ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2424142 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◣ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

NDUFS7
ZMPSTE24
ARCN1
UBE2L3
LUC7L2
FMC1-LUC7L2
FMC1
CCDC200
DPP9
WDR74
NUP214
KLHL22
TRMT1
PRAME
DNAJB12
PI16
CCNG2
WASHC2C
SLC27A4
RRP15
C8orf37
RBM19
CDK7
EBNA1BP2
CFAP57
ATP6V0E2
MOB1B
KNL1
RAB11A
POLG
HMGN4
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
PPIL2
TTI2
MED16
BCAS3
P2RX6
FBXL13
ARMC10
CASS4
KLHL18
KIF9
SNRPE
RNF166
CTU2
GFI1B
TSC1
CMIP
MCM7
AP4M1
PPP1R11
FAM72C
FAM72A
MED15
PRMT5
PAXBP1
NOS3
QTRT1
CYB561D1
ZRANB2
SHF
RBBP5
METTL26
ATXN7L2
NME1
PAK1IP1
C6orf52
TMEM242
CDK5RAP1
MAN2A2
RBSN
SLC9A1
VTA1
NMBR
DCT
HSPA6
SACM1L
NCOA7
PIH1D2
NKAPD1
SLC12A9
KXD1
UTP20
SIRT3
PSMD13
SIRT4
GAGE2A
UTP25
TRUB2
COQ4
CRKL
DTX2
C16orf46
TRIP4
MARCHF2
PLEKHG2
INTS7
DTL
NBEAL2
ITPR1
MMUT
CENPQ
LARS2
RPS26
MAPK1
POLR3E
SLC25A37
STAT6
STARD10
PSME3
UFD1
CDC45
USP2
SUPV3L1
DDX21
VPS33A
KAT5
ZNF165
ILF2
SMARCC2
TOR1A
C9orf16
POC5
NDUFA2
IK
POLR2J3
NPAS4
POMZP3
LTA4H
TRIM41
CRCP
NUP205
CKMT1B
GYPE
EIF1AD
BANF1
SWSAP1
GFM1
TFPT
PRPF31
PSMB3
CASC3
BLOC1S1
TARS2
RBM28
HSP90AB1
RPS19
TTC31
CCDC142
NDC80
METTL4
STOML2
UNG
TAF6
CNPY4
ADAR
TNPO3
GPATCH3
ENDOV
ZC3HC1
DNAJC25-GNG10
DNAJC25
CBWD5
CBWD3
CBWD6
TRMT2A
RANBP1
TTC27
COMMD4
APOM
BAG6
PDE4C
BRD7
CCRL2
EGFL7
MRPL27
EME1
DDX49
COPE
CRTAP
SF3A3
TMEM101
XAB2
KLHL20
RABEP2
NUF2
NRAS
ALKBH7
TNFSF9
LMAN2
NDUFAB1
TIA1
CCDC174
ATP6V0D1
GBA
MARCHF8
SLC35B1
THAP7
SUOX
PPP6R3
FLAD1
CDIPT
DHDDS
GP1BB
FANCD2
EIF2D
FKBP8
SSBP1
MRPS28
AP1M1
ARFGAP2
RBM48
PEX1
MRPL40
HIRA
CD33
FBXW9
NEK2
SCAMP3
RPL5
APOBEC3C
WIPI1
GNL2
POLR3A
AKR1C2
TOMM40
TM9SF4
VMAC
NDUFA11
TMEM248
UBFD1
EARS2
NAGPA
KTI12
VPS45
PDAP1
BUD31
SEC24C
OBSL1
INHA
SCFD2
BPHL
TOP3B
SMYD5
NEURL2
CTSA
GCK
TAF13
FNBP1
ZNF280A
ADPRS
NUTM1
NOP10
AARS2
C19orf53
HEXA
SELENOH
SLC25A38
GTF2H4
RHEBL1
HPCAL1
UQCC1
RNF121
LOC100133315
IQCG
LRIG2
RPL35A
TCAF2
KRT8
KRT18
SMG8
VWA7
CKMT1A
UBN2
SMG5
BLVRB
FUT1
MRPS15
UFC1
CARD6
RPL11
CRNKL1
CFAP61
FBXO5
HTR5A
MTFR2
IQGAP3
METAP1D
SGO1
FAM72D
CCNA2
FAM72B
BIRC5
METTL1
EEF1AKMT3
NCAPH
WDR4
CCDC86
RRP12
RRM2
CCNB1
C16orf71
ANKS3
RABL2B
RAD51
EXO1
CCT2
C12orf66
AURKB
KIF18B
