ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089498 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX5389160: Acute promyelocytic leukemia

◢ SRX24188776: BJ

◢ SRX24188785: BJ

◢ SRX20550179: BT67

◢ SRX20550180: BT67

◢ SRX20550181: BT67

◢ SRX017703: CD4+ T cells

◢ SRX5162252: Cytotrophoblast

◢ SRX5162253: Cytotrophoblast

◢ SRX5162254: Cytotrophoblast

◢ SRX687554: Erythroid progenitors

◢ SRX9317679: Fujioka

◢ SRX9317680: Fujioka

◢ SRX10475247: Hep G2

◢ SRX10475248: Hep G2

◢ SRX10477235: Hep G2

◢ SRX10477236: Hep G2

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX2423954: K-562

◢ SRX2423955: K-562

◢ SRX2424141: K-562

◢ SRX2424142: K-562

◢ SRX3322729: K-562

◢ SRX3322730: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX18517813: Keratinocytes

◢ SRX18517814: Keratinocytes

◢ SRX20419390: Keratinocytes

◢ SRX20419391: Keratinocytes

◢ SRX20517420: Keratinocytes

◢ SRX20517422: Keratinocytes

◢ SRX8149391: KMS-27

◢ SRX8149392: KMS-27

◢ SRX10045322: LNCAP

◢ SRX8064821: Lymphoblastoid cell line

◢ SRX8064822: Lymphoblastoid cell line

◢ SRX10921876: MCF-7

◢ SRX11110957: MCF-7

◢ SRX11110959: MCF-7

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◣ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX9187408: MIA Paca-2

