ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867216 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◣ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

FRG2C
FAM102A
SMARCD2
PLEKHB1
MYH14
LMF1
ZNF217
DUX4
LAD1
WWOX
LRATD2
PDE6A
FAM227B
DTWD1
PPDPF
DGLUCY
CNP
ANP32B
PDE4DIP
KMT5B
KANK1
CLDN12
TRIM37
BACE1
SMIM35
CENPP
HBP1
VTCN1
MTF2
PAQR4
SHROOM1
NCOA3
TUBD1
RPS6KB1
STX16
OTOGL
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PI16
VPS37B
ARHGEF1
DPY19L4
MTSS2
ZNF3
PRAMEF18
IFT46
RUBCNL
GPSM3
PSMD6
FRG2
CYB5R2
COX19
RDH12
B3GALT2
HLF
PLCE1
EPYC
LRRC74A
ZKSCAN1
CDYL
PRICKLE2
C2CD4D
DHX36
CADM1
HACD3
MBNL1
PTPRA
H3C6
PXMP2
POLE
BMP7
MICAL2
SLC25A10
NIPAL4
ZNF24
CDK2AP1
PAPSS1
SLC33A1
PPP2R2B
BCL9L
TMEM100
PPP6R1
MRPS18A
COPS6
NCALD
SLC35B2
HR
PLEKHG4
EIF2D
UXS1
DUSP6
NFE2
ATP1B1
PARD6B
HOXA3
FMO1
MTMR7
SPATA13
DYNC1H1
RTKN
SEC14L5
RPUSD3
POLR3E
TRAF4
ZCCHC4
RPH3A
DCLRE1B
AP4B1
HDAC11
PRR7
HMGB1
USPL1
MPP7
KANSL3
FER1L5
MAP4K5
ATL1
KRT23
FAM222B
FGD5
LSMEM1
SH3YL1
ACP1
PFDN4
C18orf21
EML4
SEC14L2
ZNF180
IL16
KIN
ATP5F1C
COL2A1
RPS3
NOXO1
GFER
USP32
SNORC
COL9A2
CTHRC1
OC90
MYADM
TSKU
PRDX1
E2F6
GBA
TMEM258
FEN1
PRORP
PPP2R3C
SYT1
GAS7
GAL3ST4
TBRG4
PALB2
DCTN5
EHF
USP8
RIPOR3
MAPK1IP1L
CNPY2
EMSY
ADGRL1
PMP2
CNIH1
NREP
NOL4L
PRKAB2
CHD1L
GABPB1
SPIRE1
FAM78B
ADAM22
COL9A1
RAB8B
LMCD1
SCAF8
N4BP3
PLA2G7
EIF1AD
BANF1
STARD13
SNX30
OTUD7B
MMP17
CLTC
KRT15
RHOC
ATP6V1G3
HEXIM2
HEATR5A
LRRC37A3
MARVELD1
THEM4
OTUD6B
RTL9
DNAJC14
BRIP1
MINAR1
ZNHIT1
PLOD3
HIPK1
SLC25A24
ARF6
FRAT1
CNNM2
TRIM50
FKBP6
UBXN2A
TMEM170A
CYP19A1
CABP7
RNFT1
TMCC2
EFNA4
MRPS23
SRGAP1
CRCP
PDE8A
PLD4
BCAS4
INO80C
ZNF787
RGMA
GDE1
CCP110
GRK5
TEX50
TPM4
FAM71D
SRGAP2B
DCSTAMP
SMIM6
DSTYK
EIF3E
AP4E1
TSTD2
NCBP1
AXIN2
HSPA2
TMBIM4
YLPM1
NUP107
HES1
INTS12
GSTCD
RGR
LRIT1
ITPK1
APP
ZNF609
HAO1
ARHGAP19
ABTB2
TADA1
GLIPR1L1
CAPS2
CCDC130
RTBDN
MAST1
LRP12
STEAP2
STRADA
CCDC200
BTBD3
ZHX3
CUEDC1
PPM1D
LMNA
MEX3A
PDXDC1
ATP11A
LRRC75B
GGT1
S100A13
SOX6
S100A1
GAPDH
WDR74
SMC4
IFT80
ARHGAP18
C11orf91
ZNF775
GYG2
ARID2
COX16
ATP6V0A2
FBXO32
POR
PEX3
ADAT2
TSPAN14
SULF1
VAX1
PERP
SART1
FGA
ARHGAP39
TBC1D30
MYBL2
SYT7
EFCAB2
CORO2B
RAC1
MAFF
CFDP1
VMP1
PTRH2
MCM7
AP4M1
CALN1
DAAM1
TNRC18
MIDEAS
PRSS54
