ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867217 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◣ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

FRG2C
ZNF217
PLEKHB1
PDE6A
SMARCD2
FAM102A
DGLUCY
MYH14
LRATD2
LMF1
FAM227B
DTWD1
CNP
DUX4
CLDN12
WWOX
PPDPF
KANK1
PFDN4
OTOGL
PAQR4
ANP32B
VTCN1
PDE4DIP
SLC35B2
MTF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SMIM35
MTSS2
RUBCNL
UXS1
ARHGEF1
DUSP6
LAD1
VPS37B
RDH12
TRIM37
TUBD1
RPS6KB1
HLF
SHROOM1
PSMD6
B3GALT2
POR
MBNL1
PRR7
STX16
TMBIM4
KMT5B
PARD6B
PPP2R2B
ZKSCAN1
PRICKLE2
RTKN
PLCE1
CDK2AP1
HBP1
RPS3
CENPP
ZNF3
TMEM258
FEN1
TSKU
FGD5
CALN1
ARHGAP39
BTBD3
C2CD4D
PXMP2
POLE
BACE1
HACD3
PRORP
PPP2R3C
GPSM3
LMCD1
FMO1
BMP7
SPATA13
NCOA3
HR
MAP4K5
ATL1
IFT46
MTMR7
DHX36
NFE2
SLC25A24
DCLRE1B
AP4B1
TBRG4
NREP
ZCCHC4
ZHX3
FAM222B
NIPAL4
SNX30
EMSY
SYT1
FAM71D
CNNM2
COX19
KRT15
COL9A1
TEX50
FGD3
LAMA4
SPIRE1
CNIH1
ABCA5
PTPRA
N4BP3
DRAP1
C11orf68
STX18
RPUSD3
CDYL
CTHRC1
BTNL9
BCL9L
PPP6R1
DPY19L4
CCDC130
CYB5R2
HEATR5A
TRAF4
ZNF180
FRG2
PAPSS1
TMEM94
CNPY2
CDH26
MYADM
ARHGAP27
AQP6
SART1
TRIM2
HEXIM2
GAL3ST4
IL16
SLC25A10
LMNA
MEX3A
USP32
NCALD
SEC14L5
KANSL3
FER1L5
RIPOR3
PDXDC1
COPS6
SMIM5
ZNF609
NOCT
GLIPR1L1
CAPS2
ACOT2
CIPC
RHOC
ABHD11
AP4E1
MEF2C
DLST
CSDE1
CADM1
PLEKHG4
KMT2A
ZNF24
E2F6
INSC
RNFT1
HMGB1
USPL1
RMND5B
VMP1
PTRH2
DHRS11
LCP1
SLC33A1
CRYM
DGKA
ATP1B1
PCDH9
EIF2D
EPYC
CSKMT
C11orf98
WWP1
MPP7
HMG20B
TMEM100
RPH3A
MMP17
TBC1D30
SULF1
CA8
NWD1
PPFIBP2
TRIM50
FKBP6
PCDH1
KIN
ATP5F1C
ATP6V1G3
SVOPL
LSMEM1
KRT23
SSBP1
MAST4
GAS7
RAB8B
TNRC18
MYO5C
NRAS
PRKCD
SLC35E2A
TRIM33
EFNA4
PLA2G7
UBXN2A
SLC6A9
EML4
PMP2
SGCE
PEG10
WDR31
PI16
HDAC11
BSPRY
COL2A1
USP15
TMCC2
TMEM177
NOXO1
GFER
SYT7
TMEM170A
LRRC74A
PPP1R3D
FAM217B
SCCPDH
LRRC75B
GGT1
SMC4
IFT80
S1PR2
KDM3A
CFDP1
SLC11A2
NOL4L
TMEM129
TACC3
CCDC200
CNOT6
SCAF8
DCSTAMP
GYG2
ABTB2
HOXA3
EHF
SOX6
PERP
PTP4A1
FGA
DGAT1
MINAR1
ZBTB48
SORT1
RPL26L1
SNX31
ETV4
H3C6
MED23
THEM4
SEC14L2
C18orf21
WDR53
FBXO45
GTF2H4
ASB14
LCE2A
OTUD7B
NME1
FRMD8
PRDX1
PLD4
AGR2
INTS12
GSTCD
RBBP5
ARL6IP1
ASPM
STARD13
PDE4D
MICAL2
SUOX
WDR74
COL9A2
KLHL32
HSD17B7
OTOA
SRGAP2B
RPL32
SLC44A1
CFAP20
PRAMEF18
CPM
KDSR
FGFR4
YLPM1
DSC2
SLC35E3
B4GALNT1
INPP4B
ABCC5
UPF3A
