ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220468 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◣ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

TINAGL1
BCL9L
SH3KBP1
C2CD4D
ACSS1
GPSM3
KLK6
KCNH8
NOXO1
GFER
MTF2
CDYL
PPDPF
LAMB3
CCDC9B
UNKL
SLC35A5
ATG3
RBM7
C11orf71
FRG2C
LRRC75B
GGT1
HMX3
PDE8A
XRRA1
SPCS2
PLEKHB1
PCDH1
TMEM63A
TP53BP2
NOTCH1
SNAP29
PI4KA
RTKN
CCDC200
NRARP
CFDP1
MYH14
PSMD14
ARHGEF1
ETNK1
DNAJB1
IL17RB
CHDH
HECTD2
LEPROT
LEPR
WDR74
PLEKHG4
ECPAS
ITGA6
TMEM168
SPTBN1
RAB33B
FRMD5
COX19
MTBP
MRPL13
ZNHIT1
PLOD3
TMPRSS3
RASEF
RBM39
ZNF572
THOC1
SLC5A1
OTUB2
SLBP
CNFN
E2F6
TNS2
IRF2BP2
ADAP1
ECHDC2
STK32C
LRRC27
ATAD2
STXBP3
PPP6R1
TLE3
FRG2
COL23A1
TAF15
ABHD11
TTYH3
POR
RB1
NBEAL2
CCDC12
OGA
GCA
IFIH1
SSBP1
USP1
PRDX1
POLG
RHBDD3
EWSR1
PIP4K2B
FMN1
ITGA2
PELI1
CDC42EP3
SLC35E2B
SHF
LDHA
PPP4R3B
RAB4B
MIA
KRT15
MUC3A
SLA2
FOXA2
H3C6
RRBP1
UQCRQ
GDF9
SLC26A8
MAPK14
COBLL1
TMEM209
SSMEM1
PARK7
XKR8
TSKU
FGFR4
MCIDAS
EFR3A
KANSL3
FER1L5
CDK12
OBP2B
ARHGEF17
WWP2
ABTB2
SEPTIN7
LSR
MIA3
GORASP2
RAD21
SUPT20H
GGNBP2
MRPL45
AP3B1
LCN2
IQCH
AAGAB
DDR1
NOL7
KMT5B
PAQR4
PHYHIP
USP3
NCMAP
SC5D
UTP23
NPL
XPA
RUNX1
ATL3
DNAJA4
CABP7
SEPSECS
NUF2
PDP1
SDHC
MPZ
KLF4
STAT3
TES
RNF139
TMEM65
TNFRSF21
PBLD
HNRNPH3
SH3TC2
ARHGEF5
RGS3
LYPD3
NDST2
CPSF4L
RPL26L1
TATDN1
NDUFB9
ESCO1
LMO7
PELATON
CCNI
RABGEF1
LRRC6
ARHGEF38
RPS19
LMF1
PPP1CB
BICD2
PLA2G2E
ZBTB38
SMARCD2
SPATA20
ZNF862
CDC5L
UIMC1
PSMD5
ACOT4
ARHGEF7
GNB2
FAM227B
DTWD1
EIF1AD
BANF1
SMC4
IFT80
ZMPSTE24
TNRC18
TACSTD2
ZNF609
MAT2A
LAMTOR5
C21orf91
PLPP2
TTC23L
IGSF10
LSG1
WDPCP
MDH1
TM2D3
SDHAF1
MAN1A2
SLC30A3
KANSL2
OTUD7B
SPHK2
RPL18
FAM83E
SHOC2
BBIP1
TSC1
GFI1B
SKA3
MRPL57
MEF2A
WDFY2
PLXDC2
PAK4
TARS1
PDE4DIP
MACC1
SPATA5L1
GATM
PFDN4
HBP1
RNF169
SPTBN4
HGS
ARL16
ARID3B
NSFL1C
PPP1R12A
NANP
EIF4G2
DNAJC24
DCDC1
HMGB1
USPL1
ARID2
MRPL33
CDC42EP5
MYL12B
SLC35B4
ERCC6L2
SFMBT1
WDR36
MTIF2
IREB2
CYP2R1
ITGB3BP
EFCAB7
CLTC
TBC1D30
ETV6
EID1
PRKCI
SLC44A1
WDR61
NPNT
PTDSS1
MTERF3
GIT2
ANKRD13A
VMP1
PTRH2
SRSF7
ZNFX1
G2E3
ZCWPW1
MEPCE
DDX52
RNF43
FAM133B
PGBD2
RAB30
CCS
CCDC87
ZNF425
ZNF398
TMEM41B
COMMD6
MRPS31
GBA
ADNP
ZNF143
GSK3A
ASCC1
ANAPC16
C1orf74
RNF103-CHMP3
RMND5A
PSMC4
PTPN4
ZNF473
