ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11399799 | NCI-H1963
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◣ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

IQGAP3
ZMPSTE24
PPT1
ZNF684
BIRC5
TRIT1
UTP20
CAP1
SKA1
RABL2B
QTRT1
RLF
EXO5
NUF2
UTP25
CDK7
PPIE
RAD51
RTTN
RRP15
FANCI
EXO1
C12orf66
TRMT1
FAM72C
FAM72D
FAM72A
BLOC1S3
TRAPPC6A
SHCBP1
DIAPH3
UNG
TICRR
SHC1
CKS1B
ZFPL1
CDCA5
CCNG2
NCAPH
AURKB
POLR3D
MFSD2A
CENPN
KIAA0895
ANLN
MYCL
EDC3
C16orf71
ANKS3
MTFR2
CRNKL1
CFAP61
PEX19
ASPM
SLC12A9
BLM
CCDC86
CEP135
SMYD5
GTSE1
TAF4B
TRMT61A
KIF2C
FAM72B
SLX1B
SLX1A
BOLA2B
BOLA2
BLOC1S1
METAP1D
DZIP3
CIP2A
KNL1
MOK
TTK
FBXO5
DLGAP5
NPC1
HSPA12A
ENO4
RRP12
PUM3
IREB2
ATP6V0D1
PHB2
TTC27
BOLA2-SMG1P6
CCNB1
GPATCH4
CCDC150
MELK
HSPBP1
PTRHD1
CENPO
FAM183A
BUB1
PLK4
SGO2
CCNB2
POU2F1
DYRK1B
SPATA4
CDC16
RIOK3
ESPL1
TOM1
MCM10
ZGRF1
LARP7
HAT1
NBPF1
WDR46
PFDN6
ATP5F1A
HAUS1
KATNAL2
METTL1
EEF1AKMT3
TRIP13
BRD9
BUB1B
KIF18B
RBM19
COMMD6
UCHL3
PRCP
DDIAS
NEK2
HEXA
SASS6
UFD1
CDC45
SCFD2
FAM200B
WDR4
PSEN2
PRMT2
DDX19A
C16orf46
TMEM129
TACC3
DHX37
INTS7
DTL
MRM1
CENPE
DPH1
NEMP1
BCAS3
NME1
WDR62
THAP8
GINS3
GRWD1
ATAD5
MRPS28
CSTF1
AURKA
UBE2C
FAM161B
COQ6
CDC37
ESCO2
HJURP
DMAC1
LRRC29
EBNA1BP2
CFAP57
KPNA2
VPS33A
MAD2L1
POLQ
RHNO1
FOXM1
APRT
CFAP53
PSME3
PACRGL
KAT5
CUL4A
PCID2
URB1
DEPDC1
ZNF24
ZNF778
RNF166
CTU2
CENPW
CENPF
SP4
PIK3C3
MRPL27
EME1
FBXW9
TAF1A
SPG21
CFAP299
RRM2
SMC2
CCT2
CHEK1
UTP4
DERPC
CHTF8
TXNL4A
RBFA
NOL6
ZBTB17
MSH3
DHFR
UBL5
THAP10
LRRC49
MBIP
NOB1
RMDN3
MTHFR
CLCN6
NCKAP5L
HASPIN
TRUB2
COQ4
PPIH
LAMP1
KIF14
E2F2
PUS1
ARMC2
METTL18
C1orf112
IPO4
GLE1
PRPF38A
ORC1
CCDC15
CLSPN
PARPBP
NUP37
WDR61
XRCC2
SPC24
NLE1
CDC20
ALKBH8
SLF2
CCNA2
NUDT2
KIF24
VPS45
VMP1
PTRH2
DIS3
NTAQ1
RABL2A
TMEM241
CKAP2L
PPAN-P2RY11
PPAN
TFB2M
CNST
RCL1
MCOLN1
PIF1
RAP2A
ADAT1
TTF2
RPAIN
NUP88
TIMELESS
VPS35
NOP9
DHRS1
E2F3
AAAS
PSMC3
CHAC1
ZNF680
TRIP12
FBXO36
TPX2
MFN1
SPC25
TF
TOPBP1
RBM34
OSBPL1A
ACTR6
H3C15
H3C14
VPS11
TBC1D30
GNS
MBD1
WDR74
IMP4
CCDC115
ENDOV
RPRD1A
AEN
CDC6
G6PC3
FANCD2
CFDP1
BMP8B
SMC4
IFT80
CFAP206
PIP4K2C
PBK
URB2
TAF5L
ZNF331
RTEL1
CENPM
NUP35
HEATR1
DDX11
TRAPPC8
OBI1
RIOK1
CAGE1
TMEM186