OGA
MKRN2OS
MKRN2
ZNF787
ARF6
CHST11
PPIB
FBXO32
DDR1
ERO1A
AFAP1L1
MRPL21
IGHMBP2
VIRMA
RGMA
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RSAD1
HSPA2
MIDEAS
HDDC2
ST3GAL4
SELENOW
DCPS
POC1B-GALNT4
POC1B
GALNT4
GRK5
LOC100505841
RPS7
RNF103
LEPROT
LEPR
PIK3R1
SRGAP1
ANK3
SMIM6
SPP1
FAM78B
RNF19A
CYTH1
PRUNE1
MINDY1
ITGB4
NELFCD
ACSS3
ZNF277
DOCK4
CTNNB1
NEMF
GBA
TPK1
SNORC
DAAM1
MFSD2B
FRAT1
USP3
STRADA
SPATA2
EEF1A1
PRKAR2B
USP8
HACL1
BTD
RAB4A
RPL27
PLEC
NEDD4
FAM104A
C17orf80
UGT8
CABP7
PPME1
C2CD3
TACO1
CDH3
GKN1
MMP16
PAM16
ARID2
MRPS18A
MRRF
OC90
AXIN2
MYL12A
VGLL4
CGRRF1
TEX14
RAD51C
TBXAS1
HIPK2
PREX1
RABGEF1
MRPL40
HIRA
TSTD2
NCBP1
HNRNPH1
NT5C3A
SLIRP
ALKBH1
TRIM73
BARHL1
SORBS3
DMXL2
FAT1
SRGAP2C
MYL12B
HIPK1
CTDSP2
DNAJC14
BRIP1
RPL30
ATXN7
DSTYK
NCSTN
COPA
GABPB1
DECR1
CYP24A1
GPRC5D
SLC16A1
CORO2B
TRAF1
BCAS4
NEK1
BCAS3
AURKAIP1
KLF10
MARVELD1
LTBP1
SH3YL1
ACP1
POGZ
PRKAB2
CHD1L
GPR75-ASB3
GPR75
TENT5D
BACH1
SLAIN1
TRIM16L
ADAT1
DNAAF3
AKR1E2
LIMCH1
ABCB4
MAD2L1BP
GTPBP2
S100A13
EFCAB2
RAB17
S100A1
MAPK6
NKX2-8
CD244
BTN3A1
PRKCI
PPM1D
GPC3
LCK
FAM167B
PRKDC
MCM4
RAB33B
COMMD2
SPDYE14
SPDYE10P
CASTOR2
IFNAR2
POLR2J3
CALU
ARL8B
TPT1
TRIM74
DYNC2I1
SRF
KIF21A
C11orf91
CIDEC
CPLX2
IDI2
DKC1
MGRN1
EFNA1
PEMT
MMACHC
MAP2
AMOT
RHOJ
ATP2B1
TBC1D31
DRG2
ATP5MC2
TSPAN14
CLUAP1
RNF144A
OPA1
EIF3E
HAO1
GNAS
NACA
NPIPB9
THAP12
GVQW3
ZNF444
ZNF775
MRPS31
NUDT2
BPTF
FAM207A
NPC1
PELI1
SRSF7
MED9
C10orf67
LTBP2
SPAG1
SMG8
TIAL1
SLC39A6
ELP2
SRRT
CEP85L
BFAR
RNASEH2A
PRDX2
WDR11
TADA1
ZC3H3
MAFF
AMOTL1
HK2
MYBL2
FYN
RTL9
TECTB
PRTFDC1
CLTC
ATP10B
ARHGAP19
FZD1
LRRC37A3
ZNF488
STAP1
SPTBN1
CDIPT
METTL15
KIF18A
VCPKMT
OTUD6B
NANOS2
SPRYD3
GSTA4
PFKFB4
ZFHX3
PARP1
MAP7D3
HUS1
HERPUD2
RMDN1
LOC100129484
C5orf15
TEN1
ACOX1
GNB2
ELF1
SPATA9
RHOBTB3
WIZ
PEX3
ADAT2
KRT8
BRWD1
NHP2
CYP19A1
RBM4B
NSFL1C
POLR3E
NDUFAB1
EIF2S1
ATP6V1D
TPM4
SLC6A14
NBEAL2
CCDC12
MRPL44
RHOT2
UBE3C
TBC1D12
DCUN1D1
DENND2C
NOL11
RBBP8NL
MLEC
CCDC146
CDK5RAP3
OAZ3
ITPK1
ETNK1
EIF1AD
BANF1
COBLL1
COPS4
CLDN4
KLHL21
POMT2
GSTZ1
CYB561
GTF2H2
RHPN1
GNS
RASAL2
MRGPRX3
SLC35B1
MRGPRX4
IL25
CMTM5
CBX1
CARM1
MAT2A
BBS1
MAZ
SMARCD1
LOC100421372
HSPA14
CDNF
SLC24A1
ZNHIT1
PLOD3
CNFN
MAPK1IP1L
MBNL2
GMFB
THOP1
SGTA
