ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089506 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX20532172: hESC H1

◢ SRX20532173: hESC H1

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◣ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
NPAS4
HEATR6
PARD6B
TUBD1
RPS6KB1
PSMD6
BRIP1
ARFGEF2
ZNF217
IQGAP3
PFDN4
METTL1
EEF1AKMT3
TSR3
GNPTG
BCAS4
USP32
MOK
UNG
DYNLRB2
HIPK1
SUMF1
SNX16
XKR7
TRIM37
FBXO32
APPBP2
SLC12A9
FBXO5
FAM72C
FAM72A
MCM7
AP4M1
CCDC200
TEX14
RAD51C
PPM1D
SKA3
MRPL57
NCOA3
NAGPA
SMYD5
PHTF1
C3orf14
VPS50
HEPACAM2
CSTF1
AURKA
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SFSWAP
DHX40
C8orf33
C12orf66
SAP30BP
RECQL5
SCRT1
BARHL1
CREBRF
CCT2
CRBN
UTP20
RAD54B
NOTCH2
TRIM33
YPEL2
HSDL1
DNAAF1
WDR4
RMDN1
CPNE3
TCTN2
HSF1
BOP1
FANCI
RUVBL1
HCFC2
GLT8D2
PGBD5
ATG14
NBPF15
HTR5A
NCAPH
NEURL2
CTSA
IQSEC3
MCM10
RSPH1
RAE1
NUP214
TROAP
SGO1
ATXN7
THOC7
CPLX2
RNF166
CTU2
CEP128
RRP15
ZNF331
CCNB1
PPM1E
TOMM70
LNP1
RAB22A
ZFYVE1
CLTC
TRMT61A
DDX42
CCDC47
TTK
FAM214A
PUF60
ZFYVE26
NGDN
SMG8
ATXN1L
TTF2
NCKAP5L
DYRK1B
ATG101
SLC45A3
CCNA2
BIRC5
TADA2B
CCDC96
MED20
BYSL
YIF1A
POLR2J3
CCNG2
GRWD1
TRIP13
BRD9
DYNC2I1
VARS1
KLHDC4
SPPL2A
RNF40
CCDC189
MAX
INCENP
CYB561D1
DCLRE1B
AP4B1
FBXL3
XRCC2
C16orf46
FAM72B
DDX11
VRK1
SKA2
PRR11
NUDT1
MRM2
FAM91A1
USP10
LOC101928764
NAA25
STOML1
ANGEL1
SPTLC1
UBE3B
KCTD10
TTLL11
GMCL1
AEN
NUP107
SART1
C16orf71
ANKS3
LRRC29
MFSD1
CENPBD1
MRPL52
NEMP1
EBAG9
EIF1AD
BANF1
ECT2
SLC35A1
TMOD3
NOL8
CENPP
L1CAM
SAXO2
EFL1
RNFT1
ZEB1
TTC27
UBE2C
TASOR2
CBLL1
NDUFAF6
CCNE2
VGF
WASHC5
NSMCE2
METTL3
GFOD2
SPAG1
PPM1B
ANKRD46
LYSMD2
TMOD2
SKIV2L
NELFE
DNAJA3
TDRKH
HMGCS1
MAPK8IP2
CHUK
TACO1
TRIM4
RABL2A
RPP40
HAUS7
CCDC146
RRP1
SIKE1
AUH
DDX49
COPE
MOCS3
DPM1
TF
ARFGAP1
EDC4
TOPBP1
PTGFRN
ACOX3
TRMT61B
ATAD2
TMEM150A
FIS1
PRKAR1A
SLC25A40
DBF4
DHX37
TTLL9
SYVN1
NUB1
FANCD2
DLGAP5
MKI67
RHEBL1
INTS1
EXO1
TOMM22
NET1
MEA1
RNF31
PSME2
TPTE
TAF5
SF3B3
COG4
ANKRD52
SLC15A4
KIFC1
RACGAP1
POLR2J
AP4E1
CYP51A1
PPP1R12B
HAGH
FAHD1
UTP23
MCCC1
ATG7
EIF3H
AMZ2
PDE4DIP
SUPT7L
SLC4A1AP
NDUFS3
KBTBD4
ASNS
STX16
C20orf27
ATG2B
GSKIP
TBC1D13
STRN3
AP4S1
DDX19A
DSCC1
SLC35B1
ZHX3
PPP1R16A
TBX2
GUSB
OSGIN2
ASPM
KIF14
ZFAND2A
INPP5K
PSMC1
LMAN2
ADAR
HOMEZ