◢ SRX9187409: MIA Paca-2

◢ SRX9187410: MIA Paca-2

◢ SRX9187411: MIA Paca-2

◢ SRX9187412: MIA Paca-2

◢ SRX9187413: MIA Paca-2

◢ SRX9187414: MIA Paca-2

◢ SRX9187415: MIA Paca-2

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX11399797: NCI-H1963

◢ SRX11399798: NCI-H1963

◢ SRX11399799: NCI-H1963

◢ SRX9779519: NCI-H1963

◢ SRX17989496: PBMC

◢ SRX17989497: PBMC

◢ SRX17989498: PBMC

◢ SRX17989499: PBMC

◢ SRX17989500: PBMC

◢ SRX17989501: PBMC

◢ SRX7981737: Prostate cancer

◢ SRX7981738: Prostate cancer

◢ SRX7981739: Prostate cancer

◢ SRX7981740: Prostate cancer

◢ SRX4313223: RH-4

◢ SRX20113810: U2OS

◢ SRX20113813: U2OS

◢ SRX20113816: U2OS

◢ SRX20113819: U2OS

◢ SRX20113822: U2OS

◢ SRX20113825: U2OS

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
BCAS3
HEATR6
NPAS4
TRIM37
HTR5A
PFDN4
DYNLRB2
TUBD1
RPS6KB1
BRIP1
TEX14
RAD51C
KPNA2
SLC12A9
ARFGEF2
APPBP2
IQGAP3
USP32
FAM72C
FAM72A
POLR2J3
RNFT1
FBXO32
RFC3
SIKE1
SKA3
MRPL57
TSR3
GNPTG
FAM72D
SCRT1
FAM72B
BARHL1
UNG
NCAPH
BCAS4
DCLRE1B
AP4B1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
HIPK1
FANCD2
C12orf66
PPM1D
NCOA3
NUDT1
MRM2
DZIP3
CIP2A
TRIP13
BRD9
IQSEC3
UTP20
DSCC1
OAZ3
ATXN7
PDE4DIP
RSPH1
SGO1
PPM1E
RABL2A
CREBRF
XKR7
PARD6B
GRWD1
ZNF217
KCNH6
BCAS1
SUMF1
L1CAM
RRP15
SMG8
POLQ
LIX1L
C3orf14
NEIL3
RNF166
CTU2
CSTF1
AURKA
ZFPL1
CDCA5
C16orf46
ZNF331
CKAP2L
XRCC2
DHX40
SAP30BP
RECQL5
ATXN1L
MTFR2
NOL8
CENPP
TTF2
CYB561D1
CCNB1
CPLX2
ESPL1
YPEL2
KIF14
CRBN
SMC2
UBE2C
SKA2
PRR11
BIRC5
RAD54B
FANCI
ZNF696
METTL1
EEF1AKMT3
HSF1
BOP1
TROAP
CCDC86
INKA2
DDX20
WASHC5
NSMCE2
PRCP
DDIAS
WIPI1
RACGAP1
RAB22A
MCM7
AP4M1
ATG14
NTAQ1
NET1
COG7
NOTCH2
DOP1A
GFPT1
RRP12
NEURL2
CTSA
BUB1
TRIM33
NOL6
EDC3
CDC14B
CCT2
TTLL11
ATG101
GFOD2
HSDL1
DNAAF1
TTC27
CEP128
RNF40
CCDC189
TRMT61A
NAGPA
NUF2
MYBL2
INTS2
MFSD1
C8orf33
PGBD5
RMDN1
CPNE3
MCM10
EXO1
TTK
SLC52A2
FBXL6
PPP1R16A
MOK
PRELID3B
BICDL1
NEMP1
MAPK8IP2
TONSL
CCNA2
GTF2H3
EIF2B1
METTL2A
MED20
BYSL
CENPBD1
PIGU
ZAR1L
BRCA2
TICRR
NHP2
AP4E1
ACOX3
NRAS
NUP107
TWNK
MRPL43
AP3B2
BMP7
GTPBP4
TMOD3
DYNC2I1
NOMO3
RRM2
URB1
NME1
KIFC1
TOP1MT
RAD9A
RABL2B
DNAH7
STOML1
TBX2
LTV1
MIS18A
LRRC29
DHX37
NDUFAF6
CCNE2
ABCA5
PWP2
LOC102724159
PHTF1
KLHDC4
ACBD7
WDR4
FAM227B
DTWD1
QSOX2
SPEF2
IPO4
RTF2
RPP40
CEP55
CPSF1
ZHX1-C8orf76
ZHX1
POLR2K
SMYD5
RAD18
EEF1E1
FRAT2
EIF2D
RHEBL1
NPM1
ZNF79
THOC7
GTSE1
IARS1
VRK1
NBPF15
SQLE
MYL12B
RECQL4
LRRC14