SLC16A1
NEMF
SPTBN1
KMT2A
C5orf15
ABHD11
DNAAF3
CSDE1
SCCPDH
TINAGL1
OPA1
SORT1
HSD17B7
CYTH1
UGT8
NWD1
SLC11A2
RPL27
KLHL32
RAB17
PRELID3A
CSKMT
C11orf98
PPME1
C2CD3
TMEM177
CLRN1
FGD4
SPP1
PLPP2
ANKRD39
SPRING1
RNFT2
PIK3R1
CAPS
SRSF7
RPL26L1
CEP85L
MRPS31
SVOPL
CXCR4
APPBP2
FAM222A
ERO1A
NKX2-8
NEDD4
PCDH9
MEF2C
AMOTL1
USP3
METTL9
ELF1
SMIM5
GPR158
MAN2A2
ACOT2
INPP4B
ENPP2
MKRN2OS
MKRN2
POC1B-GALNT4
POC1B
GALNT4
HMG20B
SMARCD1
PDZRN3
TRIM73
HDGFL1
FGFR4
DHRS11
RSAD1
SF3B2
GAL3ST3
SLA2
ZSCAN32
ZNF174
BTNL9
RPL32
CRBN
VEPH1
FLI1
DOCK8
LYRM1
DCUN1D3
ZNF296
GEMIN7
PKM
NRAS
LAMA4
FAM114A1
ERN1
PCDH1
GFM2
MYO5C
DGKA
FAM104A
C17orf80
PTP4A1
TMEM41A
ADRM1
FUT10
RHCE
FZD1
B4GALT7
SRF
NPIPB9
FRMD8
PRPF18
CTBP2
GIP
SLC39A13
MED12L
DICER1
NPAS4
LOC100129484
DECR1
ZBTB48
SORBS2
PLEC
SLC39A6
ELP2
PCMTD1
MAD2L1BP
GTPBP2
BMX
GFRA1
TRIM2
APOD
DNAI2
SQLE
NDUFAF6
RMND5B
KDSR
PRKCD
TMPRSS7
USP15
DRAP1
C11orf68
PACSIN2
DDR1
GNAS
CD244
BCAS3
AMZ2
SPDYE14
SPDYE10P
CASTOR2
CAMSAP2
IFNAR2
FGD3
KIF21A
TRIM74
ELAPOR2
MBP
DRG2
SGCE
PEG10
MRGPRX4
USP30
AFAP1L1
DTX3
ARHGEF25
STX18
MRPL21
IGHMBP2
INCENP
CA8
PTGR2
SLC2A12
TRIB1
UCHL5
RO60
STRBP
MAST4
CTNNB1
OSGIN2
CPEB1
SEMA3D
RBBP5
H2BC12
H2AC12
NSFL1C
CHD6
CHAC2
CGRRF1
FAHD2A
GPR75-ASB3
GPR75
MAP3K13
SERPINA3
RAPGEF4
PSMC6
KIF22
GPRC5D
ZNRF3
RAB4B
MIA
MRPL44
NOL11
KRT8
TACO1
NUDT2
PSMA7
VCPKMT
ATP6V0E1
C1orf127
PKMYT1
COL23A1
USP17L20
USP17L22
SLC44A1
PPFIBP2
CDH26
HAPLN2
BMP8B
GNB2
TES
WDR11
INSC
POGZ
DCPS
MRPL42
ZNF488
CIDEC
C3orf70
CNOT6
LEPROT
LEPR
ACOT4
PIK3C2B
TRIM33
CDH3
CPPED1
FAM214A
TMC8
TMC6
RAB11B
RNF19A
NELFCD
CLUAP1
HAPLN1
PYGL
PLOD2
TBXAS1
HIPK2
UCMA
STYXL1
MDH2
CSTF1
AURKA
RPL30
SLC25A25
NAIF1
FDFT1
PLEKHF2
ANK3
SPATA2
SDK1
BCAP29
ATP10B
MNX1
PHACTR3
PLAC8
TPT1
EPB41L2
MAT2A
AQP6
DDX3X
IL25
CMTM5
CDK12
ITGB3BP
EFCAB7
ADNP
MBNL2
RP9
SAR1A
MAP2
RBBP8NL
AURKAIP1
SRRT
CCDC88A
IQSEC3
ARL14EP
CALCR
SRI
LEO1
NAA35
TUBG1
RETREG3
PPP2R3B
AGR2
ZNF697
LOC100421372
HSPA14
CDNF
LYPD5
CA2
RAB5B
PHAX
APC
GMFB
HTRA2
DQX1
CLDN9
AMFR
GRAMD1A
RABGEF1
NBEAL2
CCDC12
EFNA1
CEP120
HACL1
BTD
ANKRD36C
IMMP2L
RIPK2
THOP1
SGTA
B4GALNT1
TRAF1
ELF5
CDK5RAP3
TSC1
GFI1B
DMXL2
SLC6A9
AMOT
ARL6IP1
KDM3A
RHOT2
ESRP1
CALD1
UBE3C
RGS9
VGLL4
ABCA10
UBE2I
LIMCH1
HSPH1
