ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX718108 | hESC derived pancreatic cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◣ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MAMDC2
MTRNR2L2
MSH3
DHFR
COL23A1
MTRNR2L8
RGPD2
RGPD1
MUC3A
MTRNR2L9
FRG2C
MTRNR2L1
FRG2
TRIM48
DUX4
LGR6
CEP295NL
ZNF195
USP17L20
USP17L22
MDM4
UCKL1
RANBP17
CCDC200
RAP1A
OPRL1
LKAAEAR1
LINGO1
GPAT4
USP17L18
USP17L11
USP17L10
USP17L7
USP17L2
OSGIN1
WDR74
VCX3B
GABRB3
EPN1
SPATC1L
GALR1
TEX19
MUC2
GAGE2B
FCMR
RPH3AL
SLC35E2B
BCL9L
TINAGL1
SLC35E2A
SNX16
POR
C2CD4D
SNAP29
PI4KA
TAF15
GPSM3
POLG
ARRDC4
PARK7
NOXO1
GFER
SH3KBP1
IQCH
AAGAB
PDXDC1
PRKCI
PPDPF
KLK6
PPIB
CDC25C
PGBD4
EMC7
FAM53C
NOP56
OGA
RNASEH2A
PRDX2
CDYL
GIT2
ANKRD13A
DOLPP1
ZBTB32
LRRC75B
GGT1
PHRF1
EIF3B
MTF2
PFDN4
CNOT6
RHBDD3
EWSR1
PTDSS1
MTERF3
PIK3R3
PMF1-BGLAP
PMF1
FRAT2
KHSRP
AKIRIN1
LSR
EED
ATG101
RNF13
PCDH1
SLC35A5
ATG3
DNAJB1
DLST
MYO9B
HAUS8
GNB2
ATG16L2
WDR97
MAF1
PRR19
PAFAH1B3
MRPS24
NOTCH1
YY1AP1
DAP3
IQCE
NDST2
COMMD6
ETV2
COX6B1
KCNH8
LAMB3
PTOV1
ZNF775
HMGCS1
CDCA7L
BCL6
USP15
RAB4B
MIA
UCHL3
SLBP
ACSS1
CENPN
UIMC1
FOS
PMVK
TSPAN4
POLR2L
BZW2
ANKMY2
WASL
UBE2C
PLEKHB1
UROS
BCCIP
FUS
DNMT1
CDON
FLCN
TMEM63A
TMEM160
DBP
PAXIP1
UNKL
STK35
ETNK1
FAM72C
PRKDC
MCM4
FRAT1
MBLAC1
STIP1
ZNF219
TMEM253
DNAAF3
KAT7
SETD5
RASSF7
LMNTD2
C21orf91
RBM7
C11orf71
PITPNM1
NOL8
CENPP
UBE2B
CDKL3
LIN54
SELENOW
RPL35
ARPC5L
PSIP1
PDE8A
PROSER3
HSPB6
FAM72A
SHKBP1
HMX3
FAM72B
MRPS11
MRPL46
SPTBN1
TIGD5
EEF1D
MYL12B
CIC
XRRA1
SPCS2
IL17RB
CHDH
FRMD5
PIP4K2B
ZNF335
HBB
MYH14
ARAF
FOSL1
COX19
UFSP2
C4orf47
DGAT2
SLC5A1
TTC9B
MAGIX
CCNP
MTBP
MRPL13
PLEKHG4
PRDM10
MYL12A
TARDBP
HHIPL1
CCDC85C
C6orf226
ZNF8
HNRNPL
METTL25
CCDC59
RNASEK
C17orf49
UBA1
PPP5D1
CALM3
IRF2BP2
SYVN1
TTLL7
ARNTL
CCNL2
FAM83D
ARHGEF1
FANCI
CDIPT
TOP2A
PSMD14
TRAPPC6B
PNN
WWP2
OXR1
ATP6V0C
ZFAND3
ZNHIT1
PLOD3
RPL22
HDAC2
TP53BP2
RPN2
MROH8
RRBP1
ITGA6
PRCP
DDIAS
PPP1R13L
POLR1G
UQCRQ
GDF9
PRR3
GNL1
ADAP1
DPP9
WRAP53
TP53
CCDC9B
LUC7L2
TEPSIN
NDUFAF8
STX16
SLC25A42
TBC1D17
AKT1S1
TANGO2
ARVCF
MSANTD4
SS18
RNF103-CHMP3
RMND5A
BRICD5
FAM72D
ABHD11
DISP3
CNOT1
TMEM45A
UQCRC2
ANKRD12
PSPN
ALKBH7
TNS2
SLA2
TNRC18
NOCT
CENPE
RPL19
CACNB1
WASHC5
NSMCE2
TCP11L2
RMND5B