LCMT1
VANGL1
SGO2
EIF2D
TWNK
MRPL43
TCP11L2
SLC25A26
ANAPC7
KLHL24
DUS4L-BCAP29
DUS4L
COG5
NOL6
EIF3C
EIF3CL
THOC3
ATP6V1C1
ZC3HC1
VIRMA
ALAD
SLC25A24
RABL2B
GTF2H3
EIF2B1
SNRPC
ZC3H3
ATP5MPL
CDCA4
SPG7
EEF1E1
RPGR
BICDL1
EFCAB6
U2SURP
TRAPPC10
SRPK2
RFC3
TCF19
CCHCR1
NDE1
MARF1
MED13
BMP7
NTNG1
DDX21
TSFM
PEPD
ZC3H18
METTL2A
DNAJC21
GNA13
CSDE1
LEKR1
IPO4
ARMC2
GOLGA5
GDPGP1
CIB1
CKAP5
AFTPH
H3-3B
C8orf76
PSEN1
ZHX1-C8orf76
ZHX1
RHBDD2
AZIN1
NANS
E2F4
IARS1
ESPL1
RFC2
SSBP2
CNIH4
TERF2IP
KARS1
COX19
ATP5MG
H1-10
MIS18A
GCDH
PDXDC1
ZNF529
TBC1D30
PDSS1
GNS
URM1
ARPP19
MYL5
ATP5ME
GLRX5
FRAT2
TBC1D23
NME1
KIF18B
DZIP3
CIP2A
POLQ
SPC25
EEF1D
TIGD5
METTL25
CCDC59
MRPL11
PRPF18
DOHH
FBXO33
NUDT3
CPSF1
KPNA2
CENPN
MDM1
GTPBP4
RTF2
APH1A
MXD1
TMEM18
GFPT1
GLE1
HEATR5B
GPATCH11
MBTPS1
ROPN1L
RSL24D1
CCDC15
IDH3A
SQLE
SMARCA5
XPOT
DUSP11
SH3BP5
B3GNT2
FAM185A
MFSD14B
SUPT4H1
TRPM7
SPATA2L
LLGL2
OXNAD1
DPH3
NDUFV1
YWHAG
VCPKMT
INTS8
GATAD1
GNPNAT1
DNAL1
ITGB1
MAD1L1
COPZ1
CCDC86
CDK1
AGFG2
CCT5
ATPSCKMT
MSH3
DHFR
RFWD3
SUB1
COX5A
PRIM2
DSTN
GPSM2
NDUFS6
HELZ
GPATCH4
ZBTB9
USP30
RMC1
PCNX3
KLF10
PIAS3
CDK9
TRIM45
KCNH6
PCLO
EDC3
MRPS23
SEL1L
DNAJC2
DNAAF2
TBK1
ATP5MF-PTCD1
ATP5MF
ZNF706
TMEM60
PHTF2
UBR5
GPR146
RRP12
SHCBP1
TSEN2
PPIL1
FAAP24
CEP89
SPATA33
DERL1
TUBA1A
ACTR3
ARHGEF5
TIMELESS
NHP2
OAZ3
AARS2
LOC100289561
SELENOS
E2F5
SSR3
RAB1A
METAP1D
ENDOV
HJURP
DYNC1I2
CDC14B
GABARAPL2
ARL13B
SMIM5
HAUS5
CNIH1
CMTM6
RRM2
ZFPL1
CDCA5
FAM227B
DTWD1
LRFN4
ZFAND3
PDF
MAD2L1
DUS2
DDX28
IPO11
LTO1
PDAP1
BUD31
TEX10
VIPAS39
AHSA1
CTDSP2
DENND2C
NOC4L
DDX51
PTRHD1
CENPO
BBS1
NAA20
NAMPT
IFT22
PRMT6
URB1
PTPN1
OS9
WDR77
ATP5PB
MPHOSPH6
TM9SF1
PLEKHM1
SWI5
GOLGA2
EIF1AX
FERMT2
LYRM4
FARS2
ECSIT
HSPA9
TBC1D15
IDI1
ZSCAN2
DEPDC1B
ZNF79
PSMB7
ZNF383
WDR37
PYCR2
TECPR1
ZNF281
DIP2C
MTFR2
INKA2
DDX20
RXYLT1
FANK1
HPS3
ZDHHC17
SETDB1
NOC2L
CORO1C
KMT5A
PMEL
CDK2
QTRT1
MND1
POLR3F
DZANK1
RNF114
TMED8
SAMD15
VPS13B
RPTOR
GBF1
CAMKK2
MRPL38
PSMD4
METTL17
CDK5RAP2
STK38
ACYP1
TICRR
ZAR1L
BRCA2
LIN52
ALDH6A1
MMS22L
SCRIB
RNF19A
RPL30
GMFB
EHBP1
RNF44
FAM72D
PLK1
RFX1
MKS1
MBTD1
UTP18
WDR35
EEF2K
PRELID3B
OXR1
DNAJC25-GNG10
DNAJC25
NPM1
PWP2
LOC102724159
CFDP1
POLR3B
COPS3
ASCC3
RBM25
TMED10
SNF8
SPOP
ACBD3
TADA3
ARPC4-TTLL3