SNX16
KIF20A
BRD8
URB1
CDC25A
CKAP2L
ZFPL1
CDCA5
GRWD1
DZIP3
CIP2A
IPO4
CCNB2
SKA3
MRPL57
NEIL3
WASHC2A
NOTCH2NLC
BLM
LTV1
SUMF1
FANCI
ESCO2
DHX37
MAD2L1
NOTCH2NLB
NOTCH2NLA
SHCBP1
NOL6
XRCC2
XKR7
NOL8
CENPP
TTK
MOK
EDC3
CYB5R4
RAD54L
SKA1
KPNA2
TRIP13
BRD9
GTF2H3
EIF2B1
ACOX3
CEP135
DPH1
TICRR
TRMT6
MCM8
TMEM186
PMM2
SHC1
CKS1B
RABL2A
NLE1
NAT10
EXOSC5
BCKDHA
TRIM37
MIS18A
SPNS1
PPAN-P2RY11
PPAN
NBPF1
VARS1
GPATCH4
BUB1B
KIF15
KIAA1143
TBRG4
DYNC2I1
IQSEC3
POLQ
NUDT15
ACTR6
WASHC5
NSMCE2
TTF2
GTF3C4
DDX31
KIF2C
SMC2
KIAA0895
RNF40
CCDC189
NDUFAF6
TROAP
PIGU
KNOP1
POLR1B
HMGB1
DLGAP5
SPCS1
GLT8D1
ANLN
NOP16
HIGD2A
CCNE2
KCTD9
CDCA2
NUDT2
KIF24
HAGH
FAHD1
PMS2
AIMP2
PDE4DIP
MCM10
HCFC2
GLT8D2
HEATR1
SLC25A26
PRCP
HEATR6
LYRM4
FARS2
UBXN11
DDIAS
NOL7
CPLX2
POLR3D
KIF23
KIFC1
POU2F1
RPP40
CENPW
PLK4
CDK1
PSMD6
LRRC29
CDC20
GCDH
PNO1
DHX40
COMMD9
DYRK1B
PBK
URB2
TAF5L
TUBD1
RPS6KB1
ZNF778
ATR
WDR46
PFDN6
GTSE1
PUM3
SGO2
DUS2
DDX28
ASPM
TFB2M
CNST
DDX11
CDC6
CSTF1
AURKA
UBE2C
SECISBP2
EIF3C
MDN1
PCOTH
MIPEP
ZNF497
ODF2
MTRNR2L8
DIMT1
TDRD7
RNASEH1
UTP4
DERPC
CHTF8
FAM227B
DTWD1
EIF3CL
SHQ1
TADA2B
CCDC96
MAK16
MRTO4
EMC1
IPO11
SASS6
TRMT61A
DDX19A
COG7
TTC26
WFDC3
DNTTIP1
IMP4
CCDC115
PNPT1
IREB2
TRMT61B
WDR62
THAP8
PUS1
MCOLN1
BUB1
VAC14
GATB
HM13
G6PC3
ATG14
TTLL9
PBRM1
GNL3
RRS1
ZNF331
UTP15
ANKRA2
C5orf51
LOC101928764
TRIAP1
SRPRB
ZGRF1
LARP7
ARMC2
CEP55
RTTN
CREBRF
THOC3
ZFYVE1
LAMP1
TRMO
TRIP12
FBXO36
MND1
BLOC1S3
PWP1
RNF187
CENPS-CORT
CENPS
DIAPH3
PGBD5
BRCA1
MRM3
GLOD4
NOL10
ZNF688
MFSD1
TRAPPC6A
TSFM
PPRC1
NAGK
IARS1
TTLL11
DCLRE1B
AP4B1
TFIP11
PINX1
DYNLRB2
CDC25C
ITGB3BP
EFCAB7
KLHDC4
OGDH
CEP43
RBKS
BABAM2
HSPA9
DYNLL1
NPM1
SNRPD1
BBS5
THADA
DHODH
PRMT2
TWNK
MRPL43
ATAD2
GSN
OIP5
NUSAP1
XRN2
STIL
FDX2
FARSB
MRPS23
ECSIT
SYNJ1
MRPS35
CFAP298-TCP10L
CFAP298
USP32
CASKIN2
DDX42
CCDC47
RAD18
QTRT2
CCDC191
CLSPN
MRPL3
TSEN54
TASOR2
NEMP1
ANAPC10
ABCE1
E2F3
VRK1
RAB14
CFAP410
YARS1
S100PBP
WDR36
GTPBP4
MAPK8IP2
NOTCH2
BARHL1
HMGB2
DPH2
TTLL4
POLR3F
DZANK1
CCDC146
RCL1
VPS50
HEPACAM2
DUS3L
C1orf109
PSMD9
HPD
ZBTB9
AEN
RFC3
RUVBL1
LRRC59
PCNA
CRBN
MVK
PRMT1
CDCA8
NRL
STK11IP
RIOK1
CAGE1
AP5Z1
AGFG2
SLC25A51
CENPN
ZAR1L
BRCA2
MARS2
NOC4L
DDX51
SUGP2
ARMC6
AXDND1
NTAQ1
