ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359919 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◣ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L8
MAMDC2
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
METTL25
CCDC59
CCT2
MAN2C1
H4C14
IMP3
S100A13
CHTOP
MTRNR2L9
NDUFS7
SLC3A2
H4C15
SRCAP
LOC730183
LRP6
WDR74
PRMT2
CZIB
TMEM248
TMEM223
TMEM179B
OIP5
NUSAP1
TTLL4
TBRG4
POLR3B
MTRNR2L10
LARP1
NFYC
ATF7-NPFF
ATF7
SPAAR
RTTN
STEAP2
CLK1
ZSCAN22
SF3A1
CCDC157
SRSF7
DCXR
HMGB1
USPL1
TMED1
MBD4
IFT122
EIF4B
AMACR
HSPBP1
BRSK1
PDCD2L
NBPF1
CAAP1
TMBIM6
EMILIN2
SPOP
DCP1B
SUPT7L
SLC4A1AP
ZSCAN25
STAMBPL1
TP53I3
UTP23
PDCD6IP
RPL5
VPS37A
CNOT7
H2AX
CAPRIN2
DNAJB12
SMIM15
PISD
EIF2D
POLD1
NDUFB3
FAM126B
LMTK2
RSL24D1
SPTLC1
UBE3B
KCTD10
SNX8
SHANK3
NAGK
SMIM10L1
PRH1-TAS2R14
PRH1
ST3GAL3
WASHC4
TFDP1
CBWD5
RARG
SEMA4B
TTC14
COL23A1
FAM227B
DTWD1
TRIP4
VAMP4
DDX41
CYP51A1
TYW1
SBDS
DENND4A
TOLLIP
RBM28
UFC1
C12orf66
PGBD2
GPN2
NDUFS3
KBTBD4
EIF3CL
EIF3C
MRPL53
RAD51
PNP
POLR2J3
DSTYK
TNPO3
KTI12
ESYT2
CYP27B1
METTL1
EEF1AKMT3
GNL2
TMED3
XRCC6
KIAA1958
DESI1
C9orf147
MTIF2
TAF10
FBXO22
STRAP
EIF3E
MPHOSPH10
MCEE
L3HYPDH
JKAMP
BAZ1B
ZNF408
ARHGAP1
POLG
ZNF687
DIABLO
PDE4A
AASDH
HMGCR
STAT6
MRPL44
THNSL1
GMNN
THG1L
MTPN
LUZP6
MRPL1
LEO1
SLC52A3
MRPL45
VAMP1
AKR1A1
PPM1D
CBWD3
PAFAH1B2
GRPEL2
TRIM59
H3C15
H3C14
H2AC19
H2AC18
AKAP9
TOR1AIP2
TOR1AIP1
P2RY2
XPR1
TMEM88
CUL5
REX1BD
LUC7L2
XPOT
SMDT1
WDR6
GOT2
NBN
CRYM
BORCS6
KLHL12
SNAPC5
OGDH
STYXL1
MDH2
MAP3K5
SF3A3
TTC4
AAAS
MRPS17
PRC1
SSBP1
PRCP
DDIAS
HACD2
MFAP3
FAM114A2
KLHL22
HUS1
SAR1B
NOP16
HIGD2A
C6orf226
PPFIA3
LIN7B
C19orf73
TCAF1
COX7C
DUS3L
TLDC2
ANO10
ABHD5
CYCS
MRPL48
TSFM
RPS13
SEPTIN2
HDLBP
TNRC18
FNTB
KMT2E
LARP4
FAM186A
BORCS7
MZF1
PPP3CA
MUC3A
SUGCT
MPLKIP
MGAT1
OSGIN1
MCCC1
ACYP2
H2BC7
H2BC5
H1-4
H3C4
H2AC7
MRPS36
PIK3R3
LSM5
KANSL1
COX14
STXBP3
SLC12A9
MEST
TARBP2
MAP3K12
FUT11
MTRNR2L6
NUP107
KRT8
TXN2
PFDN5
MYG1
KRT18
PSME3
TSSC4
SWSAP1
TEKT2
ADPRS
EIF3J
FIGNL1
HEXA
ATP5MC2
GTPBP3
ANO8
SCAMP1
FBXL13
ARMC10
PPIL3
NIF3L1
MMADHC
EDEM2
LYSMD3
NDUFB2
ASNS
HPS5
GTF2H1
ZNF394
ZKSCAN5
GOLPH3
PPIL2
MED11
UROS
BCCIP
SLC24A1
ATG9B
ABCB8
MRPL3
FRMD3
CEP83
ADAM15
YEATS4
