ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424141 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◣ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

ZMPSTE24
NDUFS7
KLHL22
CCDC200
METAP1D
UTP20
NPAS4
QTRT1
UBE2L3
YJU2
NUP214
TRMT1
RBM19
RRP15
HTR5A
KLHDC9
USP35
KCTD21
WASHC2C
FAM72C
FAM72A
KLHL18
KIF9
PRAME
METTL1
EEF1AKMT3
VARS1
SPATC1L
CASC3
STAT6
WDR4
FAM72B
NME1
GBA
WDR74
POLR3D
POLR2J3
PPIL2
GRWD1
NLE1
UTP25
PSME3
CRNKL1
CFAP61
UFD1
CDC45
URB1
CCDC86
MRPL27
EME1
OSCAR
NDUFA3
CYP4F11
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
GNL2
LARS2
USP2
EIF2D
DDX21
C16orf71
ANKS3
C16orf46
SCFD2
SSBP1
AJUBA
HSP90AB1
FAM72D
CMIP
LTV1
WDR46
PFDN6
NUP155
ZNF335
MTFR2
ATXN7L2
FANCD2
SLC12A9
PAXBP1
MIS18A
FABP6
EBNA1BP2
CFAP57
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
EXO1
RAB11A
LZTR1
POLR3E
GOLM2
GPATCH4
DPP9
PDE4A
RRP12
POC5
DNAJB12
BRD7
CYB561D1
RPSA
CCT2
TRIP13
BRD9
CRKL
TOP3B
ABCF1
ARCN1
TRUB2
COQ4
TTC27
TMEM248
NUF2
SLC38A7
MRTO4
EMC1
MRPL40
HIRA
UBFD1
EARS2
NDUFA2
IK
GAL3ST4
YDJC
PIGU
SELENOH
ZCCHC24
CDC6
DPH2
DHX37
FBXL13
ARMC10
ADPRS
VPS37D
GTF3C4
DDX31
AP5Z1
KLF16
P2RX6
SNRPE
UNG
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
DUS3L
SUMF1
SMAP2
RAD54L
VPS33A
TRMT2A
RANBP1
CDK7
CFAP410
CFAP299
SHCBP1
CCNB1
WASHC2A
ZNF593
C1orf232
SEC13
ZNF598
MCM7
AP4M1
IQGAP3
NBPF1
ZNF202
TKT
ZNF839
MDN1
PUS1
PGBD5
NBPF15
AKR1A1
THAP7
ZNF74
ATP6V0E2
SMYD5
TBRG4
LUC7L2
FMC1-LUC7L2
FMC1
CLTCL1
PPAN-P2RY11
PPAN
C8orf37
SLC29A3
RABL2B
NEURL2
CTSA
HCFC2
GLT8D2
SF3A3
COMMD4
HPCA
ACOT7
RBM28
LRRC59
YIF1A
GPATCH3
TWNK
MRPL43
IREB2
KCNK5
SNX16
TRIP4
TTC26
RPP40
VPS50
HEPACAM2
ARFGEF2
AARSD1
NOC4L
DDX51
NMNAT1
LZIC
RPS26
SZT2
MED8
TBX1
SHF
SPCS1
GLT8D1
LAMP1
C12orf66
LRRC29
PEPD
FZD1
YIPF3
POLR1C
SLC27A4
TROAP
PSMD9
HPD
PRMT1
CRCP
NOM1
SMN2
SMN1
EDC3
KCTD9
CDCA2
RRM2
NEIL3
CYB5R4
SUPV3L1
GTF2H2
ZNF771
IQSEC3
ACTR6
PLK3
TBCD
PI16
FBXW8
EIF2B3
ALKBH8
NOL8
CENPP
HAGH
FAHD1
DCXR
BCAR3
PMS2
AIMP2
PNO1
WFDC3
DNTTIP1
ESPL1
RBM34
TMEM191B
AURKB
PRMT5
NAGPA
ATP6V0D1
QTRT2
CCDC191
ZSWIM8
STX18
SUPT7L
SLC4A1AP
RAD9A
PAQR4
ZFPL1
CDCA5
DLGAP5
ZGRF1
LARP7
DHDDS
MRPS28
C12orf43
NOS3
TBL3
CZIB
ULK3
MARCHF2
TRMO
KAT5
USP36
GATB
FPGS
ATP5MC2
POLG
METTL26
SPNS1
MPHOSPH10
MCEE
