ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089499 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◣ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

HEATR6
NPAS4
PSMD6
BCAS3
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
PFDN4
IQGAP3
HTR5A
TRIM37
SKA3
MRPL57
PARD6B
USP32
APPBP2
ATXN7
SLC12A9
SCRT1
PPM1D
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DYNLRB2
ARFGEF2
UNG
IQSEC3
ZNF217
FANCI
NCOA3
KPNA2
DCLRE1B
AP4B1
BCAS4
FAM72C
FAM72A
CPLX2
BARHL1
SAP30BP
RECQL5
TRIP13
BRD9
C8orf33
HSDL1
DNAAF1
METTL1
EEF1AKMT3
VRK1
FAM72D
RAD54B
TTLL11
MYBL2
HIPK1
SMG8
TRIM33
MCM10
C12orf66
KIF14
TSR3
GNPTG
C3orf14
NEURL2
CTSA
XRCC2
DHX40
POLQ
NOL8
CENPP
BMP7
TRMT61A
AP3B2
NUDT1
MRM2
FANCD2
HSF1
BOP1
CSTF1
AURKA
XKR7
SIKE1
RNF166
CTU2
RFC3
BUB1
MTFR2
DUS2
DDX28
DZIP3
CIP2A
RRP15
PGBD5
SGO1
MOK
NAGPA
WDR4
RRM2
FAM72B
NCAPH
PHTF1
LIX1L
TROAP
RNFT1
L1CAM
KLF10
EIF3C
EIF3CL
TONSL
KPNA1
KAT2B
MOCS3
DPM1
NOTCH2
KCNH6
WASHC5
NSMCE2
FAM214A
CCNA2
CCDC200
CRBN
EXO1
SARS1
EXOC6
CDIPT
GTF2H3
EIF2B1
ZFYVE1
TBX2
MED20
BYSL
LOC101928764
DSCC1
ZHX3
TMED10
CCT2
THOC7
POLR2J3
TRPM7
FBXO5
EDC3
PDE4DIP
TSEN2
SKA2
PRR11
FANK1
ATP6V1C1
PPP1R16A
RAB22A
METTL2A
CHUK
VARS1
EIF2D
DNAJA3
AP4E1
ZNF517
INKA2
DDX20
TTK
TBC1D30
GNS
TOP1MT
YPEL2
TCTN1
DYNC2I1
MRPS23
CCT5
ATPSCKMT
RTKN2
SNX16
ADAT1
HSPA5
SLC52A2
FBXL6
BIRC5
NEIL3
TTF2
SUMF1
FBXO32
ATG101
CEP128
RMDN1
CPNE3
SGO2
UBE2C
SFSWAP
SQLE
USP14
AZIN1
ZSCAN2
NUDT4B
NUDT4
ZNF696
COQ2
SRPRB
ESPL1
EEF1E1
RRP12
RABL2B
IARS1
RCN2
NDUFS3
KBTBD4
CNTRL
C5
ATAD2
GABARAPL2
U2SURP
SPAG1
WASHC2C
TCF19
CCHCR1
GABPB1
MCM7
AP4M1
RAE1
CREBRF
CLTC
MYL12B
PPT1
MTMR14
ERN1
ARMC2
TSFM
APH1A
STK36
RNF25
CKAP2L
DYRK1B
UTP23
DOP1A
OAZ3
PYCR3
NEK11
ASTE1
ACOX3
CENPN
TRMT44
NDUFAF6
CCNE2
ASNS
POLR2J
NAA25
GTF3C5
TPTE
UTP20
NBPF1
QSOX2
CYB561D1
NUB1
ATXN1L
SNAP25
VANGL1
STX16
PPP1R12B
CCNB1
WASHC2A
CDC14B
TTC27
TICRR
MAPK8IP2
RXYLT1
MRPL44
VAC14
WDR43
WDR31
PRELID3B
ZFPL1
CDCA5
TRIP4
PLK4
SPTLC1
PRKAR1A
STOML1
PPM1E
NME1
NET1
MED13
NUF2
RPS19
IKBIP
APAF1
UMPS
RAD51
RABL2A
NAT10
BICDL1
MYO5C
IPO4
REXO4
ZNF79
ZNF331
DHODH
PDXDC1
VPS33A
PRCP
DDIAS
PWP2
LOC102724159
TACO1
NDUFB3
FAM126B
ROPN1L
GALK1
KLHL24
WDR35
STMN3
SLCO4A1
BCAS1
INIP
SPATA2
CENPBD1
GET3
RFX5