PMM2
UTP15
ANKRA2
TMEM150A
POLN
HAUS3
RPAP1
PCNA
SF3A1
CCDC157
MRPS21
MRE11
ANKRD49
GTF3C4
DDX31
COMMD4
TMED5
CCDC18
SHPK
CTNS
RNF40
CCDC189
SLC35C2
PPP1R10
MRPS18B
POLD3
RNF141
LTV1
PWP2
LOC102724159
C18orf21
NEURL2
CTSA
WASHC5
NSMCE2
STK11IP
CKS2
SLC35A3
CDCA3
CIT
TANGO6
MMUT
CENPQ
NEU1
CEP162
NASP
C18orf32
VARS1
PDCD2L
WDR7
MFSD1
SLC39A6
ELP2
EFCAB6
ASB8
UTP23
TTC7A
MCFD2
PSMC3IP
EIF6
POLR2J3
TOR1A
MRPL1
SNAPC5
CENPS-CORT
CENPS
DBF4B
PFDN2
NIT1
GRN
SLC38A7
SCAMP3
VPS4B
PDZD11
KIF4A
ZNF598
IER3IP1
DIMT1
PSMD9
HPD
NET1
SPATA33
TRAPPC2L
GALNS
SLC30A7
EXTL2
MDN1
TTC31
CCDC142
HROB
DARS2
CENPL
CCDC40
TBC1D16
WDR81
TTC23L
RAD18
PISD
SMG5
HSD17B7
SNRPE
KLHDC4
CDCA4
CDC25A
EPRS1
VAC14
THADA
GAR1
FAM174A
RFX3
TMX3
CCDC102B
SECISBP2
EIF3C
EIF3CL
GMNN
TRMT6
MCM8
RNF187
TEDC1
SART1
ATXN1L
TXNL4B
DHX38
SLF1
KIAA0825
TSR3
GNPTG
INO80
CEP126
TM9SF2
GPATCH3
DSCC1
C21orf58
PCNT
OSTC
USP2
HDHD2
RANGAP1
NAGK
HMGB2
TPM3
CIAO2B
CES2
PIGU
KIFC1
APH1A
MIA3
ZNF200
EXOSC5
BCKDHA
GCDH
MND1
ATAD2
CNIH4
ATF2
WASHC2A
POLR1B
RFC2
CCDC39
OIP5
NUSAP1
SF3B4
HELLS
KIF23
BNIP3L
FOSB
UBQLN4
LAMTOR2
ARHGAP11A-SCG5
ARHGAP11A
TTC16
PTRH1
WDR90
LRRC57
HAUS2
TIPRL
CXXC1
CENPH
TOP3A
SMCR8
CCSAP
MYDGF
E2F4
MIS18A
KNOP1
TFIP11
XPO5
POLH
ADPGK
TBC1D15
TIMM21
FBXO15
RAD54L
THUMPD1
UQCRC2
SPRTN
EXOC8
POLR2M
HAUS6
STAM2
GNL2
RPGR
ZNF805
PPRC1
RFWD3
MCM5
VTI1B
NOL10
RAD54B
SPEF2
BRCA1
SSBP1
C5orf34
TROAP
LTN1
LSM2
MMS22L
AARS2
RBL2
TK1
AFMID
AP5Z1
YIPF3
POLR1C
MAP3K7
NME7
BLZF1
RPS6KC1
RPUSD2
HEATR5B
GPATCH11
MPI
KCTD9
CDCA2
PMS2
AIMP2
DHX33
KLHL12
NUB1
PPIL3
NIF3L1
STIL
CNOT4
RPF2
ADSL
E2F8
PIMREG
NIP7
COG8
SPG11
POLR2J2
UGGT2
PCNP
S100A13
CHTOP
JTB
ATG14
WDR26
FPGS
HPCAL4
CYB5R4
NUP107
SRPRB
DNAH7
MCRS1
COA8
BAG5
KHDC4
ZNF416
SLC25A26
ADPRS
MEA1
ZNF473
VRK3
ADCK1
GPN1
CCDC121
RNF138
TOR1B
AP1B1
NARS1
TMEM183A
ZNF507
RUNDC1
PTGES3L-AARSD1
PTGES3L
RPS8
GATB
VPS18
LETMD1
MRPL12
IDH3A
TTLL9
TRMO
TAF1C
TTC5
DUT
COX19
DYNLL1
METTL3
ZNF202
PIAS3
ZWILCH
RPL4
LLPH
CFAP298-TCP10L
CFAP298
NKX2-1
ZNF497
TTC26
IPO7
ZPR1
SLC25A17
DUS2
DDX28
CARS1
MTX1
THBS3
MPHOSPH6
NAT10
GFM1
RECQL
GOLT1B
PHF5A
ACO2
FLAD1
RMC1
DSEL
PAX9
PDXDC1
SCNM1
LYSMD1
MRPL45
EXOSC10
ARL6
KDM4C
ACVR1
RBBP8
NEIL3
AKIRIN2
