ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089509 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX20532172: hESC H1

◢ SRX20532173: hESC H1

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◣ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
PSMD6
TUBD1
RPS6KB1
HEATR6
TRIM37
IQGAP3
TEX14
RAD51C
PFDN4
DYNLRB2
BRIP1
UNG
NPAS4
APPBP2
USP32
PARD6B
HIPK1
YPEL2
BCAS4
SGO1
PPM1D
FAM72B
XRCC2
ZNF217
FAM72C
FAM72A
SLC12A9
RNFT1
ARFGEF2
C3orf14
KLHDC4
CREBRF
NCOA3
FANCI
ZFPL1
CDCA5
RNF166
CTU2
METTL1
EEF1AKMT3
MOK
SKA3
MRPL57
BIRC5
PPM1E
TICRR
POLQ
FANCD2
BARHL1
DHX37
CYB561D1
TRIP13
BRD9
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TROAP
PHTF1
GABARAPL2
SCRT1
NCAPH
SKA2
PRR11
UTP20
KAT2B
FBXO5
RRP15
CRBN
SLC45A3
NOTCH2
SMG8
TTF2
WASHC5
NSMCE2
RAD54B
DCLRE1B
AP4B1
FAM72D
RAB22A
DZIP3
CIP2A
NUF2
DLGAP5
CSTF1
AURKA
ATXN7
PDE4DIP
DHX40
CPEB4
ZHX3
SIKE1
CCNA2
HSDL1
DNAAF1
CKAP2L
SAP30BP
RECQL5
SUMF1
C16orf46
C12orf66
UBE2C
NUDT4B
NUDT4
ZEB1
DYRK1B
SMC2
INTS1
HTR5A
ZNF331
DOP1A
FAM214A
OAZ3
CCT2
SHCBP1
GPR89A
ROPN1L
HCFC2
GLT8D2
MOCS3
DPM1
CCDC200
MYL12B
TASOR2
NET1
FBXO32
HSF1
BOP1
BICDL1
RRP1
MTMR14
SPAG1
FAM207A
TRMT61A
EIF3C
EIF3CL
GTF2H3
EIF2B1
KLHL24
TTLL11
KIF14
LOC101928764
NBPF15
DDX11
RUVBL1
HELZ
TWNK
MRPL43
ING4
RACGAP1
SPPL2A
NBPF1
NRAS
ESPL1
CS
NEIL3
CEP128
TRIM33
DNAH7
BMP7
PWP2
LOC102724159
KPNA2
NHP2
TMOD3
RAD51
ABCA5
GNAI3
NEURL2
CTSA
NEMP1
SNX16
TBX2
EXO1
ZFYVE1
MCM7
AP4M1
ATG101
QSOX2
SEC22A
MIS18A
LYSMD2
TPTE
AP4E1
WASHC2A
IQSEC3
POLR2J3
RNF114
ATP1A1
PRKAB1
METTL2A
MCM10
KLHL36
TBC1D30
GNS
NDUFV1
PRMT6
SLC27A2
LIX1L
SLC25A24
VARS1
PRKAR1A
CCDC86
ZSCAN2
MRPS23
CENPN
APH1A
RRM2
PLK4
KIFC1
FAM227B
DTWD1
CLPTM1L
VRK1
GNA13
C20orf27
AZIN1
RAE1
THOC7
TSEN2
AP3B2
IPO4
RHNO1
FOXM1
CFAP69
PRELID3B
RRP12
BUB1B
SH3BGR
LCA5L
NUB1
MKI67
NTAQ1
NAA25
MYL12A
RPS6KB2
XKR7
L1CAM
ATP6V1C1
C8orf33
TCTN2
CALCOCO2
CCNB1
CENPBD1
C16orf71
ANKS3
MED20
BYSL
FBXO43
RNF40
CCDC189
TADA3
ARPC4-TTLL3
ARPC4
ERN1
GRWD1
WIPI1
PRPF18
TRPM7
ATXN1L
MTFR2
CHFR
DDX49
COPE
GTSE1
ATG14
RHEBL1
FAM210B
MAX
GTPBP10
MYG1
TTC27
MAPK8IP2
TOLLIP
TXLNG
MYBL2
CCT5
ATPSCKMT
TBC1D13
INCENP
LTV1
BLM
C11orf24
GPSM2
TAF4B
TP53INP1
SLC25A25
NAIF1
SNAPC4
CFDP1
NXF1
GPR89B
SMYD5
DIMT1
NOMO1
MXD4
NME1
NUDT2
KIF24
ZFAND2A
