
E2F7
ADPGK
EIF1AD
BANF1
USP20
C9orf78
CDIPT
VPS41
CHFR
POLR2D
DNAJB6
C10orf95
EXO1
AEN
PRKAR1B
ZNF23
EEFSEC
SCLT1
C4orf33
STARD7
RNF19A
KMT2A
CCZ1
COPS6
CIART
FOSL1
PRELID3A
TPD52
ZNF395
KCTD9
CDCA2
DHODH
RIOK1
CAGE1
ATG101
TBC1D15
PPP1R12B
FAHD2A
TP53INP1
TTF2
RXYLT1
NDC80
METTL4
WDR25
WARS1
RGL1
SLC45A3
PIK3C2B
TMEM186
PMM2
ZFP1
THUMPD3
ZC3HC1
ARL8B
MKRN2
DCK
CEP78
ARRB1
DDX49
COPE
EXOC2
RSRC1
NDUFV3
RALBP1
TBC1D23
SERF1B
SERF1A
NIT2
SERPINB6
NME1
MPHOSPH10
MCEE
TMEM231
EBAG9
TCOF1
ABCF2-H2BE1
ABCF2
HAUS7
ABCC10
MRPL42
DNM1L
ELAPOR2
CDC25A
PMS2
AIMP2
DIMT1
SLC39A6
ELP2
SERP1
EIF2A
RABGEF1
VPS45
SLC39A13
PRR14L
FAM168B
MYO1B
URB2
TAF5L
NUP35
STX18
HSPA5
SNRNP200
RMDN1
PYCR3
PSMC5
FTSJ3
RAD50
DDX23
DPH7
CDKN3
CPNE3
PDHA1
CDC6
WDR61
YWHAG
SEC24A
CDC73
ANKRD36
SELENOT
SMG5
ARHGAP19
PRKRIP1
MAP11
RAB24
PRELID1
SUN2
IGSF3
RRP1
NDUFAF5
ESF1
SMN2
SMN1
YPEL2
PUF60
TCHP
POLD2
MDM1
NT5DC3
SPG7
BSN
MRPL23
TLCD5
DDR1
CPNE4
VAC14
OXNAD1
DPH3
IDH3B
SPC24
CFAP54
G2E3
PET117
KAT14
DDX59
RRP7A
JRK
NOL6
INTS7
DTL
STYXL1
MDH2