R3HCC1
SEPTIN9
MTCH1
ZBTB3
POLR2H
ITGB1
RTBDN
MAST1
ZC3H15
HDGFL1
FAM114A1
VEZT
FGD6
FIBIN
PDLIM7
LEO1
SRFBP1
TJP3
CPPED1
TRPM8
TINAGL1
PTDSS1
MTERF3
RBM39
ANKRD39
SIRT2
NFKBIB
DDAH1
KCTD5
GPR158
RMND1
ARMT1
BCAS2
RNF24
CCN1
TEX53
CHD6
SPRING1
RNFT2
PAFAH1B2
FAM222A
MRPS23
GAS2L3
FLYWCH1
RGR
LRIT1
ZNF56
CYP26B1
BMX
SERPINA3
AMFR
TMEM163
DUSP14
KRT72
TOMM20L
RAB4B
MIA
ZNF572
GTPBP10
MALSU1
OSGIN2
FBXW7
GRHL2
PLP1
PPP5D1
CALM3
PACSIN2
UGP2
INKA2
DDX20
LTA4H
APP
SORBS2
RBBP6
DCP1A
PHLDA1
ABCA10
TPD52L1
FCER1G
TBX2
ADGRL1
EXD2
ATXN7L2
SCRIB
IMMP2L
RIPK2
NDUFV1
MAML2
NAT8
GDF10
GLIPR1L2
RNF103-CHMP3
RMND5A
PSMA7
DDX41
PLEKHF2
DCAF10
NAA35
WDR87
SIPA1L3
ERICH6
YIPF2
TIMM29
CHAMP1
KIAA2013
LYSMD2
ACTR10
FKBP5
CDK13
RRM2B
APC
PRSS54
CPEB1
MOCOS
PRSS8
FAHD2B
SLX1B
SLX1A
BOLA2B
BOLA2
ATAD2
BOLA2-SMG1P6
RBM48
PEX1
ZC3H6
PIK3C2B
SULT1A4
SULT1A3
C1orf127
PREP
CALD1
VGF
OR2A1
RAF1
ATP5F1E
TMEM60
PHTF2
CRCP
SND1
SQLE
ARPP19
LRP12
APOD
GDPD1
SLC27A2
RPL7L1
ACLY
ZFAND3
ADCK5
UBFD1
EARS2
EEPD1
SEMA3D
TMUB2
EXTL1
KRT6B
TRAPPC6B
PNN
METTL9
EEA1
EEF2K
HAPLN1
VASH1
BMI1
PAMR1
BAMBI
ARID1A
TARS2
COX16
DHRS13
SNAPC3
PCBP2
RAPGEF4
KRTAP9-9
KRTAP9-8
KRTAP9-3
GNB5
TMC2
SNCAIP
CROT
VWA1
GOLGA5
SLC34A2
CENPN
CTDP1
ATP6V0E1
KIF14
HPS6
HEBP2
YOD1
PFKFB2
HS6ST1
LRRC10B
NPAS4
NDUFAF6
ARHGAP18
WIPI1
ELAPOR2
ATP6V0C
METTL25
CCDC59
FAM228B
STYXL1
MDH2
CLIP2
SF3B6
INCENP
ANKRD36
PPP2R3B
KDM5B
VEPH1
FLI1
UCMA
MAX
C20orf27
TRIM51
ATN1
FSTL4
NUP107
RPS29
MRPS18C
HELQ
SAP30BP
RECQL5
TSPAN17
CAMSAP2
ZNF410
ATXN2L
SLC37A4
INSYN2B
UIMC1
DPP9
NBN
EEF1AKNMT
ZNF764
MEMO1
ZNRF3
NFATC2
FBXO34
ZNF267
PKD1
PSAP
ASAP2
ZMYM5
SUPT4H1
TBC1D19
SF3B2
GAL3ST3
POP7
ZCCHC8
UNC50
COA5
AZIN1
CHST15
OMD
KRT3
LZTS2
CDHR3
TMEM102
FGF11
B4GALT7
SNX17
EIF2B4
ARHGEF19
RAB30
MKLN1
AMZ2
MUS81
CFL1
DNAH2
EPB41L2
CALCR
TMEM150A
TMEM144
C8B
MBTPS1
RCN1
LIX1
XRRA1
SPCS2
WWP2
USP30
GOLM2
EHD1
PCMTD1
CPT1A
YTHDC1
RBM25
CXCR4
CCDC134
PTGR2
FLT1
LSG1
CYP51A1
KPNB1
ESRP1
SMAD5
GTPBP3
ANO8
KRI1
CDKN2D
CNDP2
WDR24
SPPL2A
ADAMTS9
ZG16B
IQCH
AAGAB
RRAGC
MCMBP
UBB
SRSF1
DDX59
C10orf120
TOP1
PRELID3B
ITGA6
UBC
DENR
SLC39A13
ARFGEF2
TEDC1
CRIP1
AMN1
RABGAP1L
TBC1D5
DUSP23
LDOC1
RSPO4
ELL
TMEM108
SLC25A3
ATG16L2
PRRC2B
INO80C
SLC26A8
MAPK14
POLD1
SAR1A
KIAA0232