CNOT3
HDAC1
THOC1
CYP2R1
CFDP1
RRM2
NUCB2
MRPS31
USP3
ACAP2
NFYC
ABTB2
PGP
DOHH
SRI
ZMYM2
SP2
UBE2A
NDUFB1
CPSF2
C6orf62
TSKS
AP2A1
NR6A1
STK32C
LRRC27
NCDN
KIAA0319L
SPAAR
TMPRSS3
MYT1
NWD1
LANCL2
MAT2A
PTP4A2
ANP32A
TMEM260
TUBB4B
CNFN
RBM39
ATP8A1
GTF2IRD2
HNRNPA1
CBX5
ZNF609
MACC1
PRKACA
UFD1
FMC1-LUC7L2
FMC1
CDC45
SSBP1
SOD2
ZNF519
SMC3
SHF
HMGB1
PIF1
MIA3
LEMD2
C2orf42
PPP6R1
ATP5PD
SLX1B
SLX1A
BOLA2B
BOLA2
USPL1
SSNA1
FGFR4
ANAPC2
STXBP3
MIA2
ANKRD39
FMN1
ZNF300
TRAF2
OGDH
ZFAND4
ATP5MC1
OTUB2
ATAD2
PELATON
TLE3
GTF2IRD2B
SERTAD1
SELENOH
ZMYM5
HNRNPUL1
HECTD2
PRKAG2
BAZ1B
RASEF
TTYH3
SKA2
PRR11
CD164
KIF1B
ATF7-NPFF
ATF7
PCLAF
UTP23
CSNK2A1
ZNF572
TMEM168
VBP1
TSKU
RBM42
LEPROT
LEPR
KIAA0895
GGNBP2
RAB33B
AK2
LRCH4
FBXO24
ECPAS
CABP7
PELI1
OSBPL2
ATP5F1B
SMARCD2
FAM227A
CBY1
CCT5
ATPSCKMT
FBXO5
PANK2
MADD
SPATA20
FAM227B
DTWD1
RABGEF1
UTP18
MBTD1
ARHGEF38
NCMAP
ISOC2
E2F6
FARSA
CALR
KCNAB2
MGRN1
BOLA2-SMG1P6
SMARCAL1
KATNB1
TRIP4
ZNF687
NUF2
INAVA
CYP2W1
RTKN
OPA3
EIF2D
ASH1L
GIPC1
FAM110A
CSPP1
COPS5
HDGFL2
PNKP
CDK16
ZCCHC4
NLK
COQ8A
KCTD7
PAIP2B
NRARP
TMEM218
H3C15
H3C14
H2AC19
H2AC18
EFR3A
ZNF574
TES
RNF6
ANKHD1-EIF4EBP3
ANKHD1
LRPPRC
KMT5C
H3C6
MRPL21
IGHMBP2
PTMA
EFNB2
PLPP2
HYAL2
MOCS3
DPM1
SREK1IP1
PDK2
CWC27
H2AZ2
PLAG1
CHCHD7
MRPL45
LRATD2
NOTCH2NLC
WDR62
THAP8
CKAP5
PTCD3
POLR1A
NOTCH2NLB
NOTCH2NLA
TFPT
PRPF31
OSBP
ARHGAP19
HOMEZ
POLR2J3
GGCT
CBWD5
PPFIA3
LIN7B
C19orf73
ALDH4A1
PRRC2B
ATG9B
ABCB8
ITGB3BP
EFCAB7
NECTIN3
H4C14
TTF1
TMTC4
CFAP77
EIF2AK3
SF3A3
COA1
FSIP1
TTBK2
PRR25
KANSL3
FER1L5
LRRC61
ACTR3C
ECHDC2
MTCH1
SRXN1
IVD
KANSL1
DOT1L
ADPGK
TADA3
ARPC4-TTLL3
ARPC4
KLF5
MPHOSPH8
CANX
STX18
NUP107
FAM228B
WDR45
CBWD3
SPTBN4
RAB28
MEIS1
UNG
TPBG
HBP1
ATP5IF1
ALKBH2
NBEAL2
LSG1
KRT15
HNRNPC
ANLN
PRMT1
DIAPH1
CWC25
TMEM209
SSMEM1
RAB7A
C7orf57
CENPA
RLN2
PLEKHG5
CALU
NDUFS3
KBTBD4
EIF3F
DNAJC14
KLF6
SEPTIN9
TMEM242
PTCD2
MRPS27
DIAPH3
CDK5RAP2
RB1
XPA
MAMDC4
YJU2
PPWD1
MZT1
KANSL2
IFT52
FANCF
ETV4
CENPK
BORA
MTMR14
GTF2H2
ABHD2
LIPE
ZNF484
HRC
RBM27
ZSWIM1
AAR2
SLC24A1
CNPY3
PRR14
SUPT20H
VPS37B
CCDC12
USP31
FCHSD2
CHCHD6
PAK4
TRIM29
PRDX1
SPRYD3
FRMD6
GNG3
GATAD2B
FBXO33
BSCL2
ZSCAN22
C1orf198
PKNOX1
COPS7B
TYK2
NPL
RAVER1
RBM28
PSPH
CCT6A
ZBTB45
POLR3B
