ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089504 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◣ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
BRIP1
NPAS4
TRIM37
ARFGEF2
PARD6B
APPBP2
TUBD1
RPS6KB1
DYNLRB2
UNG
PFDN4
NCOA3
FBXO32
SMG8
IQGAP3
SLC12A9
USP32
HTR5A
NAGPA
SCRT1
BCAS4
ZNF217
FBXO5
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
ZNF331
IPO4
TRIP13
BRD9
LOC101928764
ZFYVE1
PPM1D
MTFR2
TEX14
RAD51C
C3orf14
DCLRE1B
AP4B1
KLHDC4
CCT2
ATG14
MCM7
AP4M1
NOTCH2
TROAP
HSF1
BOP1
C12orf66
FANCI
CRBN
XKR7
BIRC5
SKA3
MRPL57
RAD54B
FAM72B
SFSWAP
CREBRF
DZIP3
CIP2A
FAM72C
FAM72D
PPP1R16A
KPNA2
TSR3
GNPTG
TRMT61A
OAZ3
ZFPL1
CDCA5
TTF2
FAM72A
SGO1
TTK
MOK
CCDC200
HCFC2
GLT8D2
BARHL1
RBM48
PEX1
POLR2J3
UTP20
FANCD2
TACO1
NTAQ1
LTV1
EIF2D
TRIM33
GTF2H3
EIF2B1
IQSEC3
DHX40
UBE2C
SIKE1
TMOD3
VPS50
HEPACAM2
FAM214A
CCDC86
MAPK8IP2
TICRR
POLQ
ATXN7
THOC7
MIS18A
RFC3
XRCC2
DLGAP5
C8orf33
MCM10
NCAPH
HIPK1
URB1
WASHC5
NSMCE2
RRM2
DHX37
PTRHD1
CENPO
LRRC29
PGBD5
TTLL11
NUDT1
MRM2
RNF166
CTU2
TSEN2
BLM
TBX2
RAD18
METTL3
RSPH1
MOCS3
DPM1
SUMF1
KIF14
RACGAP1
ZC3H18
TMEM150A
NAA25
ENTPD5
BBOF1
METTL2B
TONSL
CPLX2
FAM227B
DTWD1
ATP6V1C1
PHTF1
RAE1
METTL1
EEF1AKMT3
RNF40
CCDC189
DNAH7
SAP30BP
RECQL5
RMDN1
CPNE3
RRP12
CCT5
ATPSCKMT
SMYD5
BUB1
CEP128
ANGEL1
MYL12B
C16orf46
RBM19
VRK1
NGDN
ZEB1
ZAR1L
BRCA2
MED20
BYSL
YPEL2
RAB22A
MND1
RTKN2
NEIL3
GFPT1
RBM28
PIP4P2
PPAN-P2RY11
PPAN
KLHL36
EXO1
TMEM186
PMM2
POLR2J
SLC45A3
TRMT61B
RABIF
LYSMD2
TMOD2
PDXDC1
BMP7
SRPRB
TTLL5
ERG28
NME1
TRPM7
VARS1
NHP2
METTL2A
MTMR14
TBC1D13
NBPF15
EIF3C
EIF3CL
SPPL2A
MED13
PDE4DIP
RNFT1
CYB561D1
AEN
TCTN2
LIX1L
CCNB1
RECQL4
LRRC14
POC5
CENPA
CDT1
MRPS23
TOP1MT
TBRG4
AXDND1
CYC1
BICDL1
VGLL4
BZW2
ANKMY2
PTPN1
ZNF696
NGRN
SRD5A1
NSUN2
GNPNAT1
CDK1
TMEM251
MOAP1
NEURL2
CTSA
ATAD2
MLYCD
CAPZA2
CHID1
AZIN1
C16orf71
ANKS3
GTPBP10
MRPL11
METTL6
EAF1
CUL2
L1CAM
CNPY3
CCNA2
TASOR2
SLC35B1
OSTM1
SURF2
SURF1
INKA2
DDX20
NET1
IFT88
NEK2
SARS1
SLC25A13
NOMO3
PPM1E
KIF18B
LRPPRC
WDR35
STX7
MCRS1
CAMSAP2
WDR43
SAXO2
EFL1
CDK4
EAPP
RRP15
BUB1B
NOP16
HIGD2A
CCDC146
PLK1
SLC25A24
GINS2
SMC2
C6orf89
LMTK2
VPS13B
NOM1
COPS3
NAA20
MKI67
UTP23
ACOX3
ZNF778
RFC2
GABPB1
DLST
SPG7