RPP40
MYBBP1A
DDX47
PNPT1
DUS3L
FBXO32
KXD1
MED20
BYSL
RTKN2
ZNF74
SRP72
PIK3C2A
ZNF814
ANAPC7
MZT1
BORA
KIF22
NGRN
IFRD1
PKMYT1
MOB3A
IZUMO4
RNASEH2A
AP1G1
ST3GAL3
FAM222A
UBXN11
POLR2C
COL9A2
FANCM
ZNF408
ARHGAP1
CAAP1
NCL
MRPS24
CBWD5
CBWD3
ZNF688
CBWD6
ALG8
ERCC5
NUP133
SDE2
DPAGT1
AOPEP
MTF1
FBXO28
CWC25
RPLP1
EDEM3
FANCG
TPGS2
KAT2A
NOL8
CENPP
TMED8
SAMD15
ESCO1
PDIK1L
STARD6
C18orf54
RPS27L
COQ10B
ARHGAP33
ATP6AP1
NDUFAF6
CCNE2
PABPC1
ZZEF1
CYB5D2
CFAP54
ZNF451
MRM3
GLOD4
CEP43
LRP2BP
ANKRD37
DAZAP2
PAK4
IFT57
GFOD2
MCM3
AP3B2
TOLLIP
DYNC1LI2
TOM1L2
DRC3
C12orf43
DERL1
SEC22A
TADA2B
CCDC96
DPH2
TBL3
CHUK
NOC3L
XRCC6
DESI1
ASH1L
RAD9A
IDI1
PSMF1
CLASRP
SPTAN1
WDR37
POC5
TCTN2
DPH5
OXA1L
PIGC
RGS16
TMEM248
SETD4
ZSWIM9
LIG1
RABGEF1
ZNF107
PPP1R16A
DNAJB1
PDF
MAK16
SNRPD2
QPCTL
NOP2
LACTB
ECT2
KNSTRN
C16orf70
SGO1
APOM
BAG6
POLL
DPCD
ULK3
VPS26B
NCAPD3
SLC7A6OS
PRMT7
RIF1
PCLAF
POLR3B
ERI1
TUFT1
ZBTB10
ATAT1
TAF13
PDE8A
STK4
SSR2
NOP16
HIGD2A
RPUSD4
FAM118B
RRP1
ATP6V1H
KIAA2026
RCCD1
MDM2
POLD2
FOXJ1
RPGRIP1L
FTO
COMMD9
CS
UBFD1
EARS2
EEF1E1
INKA2
DDX20
TDRKH
RNH1
MON1A
TONSL
RIOK2
BOLA1
MCM7
AP4M1
PRMT1
ZNF696
DEPDC1B
KCTD5
KLC2
EID2B
LRRC59
POLR3H
RFC5
FBXL12
TOMM20
SLC25A14
RASAL2
NOLC1
RACGAP1
GOLIM4
MARS1
ARHGAP9
MFSD5
WDR18
MTHFD1
ERCC3
DDX42
CCDC47
KLHL24
IKBIP
APAF1
SS18
RABGAP1
CLN5
SRD5A1
NSUN2
SPPL2A
NUP205
SLC9A8
ABCF1
PES1
VPS37A
CNOT7
SFXN2
ARL3
DCXR
SLC25A40
DBF4
NOMO1
SBDS
UBIAD1
TMEM87A
GANC
GFUS
C18orf25
RAB36
COG7
ANAPC1
SERP1
EIF2A
TMED10
UNKL
GOLPH3L
TEX14
RAD51C
TSSK6
NDUFA13
EPG5
CHM
ACOX3
VPS50
HEPACAM2
FAAP24
CEP89
TMEM9B
SNIP1
POLG2
PRIM2
RBM28
FKBP1A
VPS53
ATG16L1
DNAJA3
NIFK
TATDN3
NSL1
TVP23B
TECPR2
CINP
RPL17-C18orf32
RPL17
PALB2
DCTN5
DDX56
NOP58
AKTIP
PLA2G15
CLCN7
TBC1D14
ZNF322
CYB561D1
ZNF593
C1orf232
DPY19L4
ERAL1
DNMT1
INO80B
DOLPP1
CNDP2
MYO9B
HAUS8
LAMTOR1
PYGO2
LOC101928120
DYNC2I1
RAD51AP1
C12orf4
SRSF11
LRRC40
GGCT
MED28
ARHGEF39
PMM1
WDR3
GDAP2
LONP2
ABCC11
KANSL2
TEDC2
PACC1
PSMD3
ATP6V0A2
INCENP
VPS8
COX8A
SPAG1
COA3
CNTD1
RFC4
SLC12A6
FAM234B
OGDH
FARSB
TMEM231
WDPCP
MDH1
RRN3
SETDB1
HNRNPH2
GLA
CEP128
SAXO2
EFL1
DIP2A
UBA52
LSG1
LOC112694756
DIS3L2
MAX
FAM83D
C1QBP
ARL13B
LSM10