VRK3
RPL12
LRSAM1
C17orf58
NPTN
NF2
PPP1R11
TPP2
WASL
OGDH
CYRIB
MTERF1
PTPN2
CPSF6
WEE1
GLIPR1L1
CAPS2
SSR3
CCN2
HNRNPA2B1
CBX3
MRPS33
LOC101928764
USP15
ACAP2
EFNA4
PLOD2
ERCC5
ORC5
AATF
SRP19
BUD13
PRR19
PAFAH1B3
SLC24A1
ERCC1
MLEC
CLDND1
LRATD2
CDCA7L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOL11
NECTIN3
EHBP1
TIAL1
LIN7C
CDADC1
ZBTB45
AAR2
TRIM28
SCAND1
KLHL7
SNX5
MGME1
IRF6
ZCCHC4
UBE2B
CDKL3
FZD1
STYXL1
MDH2
GALK2
COPS2
BTBD10
CCDC97
DNAJC27
BTG1
TBC1D31
KLF5
CLN5
USP47
PPP1R9B
ZNF189
MRPL50
ZNF180
UBC
USP48
RPS6
PRORP
PPP2R3C
MAFG
ZNF576
IRGQ
OTULIN
SPTY2D1
ZNF622
KPNA4
N4BP2L1
COMMD2
NCSTN
COPA
DIAPH3
TMEM39A
TTC32
CCDC15
OSER1
PPIB
IQCE
EIF2AK3
RCL1
TRNAU1AP
SERP1
EIF2A
TBPL1
RPL27A
MTHFR
CLCN6
PBX3
CARNMT1
TRMT1L
SWT1
FAM200B
NDUFA5
USP53
NET1
METTL25
CCDC59
DENR
CFAP20
STAT1
ZNF777
STYK1
OTOF
FAM166C
MRPS24
PPP5D1
CALM3
PRKAB2
CHD1L
NREP
TRIM29
GTPBP10
WBP1
INO80B
POLR1F
CCNH
RPS7
UBE2I
MVB12A
NMI
OR4N4
SNX17
EIF2B4
PON2
POLR2G
MSL2
TMEM126B
DLG2
MANBAL
ADPGK
MAST4
TMCC3
PGM2L1
LGALS8
EFNA1
TBC1D14
CEP120
PPIC
TUT1
MIGA1
NDUFB4
INTS12
GSTCD
METTL26
TENT5A
SREK1
MYL12A
PRCP
DDIAS
SELENOH
CTR9
TTC13
ARV1
IPMK
CISD1
FAM98B
ADSS2
ALDH18A1
KIF5B
STK38L
EIF3B
ZFAND3
SREK1IP1
CWC27
PTMA
ELF1
RPS3A
PTPN13
RPL6
PTPN11
SQSTM1
WBP4
MGAT4B
CEP63
ANAPC13
ARID1A
PARP4
SRCAP
LOC730183
PIGF
CRIPT
POLR1H
SNX1
CIAO2A
WASHC5
NSMCE2
RPL22L1
CD2BP2
PRKAR2A
DNAJC14
EMSY
CHD2
STRIP2
PLEKHA1
SMARCA5
GTF2IRD2
BAZ1B
GTF2IRD2B
SMC3
ARL14EP
FAM91A1
PCP2
ACYP2
STXBP2
SMIM12
AGBL3
RNF135
CALM2
ECT2
FGFR2
RABGAP1
POC1A
SMARCAL1
PLEKHF2
EFCAB2
CNBP
HSD17B12
SOWAHC
SEPTIN10
ETFA
TFPT
PRPF31
SRP9
NCOA5
RPS13
GSDMD
HILPDA
SHKBP1
CHCHD3
PTK2
JAG1
DOCK9
RAB10
CDK11B
CDK11A
POT1
SLC39A8
OXR1
STX18
NUP107
NUDT16
SERPINI1
PDCD10
C19orf48
SECISBP2
CEP135
SPTLC1
EHD4
FNDC3A
DYNLRB1
FRAT2
PTOV1
TMEM260
ATF7-NPFF
ATF7
MRPS18C
HELQ
ZNF644
DNAJC25-GNG10
DNAJC25
METTL2B
COG7
SLC30A6
DCBLD2
KIFAP3
CYP51A1
NUP54
WDR93
PEX11A
HES6
MATR3
RALA
BCL6
PRR25
ZNF25
COL9A3
DCAKD
NMT1
RBM12
CPNE1
ANAPC4
PRPF38A
ORC1
RNF32
NECTIN2
RPN2
MROH8
TTC30B
SPATA9
RHOBTB3
THAP10
LRRC49
CD55
MFSD14A
DCT
LIPG
MSANTD4
TTC26
MICU2
SCAF11
ITPKC
COQ8B
LDHB
SVIP
NEPRO
SLC35E2A
TRMT2A
RANBP1
LRRC58
RPL5
UBQLN4
LAMTOR2
FZD6