SLX1B
SLX1A
BOLA2B
BOLA2
MON2
ABTB1
CKAP2L
TTC27
NDUFAF6
CCNE2
NDUFV1
MBTPS1
TBK1
XPO4
ATP1A1
TADA2B
CCDC96
RIPK2
ATL2
TSR2
SNX16
NOL6
MTX1
THBS3
NOL8
CENPP
UFD1
CDC45
KIFC1
EEF1E1
PES1
AOPEP
FBXO33
IDH3A
VANGL1
DYRK1B
SKA2
PRR11
ATG101
FBXO43
ZNF212
NDUFAB1
AURKB
POLR1B
NOL10
DDX42
CCDC47
HSDL1
DNAAF1
TMEM183A
KCNH6
AGFG2
ZNF367
FRAT1
NBPF1
KNOP1
INTS2
ZNF79
MYL12A
PIGH
ZFP41
MET
DDX49
COPE
LSG1
CFAP69
RRP1B
HSF2BP
MTPN
LUZP6
TEX2
GPSM2
RNASEH1
ZNF688
NEMP1
CFDP1
FANCM
INTS1
WDR4
ESCO2
E2F4
TSFM
SPTLC1
UMPS
RPS23
ATP6AP1L
TPTE
TRMT1
RPP40
MFSD1
NRAS
TBC1D30
KPNA1
RBM8A
LSM8
CPLX1
RAD51
RUVBL1
TRMT44
RNF114
CALM1
MFSD5
SIK1B
SIK1
TMEM18
HAUS5
SPNS1
SND1
DUS4L-BCAP29
DUS4L
COG5
PSMD12
KLF10
PIAS3
CPSF1
GTSE1
THAP5
DNAJB9
SH3BGR
LCA5L
AP4E1
GPR89B
SEC13
SLC52A2
FBXL6
TECPR1
C11orf24
C14orf28
SPAG9
HELLS
PDIA4
CKAP5
CENPW
EIF3B
WASHC2A
FDX2
EBAG9
RXYLT1
ZC3H3
GDPGP1
CIB1
SCRIB
GPATCH4
DUS2
DDX28
ZBTB9
GLRX5
TMEM231
DYNC1I2
YIPF4
TEDC2
SPEF2
SGO2
RPS29
FRAT2
FAM207A
LRR1
CSRNP2
HAGH
FAHD1
NAGK
GSN
SEL1L
TAMM41
NUP160
AP3B2
CSDE1
MDM1
CMBL
CSTF1
AURKA
SPATA33
GPR89A
RHBDD2
SLC25A19
LMAN2
SF3B4
CENPBD1
GET3
VPS4A
TRAPPC10
RAD9A
SLC25A36
CASKIN2
TSEN54
DNAJA3
PPP1R12B
TOX4
RAB2B
SUV39H1
RFC1
SUPT4H1
MYO5C
FBXW9
TMEM203
NDOR1
DOLPP1
COQ2
POLG2
OXR1
GCDH
POLR2J2
H1-10
STK3
KIF6
MTRNR2L8
C12orf45
APH1A
TDRKH
GCSH
C7orf50
CCNG2
FBXL13
ARMC10
PRKAR1B
HEATR5A
POLR2K
TRIM4
ZC3HC1
L2HGDH
DMAC2L
METAP1D
COG7
LTN1
DDX46
DSTYK
USP14
SF3B2
DDX11
WDR81
ADCK1
NME2
PIF1
LEO1
SLC27A2
SH3BP5
CENPN
RHNO1
FOXM1
SPC25
THUMPD3
BDH1
CEP135
ATP5F1E
RBM42
STOML1
INCENP
CIT
RNF19A
PSMD5
COX6C
FBXW8
MED23
MAX
TMEM39A
NANS
EMC8
COX4I1
MAF1
DLD
GPR135
PTGFRN
NUP107
GOLGA3
PHF5A
ACO2
POLE3
C9orf43
NUDT4B
NUDT4
GUSB
PIP4K2C
ABCA5
LINS1
ASB7
NR6A1
P2RY2
KCND3
KAT2B
MCCC1
EEF1D
TIGD5
ERAL1
SNRPC
TEDC1
MDM2
MED6
CNKSR3
GRINA
ATR
ARMC2
PSMG4
ATG7
ATXN1L
TEX10
NEK11
ASTE1
VKORC1L1
LCMT1
MAD1L1
CYB561
TRIP4
PLK4
MEA1
CDC14B
LRFN4
CYP51A1
DUSP12
GNA13
TAF1C
FAM13B
SLC35A1
TRAPPC9
CAPN7
UBE3C
ZNRD2
KRR1
DENND2C
GREB1
MRPS35
ZSWIM9
LIG1
DPY19L4
CLPTM1
POM121
OTULIN
GABARAPL2
TOR1B
ATP5MG
SRRT
UBR5
ATP9A
HSP90AB1
ADPGK
ZNF408
ARHGAP1
NUFIP1
GPALPP1
PDSS1
BAZ1B
TMEM129
TACC3
MAP3K3
HPCA
PRMT6