RAB27B
NACA
CCDC97
CDK5RAP1
C19orf33
RAB19
SEH1L
DCPS
PPIP5K2
AHCYL2
PMPCB
BLOC1S2
YARS2
MRPL42
NOP53
DMAP1
PTPA
CRAT
DHPS
CCT5
ATPSCKMT
C12orf65
ZNF391
PLK3
ANO6
MLF2
LRRC73
WDR97
MAF1
MALSU1
PLEKHM3
PSMD9
HPD
SNRPE
VPS52
RPS18
MRPL35
IMMT
TPM3
LLGL2
WDR4
NHLRC1
UNC13B
DPY19L4
SECISBP2
LTA4H
YTHDC1
CNOT2
METTL7B
RFC4
TRIM48
MRPS31
ZNF165
PIGO
ZBTB45
TARS3
TDG
CCDC43
AGK
RNF111
GALT
LRATD2
ITGB3BP
EFCAB7
TIPARP
SLC35E3
H4C5
H2BC12
H2AC12
HAGH
FAHD1
SLC25A28
COX18
PAIP2
PTPN6
MYLIP
C12orf57
MCRS1
CHST12
RAB5B
SRGAP1
DDX46
CHAC2
RPS27L
RPS6
ELAC2
POLR2J
BNIP2
INTS2
ATP5MF-PTCD1
ATP5MF
CLUH
ABHD11
ZMPSTE24
ZNF212
GARS1
DCAF10
MRM3
GLOD4
NRL
DCAF11
TATDN3
NSL1
SLC25A21
MBTPS2
SNX17
EIF2B4
SND1
TMEM87A
GANC
SLC25A13
CASC3
BCDIN3D
FAM71E1
EMC10
TMBIM4
TTC26
PDE7A
CEP70
SIRT6
ANKRD24
DDX21
CALU
TBC1D19
BLOC1S6
HNRNPU
GPR35
TMCO6
FGFR4
ASCC3
ORC4
MBD5
CBX5
HNRNPA1
SLC11A2
GABPB1
GHITM
RAPGEF6
TAF5
DLG4
ACADVL
PEX3
ADAT2
CCNC
CCNB2
GPN3
FAM216A
TMEM251
MOAP1
RBM6
CFAP298-TCP10L
CFAP298
KBTBD8
TMEM168
BBS9
FAM120B
PCID2
CUL4A
B9D1
PDIA3
SMPD1
UBE2K
RPS26
YY1AP1
DAP3
SMARCAL1
RAG1
TRAF6
EID1
NDUFAF2
ERCC8
TBK1
TRUB2
COQ4
NUP155
COMMD1
CCT4
POLR2J2
SEC11A
FIS1
MBD1
H4C4
ZNF561
H2BC6
USP30
GET4
MRPS35
NUP214
THOC3
LPCAT4
ZCWPW2
AZI2
BMF
RNF14
TPRA1
FAM168A
ATF2
MDP1
CHMP4A
NPM1
CHMP7
WDHD1
SOCS4
NXT1
SLC25A6
PDE4DIP
MRPS18C
HELQ
PSMC4
PRKRIP1
ARIH1
TRAPPC4
RPS25
ATG5
FAM185A
SLC10A7
RAD51AP1
C12orf4
NARF
FAM133B
CHCHD3
RINT1
PAAF1
COA4
SLMAP
ZNF250
INTS7
DTL
SRSF2
MFSD11
LRRC57
HAUS2
TMEM238
RPL28
TFB1M
CBWD6
NME1
WDR61
USP8
PPP1R3D
FAM217B
NAT10
GLCE
TRMO
MAD1L1
FANCA
ZNF770
TOMM22
MTHFS
OCIAD1
EIF4A3
CMTR2
PIGF
CRIPT
ICE2
HECTD1
SLF1
KIAA0825
RPP25
PRPF8
TFPT
PRPF31
TMEM209
SSMEM1
POP7
ERAP1
GOLGA3
DUS2
DDX28
INO80
STT3B
PCNP
MARCHF9
CDK4
POLR2G
FANCD2
ADIPOR2
H4C8
RTF1
DNAJC19
TRIM36
BRF2
HCFC2
GLT8D2
KAT7
SCAND1
CCDC77
PARL
PPA2
PARP2
NUDT15
YWHAE
KDM5A
CETN3
ATG4C
GSTM4
TNS2
PLEKHF2
CRADD
EIF2S1
ATP6V1D
OTULIN
MTERF4
NDUFB7
SDHAF3
ZCWPW1
MEPCE
TAF13
NUTM2E
RFC5
DCP2
TMED5
CCDC18
BPHL
RASA1
TRUB1
SLC25A17
RPRD1A
NOP2
KLHL18
KIF9
ANKRD13D
CNPY3
NUP42
PCNA
DCTPP1
ZDHHC17
PTPN23
NAPRT
MAP4K5
ATL1
GTPBP10
FKBP9
PSMD8
IPP
CFAP43
GFM1
TMED4
SCFD1
ADSL