TSR3
RPUSD4
GNPTG
FAM118B
IFT57
INO80
RPIA
FAM200B
SECISBP2L
UBA52
RTF2
MRM1
PISD
MRPL4
ARFGEF2
PARPBP
NUP37
CDC37
MKI67
SETD4
HIPK1
RAD51AP1
C12orf4
CAMTA1
PPIH
TDG
C8orf33
TAF4B
ATP6V1C1
MPHOSPH10
MCEE
CPEB4
LARP4
FBXO32
HSDL1
DNAAF1
CKS2
C6orf89
ESPL1
GMNN
L1CAM
TSEN2
NUP107
RRP1
CENPM
ASF1B
PDE8A
TOMM22
KAT2B
TMEM199
POLDIP2
GLRX5
ZSWIM8
ZSWIM9
LIG1
TIPARP
SKA2
PRR11
GTPBP10
EEF1E1
ZBTB17
LTN1
RPSA
PDXDC1
ABCF1
TSN
CCDC77
SLC39A6
ELP2
TIMELESS
RPS29
MTRNR2L2
UTP23
DHX33
RHNO1
FOXM1
NBPF15
CWC25
KLHL32
MED20
BYSL
DNA2
C12orf45
PARD6B
VPS35
NUP35
GAR1
SOD2
RNMT
FAM210A
HSPBP1
ZNF593
C1orf232
MTR
SKIV2L
NELFE
H4C14
FBXW8
REXO4
SSNA1
ANAPC2
PTRHD1
CENPO
FAM174A
OXNAD1
DPH3
PPT1
ADAT1
DNAH7
SAR1B
CFAP299
INKA2
DDX20
WDR43
LAP3
YDJC
TXNL4A
SLC35A4
APBB3
DCAF11
SEC14L1
PHB2
STYXL1
MDH2
SDAD1
USP30
PFDN4
SLF2
PPIL1
XPO5
POLH
AP3D1
TMEM231
TIMM23
EFTUD2
CCDC103
NET1
PACRGL
CELSR3
TIMM23B
PARG
REXO5
ERI2
ADPGK
WDR61
IQCH
AAGAB
TEX14
RAD51C
SRD5A1
NSUN2
ADK
STX18
ZBTB49
LYAR
STAM2
PRKAR1B
PWP2
LOC102724159
ASNS
WDHD1
SOCS4
KIF14
METTL3
GDAP1
ZNF202
TXLNA
COPS7B
PALB2
DCTN5
SLC35C2
PLK1
MEA1
PC
NGLY1
ZNF529
ARHGAP11A-SCG5
ARHGAP11A
LSG1
CLTC
CNPY3
CFDP1
APPBP2
ATP6V1H
STAT1
NEU1
DDX18
POLR1F
BRIP1
SPC25
SUPT7L
SLC4A1AP
RSPH1
TTC7A
COX14
TMED5
CCDC18
MCFD2
CARS1
CNOT4
STAT3
LAMTOR5
EIF2S1
ATP6V1D
HSPH1
NDUFS3
KBTBD4
RPF2
TOM1L2
DRC3
EIF2B3
WDR81
E2F8
HASPIN
TRMT5
SLC38A6
TCTN2
ASH1L
LRP2BP
ANKRD37
SPTLC1
SPG21
WDR3
GDAP2
EBAG9
SPATC1L
NOLC1
KLHL12
SNAPC5
RAD9A
SARS1
EIF4H
SLC25A32
DCAF13
NCL
UBIAD1
FKBP1A
STX16
NOB1
NUDCD3
ERLIN2
CENPF
DBF4B
TMEM150A
WDR53
FBXO45
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
YIPF3
POLR1C
MAP3K7
TSGA10
SPRYD4
SLF1
KIAA0825
KDM5A
RIOK3
PABPC1
INTS12
GSTCD
TBL3
BRIX1
PEPD
FANCM
TRIT1
NHP2
SMC4
RAD54B
CEP162
RPL6
H4C15
THAP5
DNAJB9
RRP9
PARP3
SLC25A46
PPIL4
DIABLO
RECQL
GOLT1B
B3GAT3
SETD6
MYBL2
BZW2
ANKMY2
NCLN
ZHX1-C8orf76
ZHX1
ING5
RSL1D1
NDUFAF5
ESF1
CMSS1
NUDT1
MRM2
AATF
CACTIN
MRPL21
IGHMBP2
FAF1
UBE2Q1
SAP30
AP3M1
MRPL1
PES1
POLR3B
DSCC1
CLUAP1
IFT80
TTC4
MTCH2
CSNK1G1
PGK1
WDR27
PARL
C6orf120
L3HYPDH
JKAMP
NCBP2AS2
NCBP2
ZSCAN22
NDUFV1
VPS37A
CNOT7
COG2
TRMT44
TBC1D30
FAM214A
TTC23L
LOC112694756
STX6
USP35
KCTD21
HJURP
TIMM44