TCF19
CCHCR1
DEPDC1B
KIF20A
BRD8
SPTLC1
WDR43
ZFAND2A
MON2
HCFC2
GLT8D2
ATP6V1C1
GGH
TASOR2
RTKN2
POC5
MRPS23
FAM207A
TACO1
PSMD4
NUB1
TOP1
OS9
MED6
DLGAP5
SARS1
ZFYVE1
SHCBP1
EIF3C
EIF3CL
ASPM
PRPF18
RNF114
CDC25B
PPAN-P2RY11
PPAN
PCOTH
MIPEP
PRMT6
METTL3
NDUFV1
NAA35
SNRPE
ERN1
DNAJA3
C11orf49
FEZ2
BLM
MARS2
WDR47
PLK4
RRP1
CENPN
AARS2
CCNG2
RAD51
HEATR5A
TMEM186
PMM2
TTC26
KLHL36
TCTN2
AMIGO1
CLTC
FAM214A
PLCG1
SPC25
MCRS1
ZHX3
ARMC2
ZBTB9
FBXO5
ZNF688
EIF2S1
ATP6V1D
PLEKHM3
SMIM5
DENND2C
METAP1D
AEN
PUF60
LOC101928764
FBXW8
AOPEP
WDR59
IFT22
BCAS2
COMMD9
TBC1D30
RXYLT1
GNS
NIPSNAP3A
TDRKH
GABARAPL2
RFC1
AP5Z1
URM1
NEK11
ASTE1
PSMA5
ATP5MG
TMEM231
YWHAG
TBC1D13
CLBA1
HEXA
PLK1
SLC35B1
ENTPD5
BBOF1
MTMR14
ATP6V0D1
PARPBP
NUP37
CCT5
ATPSCKMT
IFT88
CFAP69
DDX11
CIT
NOMO1
ROPN1L
E2F4
KAT2B
PSMB7
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
VAC14
PRMT2
FANCC
DUS4L-BCAP29
DUS4L
COG5
PRKAB1
IPO11
MOCS3
DPM1
SH3BGR
LCA5L
RMI2
C16orf71
ANKS3
CDC25A
PUS1
CFDP1
EIF3E
SEC22A
VANGL1
AGFG2
RRM2B
ETFDH
C4orf46
ACTR6
DPY19L4
CCDC150
ANGEL1
MRPL27
EME1
ANAPC7
ZNF367
CHCHD3
VARS1
GALK1
SECISBP2
PTRHD1
CENPO
WDR3
GDAP2
SGO2
FARSB
CKS2
TSEN2
PIP4K2C
ATXN3
MARCHF10
HMGB1
SAXO2
EFL1
RNASEH1
AXDND1
XPO4
SNAP25
TRIAP1
NUDT4B
NUDT4
VPS13B
TPTE
SPNS1
FIS1
DUS2
DDX28
GATB
TMEM183A
CYB561
ZNF408
ARHGAP1
APH1A
L2HGDH
DMAC2L
SURF2
SURF1
VPS50
HEPACAM2
TRMT1
INIP
ATG7
CENPA
CENPW
DYRK1B
GOLGA5
USP8
TEDC2
WDHD1
SOCS4
GRB2
PHLPP2
MELK
TRAPPC10
STYXL1
MDH2
RABIF
TMEM67
MBTPS1
AUH
WDR35
ZNF622
HMGCS1
CSRNP2
TTLL9
KLHL20
SENP5
MED13
TUFT1
FBXW2
HELZ
TSFM
ASF1B
RPS29
MRPS21
WDR31
LRR1
TPRA1
MDM4
ATP1A1
MND1
BBS1
SPRYD3
QTRT1
RBM28
ATAD2
RPIA
EBAG9
LMAN2
TEX10
ZGPAT
ARFRP1
CSDE1
WASHC2A
CHD1L
PTPN1
PRKAB2
ZNF789
CDK1
TAF13
HAT1
DNAJC2
SCFD2
LTO1
METTL6
EAF1
RIOK1
CAGE1
HASPIN
RIOK3
METTL2B
TASP1
FCF1
AREL1
NUP35
MET
SLC25A26
ATR
FSD1L
SPATA33
SLC25A19
HEATR5B
GPATCH11
RABEPK
NGRN
RNASEH2A
PRPF19
RCN2
LRPPRC
PSMD12
USP54
COPS3
CDIPT
RAE1
STRIP1
NXF1
GREB1
LSM14B
PRPF6
ADPRS
C12orf45
RBM48
PEX1
NARS2
INTS1
PRPF39
VPS53
TTLL5
ERG28
MXD4
GLE1
RMDN3
TBC1D31
FDX2
RHNO1
FOXM1
POLR2J
STMN3
NTSR2
MRPL3
COMMD4
PDXDC1
ADCK1
PRKAR1A
RPL32
KLF10
GCN1
RSL1D1
CLCC1
ZC3H18
OSTM1
ATP5F1E
NOL11
CAMSAP2
REXO4
DYNC1I2
RPL30
CNPY3
PEPD
GOLGA3
NME2
RBSN
MAPKAP1
IMP4
CCDC115
PWP1
GTPBP10
POLD3
ZNHIT1
PLOD3
TEX2
VPS45
CCDC90B
PREX1
MARCHF8
SNRPD1
PDSS1
MSH3
DHFR
NANS
FAM13B
EXOC5
AP5M1
CLCN7
CRNKL1