SLC35E3
EXOC5
AP5M1
TBC1D31
ZSCAN12
FAM177A1
EEF1A1
KLHL21
RBM39
RNF103
TBC1D5
LOC100509620
SLC6A14
FUT8
THOC3
ETNK1
MRPL40
HIRA
PEMT
RCBTB2
S1PR2
ERGIC1
ZFAND6
RAB9A
TMEM94
SUPT7L
SLC4A1AP
ZNF280D
SMG1
NT5C3A
FBXO34
TENT5D
CRKL
GBP1
LGSN
SASH1
NCSTN
COPA
GGCX
NOCT
UBC
MAN1A2
TUBGCP3
TUT7
FAT1
CPLX2
TMEM150A
SLC13A2
PEX16
LARGE2
CPM
FAM86B1
MRGPRX3
SLC25A21
BACH1
CBX1
STX6
CHST15
PLPPR1
ITGA6
TMEM242
ARHGAP27
RINT1
PSMG3
HDDC2
NAT8
MAX
DMTF1
IREB2
IPO4
SYTL2
MFSD2B
ZNF48
PCBD2
TRIM9
RIN3
VIRMA
BRWD1
MAML2
TECTB
ZFHX3
PRRT1B
CLIP2
HUS1
SHC4
ATAD2
TSEN54
CASKIN2
MOCOS
RAB33B
SLC25A40
DBF4
RUFY1
FAM160A2
CNGA4
CARM1
SCG3
NPTXR
RHPN1
MAN2C1
CCNC
PPP1R3D
FAM217B
MRRF
ASB14
ABCC5
LTBP1
ARSI
PRTFDC1
KIAA2013
SCRG1
EIF2AK3
NBN
CCT2
PROSER1
NHLRC3
CCDC57
SLC27A2
MED23
DDX41
TMEM60
PHTF2
TDP2
ACOT13
PRUNE1
MINDY1
DCBLD1
KIF14
ISOC1
PWP2
LOC102724159
RNF103-CHMP3
RMND5A
CYP51A1
PGC
CDIN1
FUT1
FGF21
GOLGA5
ORC2
NOXA1
TMEM44
DDX42
CCDC47
UNKL
ETV4
KLF10
KDF1
AMN1
SNAPC3
LCP1
PYDC5
IFI16
SEPTIN9
FYN
PA2G4
RAB30
PTPDC1
FAM120B
ABCA5
TEX14
RAD51C
INTS10
TPD52L1
DLL1
DHRS7
SSBP1
ZC3H6
AKR1E2
FKBP9
SRRM3
METTL26
U2SURP
RABGGTA
GRAMD2B
SRGAP2C
TAOK2
RHOJ
FCER1G
MYO5A
P2RY14
ARHGEF37
ARHGEF19
TPK1
GPC3
FIBIN
C11orf97
CFAP410
TSPAN13
CERS5
WWP2
CNFN
RPS7
TIMM23
SLC39A11
SP6
ZNF706
ERBB3
MGAM2
MEN1
DCUN1D1
AADAT
SLC9A4
TEFM
INKA2
AKAP9
MAP3K3
DDX20
ATXN2L
PRKAB1
FAM136A
INPPL1
TNS2
STK32C
LRRC27
ARID1A
SIKE1
VASH1
CYP21A2
TARS2
SLC25A32
DCAF13
POFUT1
PLAGL2
NHP2
DHRS13
RBM4B
TIMP4
RTF2
DPH7
LUC7L3
BTN3A1
CABLES1
UGT2B28
CA6
CELF2
PNPLA8
CD58
TMEM68
TGS1
RELT
PTK6
SIDT2
LCK
FAM167B
GABRP
ARHGEF28
ARHGEF38
SPRYD3
RPS29
ZNF277
DOCK4
GSK3A
MRPS14
LRR1
EIF4B
MED9
DCAF8
VGF
WDR24
TNIP2
MTAP
NDUFS7
NUFIP2
SEL1L
TJP3
E4F1
THAP12
GVQW3
UGDH
XPC
LSM3
SPPL2A
GALC
ADGRF1
RBM23
ANKRD40
CCNJ
ZNF56
KLHDC9
ANTXRL
PGK2
CIC
KBTBD7
TBC1D12
ST3GAL4
GFPT1
KRTAP9-9
KRTAP9-8
KRTAP9-3
TENT5C
JOSD2
ASPDH
MAPK6
RRM2B
ADCK5
GAS8
DBNDD1
SMPD3
C10orf120
STAU2
PRRC2B
LSG1
CAPRIN2
DPP3
NUP155
PCBP2
OMD
GMPS
SAPCD2
FAM228B
SF3B6
CLDN4
ANKRD27
NFE2L1
EIF4H
CSRNP2
RFC2
BCAS2
SNX31
ACSS3
PKD1
MBL2
POLA1
IFT88
IVD
FAM207A
PPP2R5E
SLC25A13
TMEM163
INHA
PLXNB3
FARP1
CLPB
ARFGEF2
CBLL1
PUF60
RMDN1
GPT2
CALM1
CCDC117
TMIGD3
OSBPL2
SLC24A1