MBTPS1
PCNX3
SKA1
RAD18
SLC52A2
FBXL6
DENND2C
AURKB
TMOD2
PPP1R16A
KLF10
ZNF778
SLC25A19
CDT1
MED13
SCFD2
KIF18B
NDUFAF6
CCNE2
TEX2
LRRC29
ZC3H18
DERL1
GFPT1
NOL6
CPLX2
SLC35A5
ATG3
NCKAP5L
XPOT
CYB561
MLYCD
LATS2
POLR2J
ALAD
CSDE1
PLK1
DUT
ZMAT3
METTL17
TRIM45
WDR4
SRPRB
C6orf89
VANGL1
PREX1
SGO2
DHODH
CASKIN2
TSEN54
GFOD2
TUFT1
IPO11
LARP4
NUDT1
MRM2
PSMD12
TTK
BUB1
CDC14B
PDXDC1
GABPB1
LSG1
FIS1
LRPPRC
RTKN2
DBF4B
ATP5F1E
LTO1
HEATR5A
PLEKHM3
ARSG
SLC16A6
ACOX3
IQCG
TRMT44
LMLN
HAUS7
ASB8
NAGPA
RTF2
P2RY2
SLITRK3
PIAS3
GALK1
PUF60
MON2
TSFM
UTP23
PSRC1
ZNF821
TOP1
KPNA1
SPTAN1
KMT5A
RABL2B
TFPT
PRPF31
RMDN1
OSGIN2
CPNE3
PDP1
ESCO2
GOLGA3
CALR
STOML1
GFI1B
DEPDC1B
TSC1
FRAT1
DSCC1
SUV39H1
GCSH
SLC27A3
TCF19
CCHCR1
DKC1
COTL1
PRCP
DDIAS
PGBD5
USP54
QTRT1
NUP107
SFSWAP
PTPN1
SART1
RIPK2
BCAS2
AACS
ZBTB9
NIPSNAP3A
CCNG2
CLTC
MRPL11
RNF121
LOC100133315
CIT
DYNC2I1
FDX2
REXO4
RSPH1
MFN1
SPEF2
PSMA5
LLGL2
SMAGP
CACNG4
NEK2
COX14
HSPA5
DCTPP1
AP2A1
GTF3C4
DDX31
ANAPC7
UFD1
CDC45
MARCHF8
TSR3
GNPTG
PTTG1IP
WDR74
EDC3
DUS2
DDX28
EIF2D
NR4A2
SLC25A44
MIGA2
HARBI1
ATG13
MYO5C
TRIAP1
METTL3
GLE1
TBC1D31
HAUS5
LRP10
PIGU
DIAPH3
SPATA33
TMEM120B
ANKRD28
FLCN
CLCN7
CCDC146
CHIC2
PYCR3
CKAP5
SLC35A2
DMXL2
ATR
DDX19A
ETFDH
C4orf46
UTP4
DERPC
CHTF8
CSRNP2
EEF1E1
SLF2
SPG7
RABL2A
PDSS1
PRMT3
PRPF19
CCND3
ZNF622
RAB5B
MRPL2
KLC4
GRB2
MYO5A
POC5
NKIRAS1
NR1D2
COPS3
USP14
SWI5
GOLGA2
PLCG1
KLHL20
MFSD14B
SPATA17
GPATCH2
GCDH
CEP55
SPC25
CREB3L2
RFWD3
ZNF148
STRIP1
CBLB
TMEM129
TACC3
LACTB
MRPL28
ARMC2
ATAD2
C12orf45
NOP9
DHRS1
MAPK8IP3
C8orf76
WDR3
GDAP2
UBE3B
KCTD10
TACO1
BBS1
CALM1
EXOSC5
BCKDHA
FBXW8
SRD5A1
NSUN2
MACROD1
SNRPE
PPP1R12B
HPS3
CNTRL
C5
GATAD2B
URB1
MAD2L1
MRPL27
EME1
SLC25A26
FITM2
TTLL5
ERG28
ARFGAP1
CDK5RAP2
NMD3
NTNG1
KLHL18
KIF9
FAM117B
POLL
DPCD
TOP1MT
NEK11
ASTE1
PCYT1A
KCTD13
DICER1
NOC4L
DDX51
EIF3B
RUBCN
WWP1
SARS1
SERINC3
LRRC37A3
SQLE
TRIM25
CORO1C
PRR29
KLC1
RBM19
SSNA1
ANAPC2
NOB1
IFT88
SF3B4
NEK10
SUSD6
TMEM71
PHF20L1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
RPGR
SAXO2
EFL1
KATNIP
GTF3C1
ARNT
SYNJ2BP-COX16
SYNJ2BP
ZGRF1
LARP7
MFSD5
WDR59
ZKSCAN8
NOP16
HIGD2A
WDR61
PDCD2L
DOLPP1
SPEF1
VPS4A
CHRNA5
PTGFRN
WASHC2C
WDR46
PFDN6
RTTN
RXYLT1
TMEM67
CLBA1
ERGIC1
NUMB
SSBP2
MRPS14