CFAP61
THADA
SRD5A1
NSUN2
ZSCAN2
GNAI3
SPPL2A
AMZ2
KCTD13
KLHL32
NDUFAF4
TAMM41
POLR2J2
DPH7
C14orf28
TRMT44
MRPL11
SPATA2
RIF1
NEK10
SLC45A3
ABTB1
C6orf89
SDAD1
TM2D3
TTLL4
CCDC146
REXO5
ERI2
GPR89A
SFSWAP
MAPKAPK5
PYCR3
CUL2
PIMREG
AP1M1
MAPK8IP3
TRIM14
CHRNA5
NOP9
DHRS1
MTPN
LUZP6
SRPRB
MFSD5
ZC3H3
SETDB1
MACROD1
WIPI2
NFATC2IP
CORO1B
RAD54L
TADA2B
CCDC96
TCOF1
RPS16
NOMO2
TMED9
MLYCD
NUDT2
KIF24
FBXL13
ARMC10
POLL
DPCD
PDPR
CCND3
ADAT1
PNPLA8
WDR77
ATP5PB
ALAD
CFAP206
PRIM2
UBXN11
NDUFS3
KBTBD4
PRMT3
CHFR
MIGA2
DYNLL2
MAD2L1
UTP23
PES1
CNTRL
C5
TCP11L1
SNAPC4
ESCO2
UBFD1
EARS2
HM13
ATP6V1H
TAF5
INPP5K
SF3B4
SPAG1
KNOP1
DNAJC25-GNG10
DNAJC25
DNA2
RNF115
POLR3C
ARFGAP1
SPG7
GOLGA7B
KIF18B
PUM3
LARP4
ASNS
ARL6IP1
BRD3OS
ECT2
TUT7
KCNC1
NBPF1
GOSR2
TF
TOPBP1
ANKRD46
ORAI2
SMARCD1
RUVBL1
CENPE
RAB7A
CDT1
FBXW9
ARCN1
NAA25
CYP51A1
INTS4
SF3B2
ANKRD28
PIP4P2
NEK2
DDX19A
WDR81
B3GAT3
DNAJC30
BUD23
NGDN
TMEM129
TACC3
SAC3D1
MMS22L
SRRT
TSC2
NTHL1
VPS33A
METTL18
C1orf112
ZNF107
SEC13
PSRC1
RCE1
BUB1B
ZNF778
XRN2
DERL1
FANCA
MAN2B2
RANBP6
PI4KB
KLHL18
KIF9
UTP4
DERPC
CHTF8
QTRT2
CCDC191
MMUT
CENPQ
KXD1
SLC25A16
PPP1R12B
GDPGP1
CIB1
PROSER1
NHLRC3
PSMA7
NOC4L
DDX51
PUS7
WDR70
ZEB1
LEO1
SWI5
GOLGA2
CACYBP
AURKB
GPATCH4
NUFIP1
GPALPP1
GNA13
MARS1
ARHGAP9
PMPCB
UCHL5
RO60
TBC1D23
EMC8
COX4I1
SAR1A
NOP16
HIGD2A
WDR46
PFDN6
DDX42
CCDC47
TBC1D15
MYBL1
TATDN1
NDUFB9
NUDT15
GAR1
FAM174A
DDX46
KIF11
HSPA5
CREB3L2
RAB5B
SH2B1
CANX
TUFM
HNRNPF
C11orf24
PDIA5
NLE1
ECSIT
INO80
MRPL21
IGHMBP2
NBN
PSMB4
RBM19
PMS2
AIMP2
NOB1
CENPH
CFAP54
S100A13
CHTOP
HGS
ARL16
RIDA
POP1
PIF1
ARHGEF35
SHQ1
NDUFB2
XPO6
PRPF4
CDC26
THAP10
LRRC49
NSDHL
CETN2
HRH3
LRFN4
USP15
FAM185A
PRPF3
MYG1
RABGAP1L
VTI1B
CCP110
SLC27A2
CYBA
DENND1B
GUSB
WDR25
WARS1
TADA3
ARPC4-TTLL3
ARPC4
MYL12A
TKFC
DDB1
DMXL2
CDK5RAP2
WASHC2C
SETD4
PDCD2L
RIPK2
PRXL2C
DIAPH3
DHODH
MKI67
VPS11
GMCL1
STX7
LSS
GOLGA1
EIF3B
HOMEZ
GSTO2
SLC27A3
PPRC1
PALB2
DCTN5
TMED5
CCDC18
VPS37A
CNOT7
MTX1
THBS3
SYT5
ASB8
LIN9
PRKDC
MCM4
SPEF1
MTRES1
SIRT4
RRP36
FICD
WDR74
WDR27
C6orf120
RHBDD2
PEX3
ADAT2
VMP1
PTRH2
IFRD1
RSRC1
CD55
NSUN5
ETFRF1
CFAP94
SPIRE2
AP2A1
SNX4
PDZK1
WFDC3
DNTTIP1
POLR3B
CBX1
FAM210B
DCXR
CS
RNF121
LOC100133315
GPR89B
COX19
TRIP4
POLR1B
TFPT
PRPF31
MEA1
HJURP
FLAD1
NOP58
ASCC2
ICE1
TOMM40
ANAPC10
ABCE1
UBN2
PPIL1
ATG16L1
SCRN3
CIR1
SPTLC2
TARS2
ZDHHC24
ACTN3
SLC25A44
CTTN
LYRM7
OXNAD1
DPH3
RPS19
KLHL24
MAX
TMEM203
NDOR1