C16orf71
ANKS3
BLM
NEMP1
AGFG2
MSH3
DHFR
DEPDC1B
TP53INP1
ATG14
RSPH1
ATP5F1E
MXD1
PSMD12
PSMB7
DHX37
NUP107
FANCC
PREX1
PUS1
CDK5RAP3
YIPF4
ATP1A1
DECR1
BCAS2
KIFC1
CFDP1
INTS2
TRIAP1
AEN
CCDC77
KDM5A
RACGAP1
LTO1
CPLX1
ESCO2
DDX42
CCDC47
TOP1
RINT1
RECQL4
LRRC14
SLC25A24
MDM1
ARRDC4
PIGU
CEP55
TBC1D15
CHRNA5
VPS50
HEPACAM2
CENPH
TFRC
RNF115
POLR3C
ZEB1
ZDHHC17
TUFT1
TMEM150A
LTV1
DLGAP5
KLHDC4
C12orf45
NHP2
GPR89B
JMJD1C
TBK1
XPO4
RRP36
MKI67
RBM48
PEX1
TMEM120B
NBPF15
CNPY3
ZNF367
CDC20
GLRX5
SLC35B1
PDPR
TMOD3
DDX11
AOPEP
EIF3E
RRP1B
HSF2BP
MED6
NOL6
SUPV3L1
DNAH7
C20orf27
POLR2J2
STRADA
PSMD4
ABL2
MND1
LMAN2
TP53RK
PKMYT1
LRPPRC
ABCF2-H2BE1
ABCF2
RNF114
DPY30
NUP54
POLL
DPCD
FRAT1
TCP11L1
E2F4
ARHGEF5
MARCHF10
GRWD1
SMC2
RSRC1
ANKRD46
MXD4
ASL
CCNE1
ATR
DDX21
ZSCAN25
ZNHIT1
PLOD3
ZNF706
WWP1
RNF40
CCDC189
CASKIN2
RAD18
TSEN54
SLC25A19
CCDC88A
DUS4L-BCAP29
DUS4L
COG5
VCPKMT
KIF20A
BRD8
ZGRF1
LARP7
MFSD1
NPM1
RPS29
DDX46
TBC1D13
LRR1
RMND5B
WDR46
PFDN6
CMTR1
NAA35
MDM4
FANCE
METTL6
EAF1
TRIM25
TRAPPC10
LDLRAD3
WFDC3
DNTTIP1
NDUFV1
ATG7
VPS13B
ZNF622
GFPT1
MMP24
MAP3K20
POC5
LRRC29
DIMT1
RPL6
THAP5
DNAJB9
PTPN11
NOP9
DHRS1
RNASEH2A
INCENP
MON2
SUSD6
HMGB1
PCOTH
MIPEP
TEX10
ECT2
PRDX6
SF3B3
COG4
PIP4P2
GSTO2
TMEM199
POLDIP2
SLC35A5
ATG3
HEATR5A
RBBP5
BIRC6
KIAA1586
RPL36AL
MGAT2
CSRNP2
CLPTM1L
SHCBP1
PMS2
AIMP2
RPP40
SEL1L
PRPF18
DLST
FAM171B
CAV2
CCDC86
C6orf89
PLK1
TMEM39A
GPR107
URB1
CEP135
PPAN-P2RY11
PPAN
UTP4
DERPC
CHTF8
MRPL3
FBXW8
PTRHD1
CENPO
ZFAND2A
HEATR5B
GPATCH11
MTX1
THBS3
ASCC3
PRPF19
CENPA
NDUFAB1
BSN
RBM19
ZNF688
COPS3
PDCD11
ATP5MD
AJUBA
SMIM5
TEDC2
NOMO2
COMMD4
NOB1
ZHX1-C8orf76
ZHX1
NME2
PDCD6
IST1
SLC7A6OS
PRMT7
SPPL2A
SPICE1
TBL3
GLE1
IFT88
MELK
ANKRD40
ZC3H3
STRIP1
SLC25A44
PLCG1
KAT8
COG7
BBS5
WDR3
GDAP2
UBE3B
KCTD10
MYBL1
TADA3
ARPC4-TTLL3
ARPC4
FSD1L
CPSF1
WDR74
GTSE1
NCBP2AS2
NCBP2
NGDN
FIGNL1
EEF2KMT
PAM16
AUH
MLYCD
CCNG2
ZNF778
DDX19A
NAGK
RUVBL1
CKS2
GPR89A
UBE2G2
ZNF23
ANGEL1
LSM8
MRPL2
KLC4
BCL7B
PRMT6
C16orf46
TMEM67
ZC3H18
OTULIN
CTNNAL1
PPRC1
CCDC150
PLEKHM3
STMN1
MYG1
DSE
MIGA2
CLBA1
B4GALT7
CD2BP2
PSMC6
TSPYL4
RASAL2
TTLL4
EIF2S1
ATP6V1D
YIF1A
GOLIM4
CDT1
KIF21A
RRP1
FAM174A
WDR53
FBXO45
MRNIP
RRM2B
FBXW2
USP15
TEFM
AMMECR1L
SENP5