CCZ1B
FANCI
PPP1R13L
POLR1G
PDIA4
PPME1
C2CD3
DCP1B
SMYD3
NUB1
ZBTB37
C2orf49
DPH5
XRCC5
METTL9
GFM2
NUP42
CLDN9
PSMA1
JRKL
CCDC82
FBXO48
APLF
PDXDC1
UROS
BCCIP
CBWD5
CBWD3
CBWD6
CCNL1
GARS1
ZDHHC24
ACTN3
CDK13
THADA
ABCF1
SEC22A
CLCF1
MAL2
LYPLAL1
EREG
ATG101
TRIB1
TMEM222
ZNHIT2
MRPL49
FAU
SPACA9
AK8
WDR75
SZT2
MED8
AP2B1
GSPT1
TAF10
UBR7
GON7
COG6
GRWD1
C4orf36
PRPF4
PRKN
PACRG
NOP58
CDC26
FAM228B
H4C12
NUDCD1
PFN4
GSTO2
RTN4
PLD3
C19orf47
RNF103
IFRD1
GPR160
ABCF2-H2BE1
ABCF2
STX16
PSPH
CCT6A
PIGBOS1
PIGB
MED4
UFM1
APBB2
C6orf62
TMBIM4
MRPL40
HIRA
RNF6
VIRMA
RWDD1
SLC25A32
DCAF13
NUDCD3
GFM1
VAC14
ELL2
PPP1R10
MRPS18B
ARNTL
PCNX3
MAP3K11
RPS11
MMAA
EEF1AKMT1
ZBTB20
TRAK2
STRADB
HERC1
COPG1
IKBIP
APAF1
EIF2AK1
RAB3C
DIS3
ZNF584
INTS13
FGFR1OP2
SRSF3
KPNA1
FPGS
UCHL3
WDR11
FAM110A
XPO1
EIF4A2
RNF115
POLR3C
ZNRF2
SLC39A10
CEP126
ANGPTL5
DUSP10
EMC2
FAM76B
CEP57
IGF2BP3
WWOX
UQCRC2
CYTH2
THAP5
DNAJB9
AMN1
MARCHF9
CDK4
NDFIP2
TRA2B
ACTRT3
MYNN
MRPS23
TMEM41A
ARHGEF19
ZBTB11
PLEKHA8
FKBP14
SECISBP2L
EFHC1
UGDH
MET
DNTTIP2
TMEM126A
SRRT
UTP3
SAP18
HSPA5
TSG101
SRP14
LOC100287896
LIPT2
SPRED1
CDC25C
FAM53C
MTHFD2L
SRFBP1
NXF1
ZNF672
KCTD12
WDHD1
SOCS4
CCNG2
CENPN
LANCL2
PPM1D
TMEM242
RBBP6
RTTN
CROT
C8orf76
FDXACB1
C11orf1
KRIT1
ANKIB1
MOB4
MED30
LFNG
DESI2
RCHY1
SHOX2
RSRC1
UBB
PIGW
MYO19
TAGLN2
UBN2
ZC3H15
CDK8
TOMM7
NHLRC2
DCLRE1A
TTC8
STPG2
SPDL1
RBL1
ZNF335
EHF
ZNF764
COX18
ARNT
GSK3B
LINS1
ASB7
UGGT2
MRPL17
NUP205
LRRK1
JOSD2
ASPDH
NAT10
FAM3C
BORCS6
SLC25A28
MTMR6
UEVLD
PAXBP1
H3C3
H2BC3
SYS1
C15orf40
TBC1D23
ZHX2
PTRHD1
CENPO
PAK1IP1
C6orf52
DNAAF2
LACC1
CCDC122
SDCBP
HJURP
SYVN1
GGCT
SEC31A
TNPO1
WDR27
C6orf120
PPFIBP1
GMCL1
AFTPH
OPA1
RBM28
PLAG1
CHCHD7
FBXO22
ZNF264
CDKN2C
MAGOHB
ACAD9
CTSV
ZFYVE27
ZNF215
MPC2
DCAF6
STK35
H4C14
ABHD2
USP8
H4C15
TCF12
ING3
TP53INP2
ZSCAN31
ARPC1B
ZNF384
IL4I1
SYNRG
CCDC146
GADD45A
METTL18
C1orf112
C11orf65
TMEM258
FEN1
MRPL30
MITD1
AHCYL2
TRMO
FNDC3B
RPL24
ZNF627
SAMD12
CLDN3
TMBIM6
TOE1
MUTYH
TSC22D2
ANAPC10
ABCE1
ZNF438
SETDB2-PHF11
SETDB2
CAB39L
POLR3B
ALKBH3
PSMD3
HSPH1
HSCB
CHEK2
FGFBP3
NAGK
MRPL48
TRAF7
TC2N
PLK2
PRELID2
ST7L
SCYL2
DEPDC4
CAPZA1
ZNF3
RPS3
RPL37
CDIN1
BBS9
ESYT2
CRYBG1
POLR2H
WDR33
GORAB
COX5B
CLCN2
CRNKL1
CFAP61