CENPH
ATAD3B
ZBTB17
RFX1
GTF2H4
GAGE2A
TADA2B
CCDC96
INO80B
SLC19A1
TRAPPC9
TRIM44
CENPS-CORT
CENPS
INO80
MED20
BYSL
SWSAP1
GTF2H3
EIF2B1
TIMM44
TRIM41
DHX40
GSN
CFAP298-TCP10L
CFAP298
RAB14
RPUSD4
FAM118B
TOMM22
CNOT4
RIMBP3B
RIMBP3C
COASY
CCNG2
HSPA9
GOSR2
BLOC1S1
CCNC
PSMB3
RPS2
ATG14
GFM1
TRIAP1
SUGP2
ARMC6
DBF4B
RNF121
LOC100133315
PSMC5
FTSJ3
ARPC3
TNPO3
CLPB
APOM
BAG6
MRPL45
NOC2L
UBE2I
DPH1
MRPS15
FAM86B1
SNRPD2
QPCTL
TOMM40
EIF1AD
BANF1
RPL5
NOP16
HIGD2A
POMZP3
SRD5A1
NSUN2
RBBP5
ZBTB45
KIF2C
RPIA
MED15
ECE1
SACM1L
PINX1
KTI12
CBLL1
DMAC2
SLC25A12
SPINK4
ZNF778
RRS1
STAM2
BMS1
DDX41
SRRD
HPS4
CEP85L
GCDH
TRAIP
PSMA1
HSPBP1
TFB2M
CNST
KLHDC4
PAK1IP1
C6orf52
GSTA4
ZNF391
HSPA6
LDLRAP1
SGO1
CEP135
ZNF529
EXOC2
FANCI
TTK
KNOP1
PRKAR1B
STX6
GFI1B
TSC1
RPS8
XRCC2
MRPS23
AGFG2
CCDC77
NEU1
KDM5A
DSTYK
MAK
RABEP2
SFSWAP
UTP3
NADK
PTMS
ZNF408
ARHGAP1
ALG1
N6AMT1
C16orf87
CTU1
CCDC97
ZCWPW2
AZI2
SNX29
MDGA1
RAD51
RNF166
CTU2
TSFM
PPIH
SH3BGR
LCA5L
ANP32E
CYRIB
KCNH2
NEK2
MAD2L1
ACOX3
VTA1
NMBR
THADA
TIMM23
SLC3A2
SLC24A1
FDX2
TFPT
PRPF31
NTMT1
MRPL30
MITD1
PAK4
KIF20A
BRD8
UBXN11
TAF13
DDX49
COPE
NDUFS3
KBTBD4
RPL23A
VAC14
TMEM242
TTC4
LRRC37A3
DLAT
SLC25A26
POU2F1
BARHL1
C6orf89
MRPL1
ANKRD36
UBR3
TPP1
EIF3C
EIF3CL
ZBTB9
TRIT1
TTC16
PTRH1
PSMD14
FOXD2
POTEF
POLR1B
ZNF165
RSRC1
ZC3HC1
HACL1
BTD
MCM10
NOL10
DGCR8
PDE4C
OGDH
ECSIT
MVK
ZSWIM9
LIG1
MYBBP1A
PDAP1
BUD31
RPL32
AMPD2
GNAT2
IARS1
DDX42
CCDC47
PHB2
ZNHIT6
CCDC113
TELO2
METAP2
RNF40
CCDC189
MCOLN1
RRP1
ZSCAN22
SMG7
SMTN
XAB2
NR1H3
ACP2
HNRNPH3
PBLD
PLEKHG2
HEXA
NDUFAF6
CCNE2
RNMT
FAM210A
MEA1
ATP6V1H
DOHH
GTF2H2C_2
GTF2H2C
ZSCAN21
RPL37
SPOCD1
C5orf51
SPRYD4
EEF2KMT
WASF2
LGR6
ANAPC10
ABCE1
SLC25A46
FAF1
SF3B5
RPGR
RBM42
CKMT1B
C17orf75
RABGAP1
PHF19
MYL6
BUB1B
NOL7
CBWD5
CBWD3
CBWD6
RPS29
RBM48
PEX1
CSNK1G1
ATAD3A
EIF3E
MRPS17
CTNNB1
PRPF40A
ARL6IP6
RPS3A
TIMM23B
PARG
ISOC2
IPO4
TTF2
DDX11
INTS7
DTL
SRPRB
YARS1
S100PBP
TADA3
ARPC4-TTLL3
ARPC4
ETS2
RAPGEF2
BTN3A1
EXOSC5
BCKDHA
KNL1
SYNJ1
SSNA1
ANAPC2
SETD6
TOP3A
SMCR8
RPS27
CNOT6
NOL6
IFT172
ZWINT
KRIT1
ANKIB1
CHMP7
ZSCAN30
PPT2
CHST12
KIF18B
SLC25A51
LONP1
CATSPERD
MRPL24
PARP6
CCDC24
MAPK1
RABL2A
BBS5
NUDT1
MRM2
MED23
RER1
MORN1
SPATA2
RPL38
RTL10
GNB1L
RPL34
HEATR1