PCNX3
LRWD1
ALKBH4
H3-3B
NSG2
FZD6
UFD1
CDC45
DPY19L4
NXF1
SAXO2
EFL1
GFOD2
ZNF3
ALAD
TATDN2
SLC27A2
DAP
ZNF473
VRK3
CFAP54
COMMD2
MESD
FAHD2A
NDUFS6
TADA2B
CCDC96
TOMM22
METTL25
CCDC59
LRRC47
ZC3HC1
RPL14
CACYBP
SURF2
SURF1
NOMO3
RNF31
PSME2
CDK1
NTAQ1
ADPGK
SH3BGR
LCA5L
MCCC1
MAX
TM2D3
CDC25B
PEBP1
CENPW
SPC25
EIF1AD
BANF1
TMEM167B
MFSD5
PCMTD1
PI4KB
DENND2C
C7orf57
TASOR2
TAF4B
RPSA
TTLL5
ERG28
NOC3L
PGD
FAM117B
NOL11
TCTEX1D2
NIPSNAP3A
CEP350
CALU
TUT7
SLC29A2
CPEB4
RHNO1
FOXM1
XPC
LSM3
ZNF410
RHEB
DGKZ
DNAJC25-GNG10
DNAJC25
RBM28
NRAS
TRMT5
SLC38A6
NDUFB2
RIDA
POP1
CYB5B
ZNF680
TECPR1
STXBP3
ZBTB26
CDK9
LMNA
MEX3A
ZNF492
KIF18B
FAM227B
DTWD1
STYXL1
MDH2
E2F8
FANCM
TASP1
HSP90AA1
UQCRC2
WDR20
BCKDHB
MIS18A
NUDT2
KIF24
GDAP1
SPATA33
EEF1D
TIGD5
PTPN1
ZNF383
BZW1
SLC25A36
CSDE1
HDAC2
CAMSAP2
DNA2
NOM1
ELP1
ABITRAM
TMEM258
FEN1
GBF1
VKORC1L1
CDC42SE1
MLLT11
ZNF641
CDC42BPG
THOC3
HJURP
ADCK1
DERL1
TMEM183A
LSS
ETFDH
C4orf46
ZNF148
SUCLG1
SLC39A9
ERH
IQSEC1
CALB1
NTNG1
HCFC2
GLT8D2
POLR3F
DZANK1
RAD51AP1
C12orf4
RHEBL1
SYS1
FAM161B
COQ6
DHX16
NUP160
CIT
SGTB
NLN
PIAS3
KMT5A
DNAJC21
USP10
PDPK1
SLX1B
SLX1A
BOLA2B
BOLA2
SPNS1
SNRPE
RNASEH1
SRD5A1
NSUN2
GPATCH1
PFDN2
NIT1
GKAP1
DYNC1H1
STK3
PPIL1
RHBDD2
GPN1
CCDC121
KIF11
SLC25A16
WDR25
WARS1
POGLUT1
FANCG
TAF1C
APRT
GLRX2
CLCN7
DYNLL2
RELB
CHRNB2
MRPL28
ADAMTSL4
CDC25A
PCNA
SKIV2L
NELFE
BAZ1B
NCKAP5L
ZFAND3
UNKL
C14orf28
USP45
PITPNC1
PRTG
SSNA1
ANAPC2
EBAG9
CENPE
NSUN5
SF3B2
LEO1
ATP5MF-PTCD1
ATP5MF
RNF19A
ERCC3
SPATA17
GPATCH2
KLHL18
KIF9
HAGH
FAHD1
TRMT61B
HSP90AB1
FBXO33
ACBD3
UBQLN1
POLG2
UBR5
PDIA5
TENT2
RAD9A
SMC4
IFT80
PDSS1
SLC39A11
NGRN
RBM45
RCE1
STIP1
SWI5
GOLGA2
DLD
RPN2
MROH8
EHBP1
PIEZO1
LACC1
CCDC122
BUB1B
POLR1B
NOL7
ZBTB9
RWDD1
DARS2
CENPL
USP8
RTN4IP1
QRSL1
DDX23
MTPN
LUZP6
NDUFC2-KCTD14
NDUFC2
RNF139
ZNF726
FAM122A
HELZ
C2CD2L
FDX2
TMEM231
NUP155
MCM3
RPL32
PMPCB
IDH3A
C6orf136
NFATC2
MVK
RFX1
LRFN4
KANSL2
ABCA5
VAMP3
DHX9
EEF2K
EAPP
SOAT1
WDR19
IFT22
PDP1
FAM91A1
HGH1
CA2
USF2
TTLL9
SECISBP2L
METTL3
PDCD2L
RPLP1
ALG8
POLN
HAUS3
PRPF3
SDE2
ZNF142
BCS1L
ANKS1A
IFT74
YIPF2
TIMM29
PLAA
TTC5
CCNB1IP1
C8orf76
COMMD9
LARP4
USP35
KCTD21
CLPTM1
ERCC4
RPP21
YY1AP1
DAP3
EMC8
COX4I1
TSTD2
NCBP1
CAPN7
ANKRD13A
PANK1