ZNF862
SCAND1
FDFT1
MED23
LDHA
RUVBL1
NF2
CEP63
ANAPC13
H4C15
TOM1
SH3TC2
HIBADH
PLXNA3
MRPL40
HIRA
TMEM39A
HGS
DENR
ARL16
SIRT2
NFKBIB
PAQR4
CEP164
RUVBL2
PLA2G7
MAMSTR
GYS1
FOXA2
GLIPR1L1
CAPS2
NAT10
SUPT4H1
AFF1
ETV6
ATP5F1E
HSCB
CHEK2
MTMR12
GTF2H2C
GTF2H2C_2
COMMD2
ANKRD17
SNX17
PDIA4
EIF2B4
ZSWIM4
SLC46A3
LMTK2
HEXA
FAAP24
CEP89
DAZAP2
RMI1
OTUD7B
INTS12
HNRNPK
GSTCD
DGCR8
ZNF77
SPATA17
GPATCH2
G3BP1
CTDP1
ZNF564
KMT2E
BCAS3
H4C12
CUL2
NDUFS7
ANKZF1
RLN1
CCNB2
UQCRH
MAOA
LRRC41
GOT1
GALK2
COPS2
RBM48
PEX1
LAMP1
CCDC102A
SIGMAR1
RPS19
NOL7
MRPL44
ACAT2
CDC42BPG
SHOC2
BBIP1
ACTN1
PER1
F11R
WDR36
SRPK2
RPS29
RITA1
DDX54
ALKBH3
BICD2
NARF
DCUN1D4
SPTLC2
SPATA5L1
GATM
PXMP4
TATDN1
NDUFB9
LENG1
GBA
TTC26
DPY19L4
STAT1
DRAP1
C11orf68
MRPS23
RWDD1
ENSA
SKA3
MRPL57
ERCC1
JPT2
ZNF143
PCNX3
PABPN1
MAP3K11
H2BC12
H2AC12
WDR11
SLX4IP
MKKS
RBBP6
LYRM1
DCUN1D3
SP1
SDHAF1
PGBD2
CBWD6
RFX1
RNF139
PRKCZ
YIF1A
TMEM151A
EIF1AD
BANF1
MAP1LC3B
FBXO31
ARHGEF5
TBL3
WDR61
SPSB3
SC5D
OBP2B
NUBP2
METTL3
TRIP10
GPR108
FAM98B
PPP4R3B
GFM2
ERCC5
TARS1
CDKN3
TESK2
CCDC77
COMMD9
ARL14EP
HMGCR
STRIP1
MICAL2
HACD2
ZBTB3
GTF3C3
RCL1
ISG20
ENPP5
FRA10AC1
FASN
PCP2
PRR12
TNRC6B
TCERG1
SLC44A1
CPSF4L
UGP2
TMEM65
MCM10
DNM2
USP1
SETDB2-PHF11
SETDB2
CAB39L
TBC1D10B
PEX3
MYLPF
ADAT2
CDCA3
DUT
ZDHHC5
STARD3
SAP30L
NLE1
RBBP5
P4HB
AP2B1
GOLGB1
GARS1
CDK12
ZNF138
RRP15
RPS7
NOP53
FZD1
SASH1
TUT1
TSR3
TPST1
SPAG7
GNPTG
ZNF92
RUNX1
TDRD7
UBE2I
MTIF2
ZNF212
CLDN3
MRM3
GLOD4
TMEM222
TTC23L
PPP1R1B
GET3
SIPA1L2
RTTN
ITGA2
HSPA5
ARHGEF7
SFXN5
FAM20B
TMEM94
CCNI
NDUFB2
MED30
SPNS1
GATAD2A
FAM240C
LFNG
NQO1
RECQL
GOLT1B
NFIB
VDR
TIMM50
MYEOV
LMO7
ZNF165
SLC35B4
RAB5B
EFNA4
CXorf56
RPL37
PPP2R5A
USP48
RPL13A
ZNF830
HAGH
FAHD1
CCT6B
VPS26B
NCAPD3
GSN
SORT1
IMMP1L
ELP4
BORCS6
WDR93
TTC30B
TOMM40
PEX11A
FAM133B
EIF4A1
C1orf174
AMACR
RAB1B
PLEKHM3
MBD4
IFT122
CXXC1
TRAPPC9
NOL11
HSP90B1
HSD17B12
FLAD1
ZNF180
XKR8
TRMT2A
RANBP1
PGAP2
MAN1A2
CLTC
SRM
LRRC6
DNAJA4
CHD2
MAN2C1
ZSWIM3
SSR3
ACOT8
SUPT7L
SLC4A1AP
DYNLL1
TMEM183A
TMCC3
RAD21
HNRNPA2B1
CBX3
RPS6
AHCYL2
ZMPSTE24
IGSF10
STAT3
GCA
FAM126A
ERCC6L2
ACTL6A
OTULIN
HNRNPAB
TRIB1
MRPS15
CLN5
WDR70
SMC4
PDE4DIP
NAGPA
MRPS35
IFT80
DSTYK
TPRN
TMEM203
NDOR1
CCDC174
PRKCSH
CCDC151
TATDN3