CACTIN
IPO13
PITHD1
PLK4
CDK1
CCDC146
AP3D1
RPS19
TMEM9B
CCDC34
STT3B
CIZ1
HDAC1
MINK1
KIF23
WDR62
THAP8
ITGB3BP
EFCAB7
EFTUD2
CCDC103
SLC33A1
TIMM17A
DRG2
ZSCAN25
NDUFAB1
PRRC2B
GPN2
HMGCR
ZNF485
PPP6R3
EPOP
TPM4
CCNA2
POLQ
CDC37
SLC35E1
KDM3A
RIMBP3
FBXO5
IPO11
NSUN5
MOB3A
IZUMO4
RPS5
BICD2
SLC35E2A
SLC44A1
SP8
TRMT6
MCM8
TMEM199
POLDIP2
RABEPK
TOMM6
LSM2
PRDX1
SNRPF
CATSPERG
AURKAIP1
DR1
ERBB3
AKR1C2
KIF15
KIAA1143
LYRM4
FARS2
SNRPD1
NOB1
SNRNP200
MAD2L2
H6PD
ILF2
SDF2L1
ZNF561
FBXW9
XKR7
PPT1
NDUFB2
FNTB
ASB8
UBL5
FANCF
PPP1R13L
POLR1G
MRPL42
C19orf53
TTC21B
ZNF487
EML2
ODF2
KDM1A
TSSK6
NDUFA13
TTC21A
GORASP1
CCZ1
SPACA6
SKA3
MRPL57
MARCHF8
AXDND1
NPC1
MAN1B1
PTCD2
MRPS27
GP1BB
DDX46
MTX1
THBS3
FAM207A
CPPED1
OVCA2
MOK
DNAJC25-GNG10
DNAJC25
RBKS
BABAM2
WDR36
P4HA1
UBE2G2
GFM2
EEF1D
TIGD5
MRNIP
DCAF10
RCCD1
CALM2
PPP2R5A
SNAP29
PI4KA
MST1
RPL7L1
GTPBP3
ENDOV
GTPBP10
FLAD1
PRMT3
RAB5B
LAMTOR3
H3C2
MRPL55
PHACTR4
MCTS1
TJP3
NUDT15
LTN1
UBE2Q1
EXOSC3
TMEM203
NDOR1
MARCHF7
DNAJC28
ISG20
TFIP11
RTF2
NUP35
SLC39A11
RBSN
BOD1
LOC100287896
LIPT2
IKZF4
SLC9A1
ANXA2
DPP3
PSMB7
SIRT4
SNIP1
BRK1
PPIF
DGCR6L
METTL14
MEPCE
TTI2
ZCWPW1
XPO5
POLH
PC
PCNP
TBCK
AIMP1
CACNB3
VWA7
TMEM186
PMM2
ZSCAN2
KLHL20
SLC35A2
PKD1
FOXS1
WASHC5
NSMCE2
L1CAM
TXNL4A
ADK
WDR3
GDAP2
CDK5RAP1
AP3M1
RBFA
DUT
ACBD3
TFB1M
MRI1
LTA4H
SKAP2
MEIS1
DUS2
DDX28
PWP1
RAD51AP1
C12orf4
ADCK1
DNAJC30
BUD23
FBXW2
PLEKHM3
DHX34
H4C8
SERINC4
HYPK
WASHC1
FAM13A
KLHL12
CEP162
RACGAP1
MRPS18C
HELQ
MTBP
MRPL13
ZRANB2
HMGN4
PLIN3
BRCA1
POLR3F
DZANK1
TAF4B
LAMTOR5
B3GNTL1
NECAP2
LRRC57
HAUS2
GTF3C5
MAPK8IP3
CCDC174
STT3A
ZDHHC12
RFC3
MRPL4
TSN
RRP9
PARP3
COG2
MCRS1
SNRNP70
VPS26B
NCAPD3
MTIF2
RINT1
FIGNL1
UBOX5
FASTKD5
INO80C
LRIG2
C9orf16
BLM
GTPBP4
AEN
B3GAT3
DPY19L4
TACO1
CNTRL
ZPR1
C5
TIPRL
KDM4A
CFAP36
SLC35E2B
RPL7A
MED22
RAC1
NRROS
SF3A1
CCDC157
ADSL
RPS27L
THOC1
HNRNPH1
USP14
SPDYE14
SPDYE10P
PAFAH2
CASTOR2
ADPRHL1
ZNF280A
EEF1E1
FAM86B2
ZCCHC7
PRKAR1A
TTC31
CCDC142
ACIN1
SUPT6H
SDF2
GRPEL2
SNRPB
SLC13A3
ATAD2
OIP5
NUSAP1
DCTPP1
LRRC46
HARS2
HARS1
CCDC15
ZNF324
CCDC107
HDDC2
IMP4
CCDC115
RTEL1
MRPL11
ZNF398
SIRT3
PSMD13
ANXA7
SNAP47
JMJD4
ZNF425
FAM3C
KMT2B
HNRNPUL1
RHBDL1
MAK16
NTAQ1
PES1
SLC25A16
UTP6
TCP11L2
INCENP
TAF6L