ARPC4
TOGARAM1
KLHL28
ZSWIM3
ACOT8
TP53INP1
RNF181
NFAT5
AP2A1
TRIM59
PLCL1
SUMO3
RHPN1
MATN3
NEIL3
RNMT
FAM210A
REXO4
CCDC58
FAM162A
LINS1
ASB7
SLC35A2
MTG1
RNF139
CYB561
AGK
PREX1
RETREG1
NUF2
BLM
UBXN11
COMMD1
SH3BGR
LCA5L
HSPA5
USP14
CGGBP1
SLC52A2
FBXL6
SKP2
LMBRD2
CALCOCO2
ZNF654
WIPI2
TXLNG
COQ5
RANBP9
FBXL13
ARMC10
NOB1
XPC
LSM3
TM2D3
STX4
MDM2
UQCRC2
NRBP1
BDH1
TRMT1
SPNS1
GATB
NRAS
LRRC37A3
TMEM129
TACC3
TARS3
UBXN7
SLC31A1
FKBP15
MAEA
ATP1A1
SUSD6
RAD51
TRUB2
COQ4
S100A13
CHTOP
FANCC
RAB5B
ZNF212
GEMIN5
GUK1
ZBTB11
USP8
NARF
KAT8
SCFD2
GAR1
TMED5
CCDC18
SLC30A5
SCRN3
CIR1
POLR2J2
ARSG
YY1AP1
DAP3
KBTBD8
SLC16A6
SMC3
TEX2
CUL2
ADIPOR1
ZNF888
TRIM56
AP5Z1
ZNF473
VRK3
CS
PYCR3
ZNF3
LIX1L
HIP1
DISP1
CKAP2L
SRPRB
LSM14B
TMEM258
FEN1
ELAC2
CHFR
C14orf28
EDRF1
DLD
MAP2K2
CSRNP2
LOC102723996
ICOSLG
AURKB
FBXW8
XPO5
POLH
FANCM
VPS11
SLC25A19
NAA35
ABCF2-H2BE1
ABCF2
SEC61B
TMEM183A
SDE2
CEP164
STRIP1
PPM1H
PHETA1
CALB1
NEK2
KNOP1
MFSD4B
RFC1
RPL32
RECQL4
LRRC14
GFUS
CNBP
MTPN
LUZP6
POC1B-GALNT4
POC1B
CBLB
IMPA1
SNX11
GALNT4
GK5
UPF2
PXT1
KCTD20
SNX4
LGALSL
NEU3
DNAAF3
HELZ2
PCOTH
MIPEP
VAC14
CFAP298-TCP10L
CFAP298
CKS2
NARS2
TMEM250
ANKRD28
YWHAQ
FSD1L
UBE2V1
UNC119B
SLC27A3
SSNA1
ANAPC2
STYXL1
MDH2
CNPY3
WDR81
EIF2S1
ATP6V1D
DOP1A
MYBBP1A
CRELD1
MTX1
THBS3
JMJD1C
DPAGT1
SPTLC2
C7orf50
MTMR14
CELF6
SENP5
STRN
PSMD2
GPANK1
CSNK2B
MTCH1
PAWR
IREB2
PUS1
GSN
RAD18
RAB14
MAT2A
TONSL
NBN
EDEM3
ARL8B
SF3B2
RMI2
UBR7
GON7
PRDX6
GPATCH2L
ING4
RC3H2
HELLS
DCTN2
SLX1B
SLX1A
BOLA2B
BOLA2
PIGU
WIPI1
LARP4
WDR43
COX14
GOLGA3
L3HYPDH
JKAMP
SLC35A5
ATG3
MTIF2
LRRC47
EIF3K
FRAT1
TRAFD1
SETD1A
ZNF263
SRRT
PRPF38B
TRIB1
YWHAZ
DMWD
RPS6KL1
LTV1
COMMD4
SPG21
QSOX2
UBE2G2
PDZD11
KIF4A
COA8
BAG5
TMEM127
CIAO1
TTC13
ARV1
PMPCB
AP3B2
ENTPD5
BBOF1
RAB7A
MSH6
TMED9
FBXO43
GTSE1
RPIA
C12orf45
NKIRAS1
EIF3E
DNAJC30
BUD23
GTF3C2
NEK4
RTKN2
VKORC1L1
DENR
FLCN
TSPAN10
NPLOC4
C5orf15
MCUR1
PIP4P2
RPL15
PHLPP2
RNF10
RPS6KA4
DNAH7
INTS2
NUDT4B
NUDT4
PRKAB1
MLEC
NUP153
NUP160
BAZ1B
ZSCAN25
OTULIN
CHID1
RPN1
RALBP1
TEDC2
WDR19
NOMO3
CAPZA2
ERLIN1
USP49
LEMD3
SIPA1L1
TGOLN2
PPM1A
TRIAP1
ZNF688
PPRC1
TMEM203
NDOR1
MORN2
DHX57
NGRN
HIF1A
SEC11A
GOLGA1
PIP4P1
UMPS
DNM1L
RIPK2
TRIM25
POM121C
RAB21
AP1S1
RNF4
PFKP
MACROD2
RAD54L
MRPL27