KIF20A
BRD8
STYXL1
MDH2
DBF4B
EXOC2
TAF3
CLCC1
GFOD2
FPGS
AP1G1
LIN54
ANKRD28
SPRYD7
CLPTM1L
SOS1
RHPN1
RABL2B
C5orf51
ANAPC7
NIFK
LSS
CBLL1
HERC4
RPL32
XPR1
SENP5
CLBA1
PDP1
USP6NL
TFIP11
DOP1A
MXD1
C12orf65
PSMB7
SLC35A2
KIAA0319
VPS33A
ASPM
PNPT1
MRPL3
RAB14
BMS1
LTO1
RFWD3
C17orf97
SNRNP25
POLR3K
TRIM39
EML4
TBL2
E2F7
BCAS1
DYNC2I1
TRIAP1
TOMM40
PWP2
LOC102724159
WDR3
GDAP2
STX6
QSOX2
PEX3
ADAT2
FANK1
CDK5RAP3
MYBL1
SPATA2
NUB1
SPAG1
SLC25A44
ZNF275
UBXN11
SUPV3L1
REXO4
EEF2K
FAHD2A
GALK1
GLRX3
PLCL1
SMAGP
ALDH1A3
VTA1
NMBR
EEFSEC
CGGBP1
TNFAIP1
IFT20
DENND4B
ZNF654
ALDH5A1
PNN
RHEB
GCH1
PDIA6
PPM1H
CACNG4
RABL2A
IPO11
SKIV2L
NELFE
PPIL1
WDR61
TMEM67
NOL11
RNASEH2A
POGLUT1
PRPF3
RIDA
POP1
FANCA
PKMYT1
RUBCN
ALDOA
GCN1
USP10
STRN3
AP4S1
NFATC2IP
PCMTD2
QTRT1
VAC14
THOC3
PNPLA8
CHCHD6
ZMAT3
TOMM70
LNP1
TMEM120B
FANCC
ARL8B
WDR73
TADA3
ARPC4-TTLL3
ARPC4
STRADA
CLCN7
TP53INP1
WIPI2
TMEM260
GSTO2
TAF5
PRKAR1A
DDX56
HSP90AA1
ECT2
WDR20
TMEM43
CHCHD4
ZSCAN9
NELFCD
HECTD4
SHCBP1
RPIA
SLC7A6OS
PRMT7
DOHH
PUS7
NDUFV3
MCM3
FUBP3
TKFC
DDB1
CDKN3
LYRM4
FARS2
ZHX1-C8orf76
ZHX1
RHEBL1
BLOC1S2
GOLGA1
TBC1D23
DHTKD1
BOLA2-SMG1P6
ERLEC1
ASB3
MXD3
LRRC6
CNOT10
AKAP9
TTC21A
GORASP1
LLGL2
KCNK12
CDK7
PSME3
EDC3
CHUK
MRPS21
UBL7
TATDN1
NDUFB9
TMEM258
FEN1
SUB1
PPM1G
C11orf80
PRRC1
H3-3B
MAN1A2
GRB2
ATP6V1H
EIF1AD
BANF1
ZFAND2A
SAAL1
URM1
COA8
BAG5
RCE1
LRCH1
ERGIC1
WIPI1
TASP1
POLD3
SERINC3
RMDN3
PIP4P1
USP54
PAPOLA
KCTD13
PRELID3B
ERCC3
PCLO
MAD2L1
DDX19A
XRN2
MVK
TAF4B
NDUFS3
KBTBD4
RRM2B
OS9
TM2D3
SMARCC1
ARSG
VTI1B
SEC22A
WWP2
SLC16A6
SF3B3
COG4
ATXN3
RELB
ACTR3B
MAP11
CLTC
NOB1
PEPD
CENPE
CS
ZZEF1
CYB5D2
AP1M1
TMED10
NCKAP5L
CANX
ZNHIT1
PLOD3
TP53RK
UBXN1
ACTR2
ARPP19
NBPF11
TMEM184C
WDSUB1
PAPOLG
CDC20
PNO1
SETD4
GNS
METTL9
NCAPH2
LMF2
TARS3
ELAC2
UNC50
COA5
ABCB8
MTERF1
BRK1
RPL30
PSEN1
R3HDM2
HES3
NUF2
DNA2
RPL6
PTPN11
FLAD1
XPC
LSM3
PMPCB
CCND3
SYNCRIP
C8orf76
POLR2D
ADAMTSL4
PEX5L
WDR74
ATP6V0D1
GTF3C4
DDX31
DYNLL1
CDC37
TIMELESS
DSCC1
PPP2R5C
COG3
GOLGA5
LSM14B
SQLE
TCP11L1
RABL3
GTF2E1
MRPL58
UGCG
SUSD6
MDN1
MKS1
ADAR
TMEM127
CIAO1
TMED2
NAMPT
GPATCH2L
AMIGO1
NBEAL1
HELZ
SNX6
SKA1
NUDT15
PCOTH
MIPEP
ANAPC10
ABCE1
COMMD4
LARP4
SDAD1
SEC61B
PYCR3
CHD1