TDRKH
LSS
RFC1
DYNLL2
NDUFS3
KBTBD4
WDR31
PIP4K2C
FAM117A
VAC14
THOC3
SLC25A46
RECQL
GOLT1B
VPS45
CHCHD6
CDC25B
TRAP1
TMEM38B
INKA2
DDX20
NME2
SAC3D1
PPM1G
PHF1
KYAT1
LRRC8A
ACBD7
FBXW9
ATP6V0D1
NGLY1
TMEM258
FEN1
IFT22
CCDC88A
MCRS1
MRPS21
HEATR5B
GPATCH11
USP8
GMFB
TMEM65
PCOTH
MIPEP
IQGAP1
BANP
MND1
TOX4
RAB2B
UPF2
PPAN-P2RY11
PPAN
WDR62
THAP8
DDX46
TMEM203
NDOR1
CCDC150
INIP
DLST
PRKCA
CARD19
AEN
DEPDC1
SPOP
SETDB1
PITPNB
GSN
RAB14
CKS2
PPIL1
SLC35C2
SND1
E2F4
UCP2
GSTP1
CENPW
SETD4
ANGEL1
LSM14B
ANKS1A
C14orf28
TVP23C
BACE1
PBK
PPRC1
FAAP24
CEP89
FANK1
CENPA
COQ2
GOLGB1
MRPS22
CEP112
VPS33A
RAD54L
MRPL3
GTPBP4
HNRNPF
FBXO33
TAF6L
BCKDHB
CDK1
CDC25C
DNA2
RINT1
MARS1
ARHGAP9
AP1M1
BLOC1S2
PPP2R5B
POLG2
FAM53C
LRGUK
SLC25A14
SLC37A4
ABHD4
IFT57
EIF3E
RPLP0
METTL18
C1orf112
SPATA2
NAA35
MLEC
SPOUT1
DPH7
PRRC1
XPNPEP1
SLC29A3
ACSF3
TADA2B
CCDC96
SEL1L
ZC3H3
TPD52L2
ANKRD46
STYX
ATG2B
GSKIP
PCYT2
SH3BP5
SIRT7
TCOF1
TONSL
SNX27
SORT1
SPCS1
GLT8D1
ADPRS
INTS2
ERAL1
LRFN4
PDIA4
RIDA
POP1
SF3B2
AHCYL1
TSC2
NTHL1
NAP1L1
POLD1
ARHGAP33
SLC29A2
CARMIL3
COG7
PC
USP36
TCP11L2
ENTPD5
BBOF1
CDK9
AMIGO1
UTP25
POLR1B
NEU1
C12orf73
MKRN2
COX19
GLS
OVOL1
TXNL4A
TMEM231
RBFA
C12orf43
C12orf65
TMEM267
KAT7
TRADD
FBXL8
ZMYM5
HRH3
SULF2
CRELD1
TAMM41
IDI1
FAM76A
CDIPT
PEBP1
WDR37
URI1
TNFAIP1
IFT20
ZDHHC17
RPS21
CTDSP2
APOM
BAG6
NGDN
PSMB7
EEF1AKNMT
SSR3
SURF2
SURF1
ARF3
EIF2B2
H3-3B
ASPM
PDCD11
ATP5MD
HSP90AA1
WDR20
ZNF706
FUBP3
FSD1L
ATXN2
OAT
NUDT16L1
SFXN1
CREBBP
CDC25A
PRMT2
LTN1
NUP35
STX16
ANAPC5
TBK1
C11orf49
ZGPAT
ARFRP1
MMS22L
CNBP
TXNDC16
NOMO2
ARRDC4
CHRNB2
GNB5
TRMT12
RNASEH1
PSMD9
HPD
HASPIN
POLD3
TMEM39A
RCCD1
ZNF17
THAP10
LRRC49
ZNF142
BCS1L
RASA2
PLBD2
SPATA7
SLC46A1
SUPV3L1
RAD51AP1
C12orf4
CCDC77
KDM5A
SPC24
FRAT2
TMED10
XPR1
GDPGP1
CIB1
EXD2
GSTO2
INPP5K
ZNHIT1
PLOD3
EDC4
RMI2
GID4
ATPAF2
ZMYND19
CLPX
SVOP
SPTSSA
ITGB4
NOL8
CENPP
COMMD4
ADPGK
E2F8
SPTLC1
PHF5A
ACO2
YIPF4
GET3
RFX5
C12orf29
RNF216
ZFR
KCTD3
SHC1
CKS1B
MIA3
DNAJC2
DARS2
CENPL
ATG7
ZNF212
ABCC10
RRP1B
HSF2BP
TENT5C
MFSD14C
FAM8A1
APPL2
PHLPP2
LMAN2
CHD1L
PRKAB2
GEMIN5
ACBD3
INTS8
NDUFB5
MRPL47
ERCC3
RELA
RGL2
PIP4P2
AP1S1
NUP210
SNTB2
RBM28
DPY19L4
NDUFB2
VPS13B
CBLL1
WDR47
NUDCD1
H1-10
ZNF330
CUL2
TMED9
KDELR2
CRTC2
CA2
BCAS1
IARS1
RBKS