H2BC4
H2AC6
CTSL
NAV1
HAUS1
CLSTN1
ATP5F1A
RPS3
COA1
PGAP2
PPWD1
CENPK
WDR70
FGD4
SUMF2
PIGW
MYO19
SLC12A6
NUTM1
NOP10
KBTBD3
AASDHPPT
SCAMP2
RGL2
RASSF6
ACY1
EFHD1
STX18
AK2
CSDE1
PUS7L
IRAK4
CCNT1
DTD2
KIAA1217
TFRC
RPS15A
SMIM4
NT5DC2
TRIM56
PDIA4
SEC31A
RPL6
PTPN11
AP2B1
NAA35
SCYL3
PLPBP
CENPS-CORT
CENPS
PLD6
PWP1
CAP1
CLDN4
NOL7
ZNF786
ZFC3H1
THAP2
FBXW7
KNL1
TEDC2
ZBTB49
LYAR
KITLG
ADPGK
NOP14
GRK4
SPATA5L1
GATM
MVK
ZNF672
FOXJ3
METTL8
DCAF17
SDHD
BRMS1L
THBS4
MTX3
ASH1L
SMG8
PA2G4
EPS8
TMEM267
ESR2
EXOSC10
TBC1D2
HSD17B4
SERINC4
PPP2R5C
LPAR5
HYPK
SRRT
PNPLA8
UNC50
COA5
TMEM106B
MACROD1
DYNC2I2
SRSF11
PSMD7
CDK19
AMD1
ZBTB6
RAB11A
C6orf136
TMEM116
SLC1A3
ERP29
PRR19
PAFAH1B3
THAP5
DNAJB9
MRPL24
ZNF740
CSAD
PCLO
YWHAG
EPRS1
RIF1
L2HGDH
DMAC2L
PLPP5
CBWD1
ILF3
EXO1
ATG101
IVD
COX5A
MAPKBP1
CSE1L
STYK1
POLR2M
TIMM10B
BCKDHB
MIF
POLB
TMEM260
TET3
TARS1
OGG1
MAP2K1
SPRED1
ATAT1
SGK2
ANAPC10
ABCE1
RPP21
NOL12
JMY
PMVK
OARD1
NFYA
DECR1
RMI1
HNRNPK
METTL2B
ZC3H10
RPL41
AGL
C15orf61
UTP20
METTL2A
SETD4
TIMM13
RPL39L
PPP2CA
GLIS2
ETNK1
MRPL16
USP48
CEP135
ARHGAP18
APC
PBLD
HNRNPH3
CTH
C11orf65
DPAGT1
C2CD2L
ARHGAP9
ZFYVE19
DNAJC17
P4HA1
CALCOCO2
LCMT2
ADAL
MBD6
DDIT3
VWA7
SYNCRIP
MARS1
GTF3C4
DDX31
BCAT2
OTUD7B
MAPK1IP1L
PRMT3
PRMT9
POLE3
C9orf43
HEMK1
C3orf18
GPT2
LEMD3
ASCC1
ANAPC16
MOCS2
MATN1
MRPS30
SEC24A
CHEK1
RHBDD1
FXYD5
RNF13
BNIP1
MICU2
SLC16A1
ATR
LFNG
FEM1B
WWTR1
PGM2
EVI5
FAM102A
TPST1
CCNI
HNRNPA0
TBC1D5
TNFAIP8
ABCF1
IPO8
TSTD3
SARS1
PKP4
CCDC148
RSU1
MTRNR2L1
PMF1-BGLAP
PMF1
THAP10
LRRC49
EIF4H
UBOX5
FASTKD5
NDUFA5
SARNP
ORMDL2
YKT6
MAGEF1
NCK1
SNUPN
SNRNP35
ATP6V1FNB
ATP6V1F
ZFYVE27
AGGF1
VPS39
TXNRD1
MAPK1
GINS3
FEM1C
PSMD14
PIF1
CRCP
CEP120
ITGB1
PPP5C
RFXANK
BORCS8-MEF2B
BORCS8
TMEM217
TBC1D22B
RAD52
CLPTM1
SNX13
NUP35
CDKN2B
C16orf46
RPLP1
PITPNM3
HDAC1
POC5
TEFM
CDKN2AIPNL
ISG20
GPHN
SLC6A6
LACC1
CCDC122
CREM
STARD9
CBY3
SUB1
MCCC2
SLX1B
SLX1A
BOLA2B
BOLA2
RABGEF1
ERCC6L2
SPNS1
FDXACB1
C11orf1
ZNHIT2
MRPL49
FAU
SULT1A4
SULT1A3
TMEM138
CYB561A3
IPO11
SF3A2
PLEKHJ1
UMAD1
SKAP2
FTL
EIF3M
NFX1
MINDY2
SLC35A4
APBB3
EMC4
GUCA2A
PGLS
H3C7
H2BC9
NIPA2
H4C7
CDK18
CCDC200
SIRT4
ENSA
C7orf25
ANAPC5
ARL4A
RRN3
MNAT1
CNDP2
NDUFA12
RBX1
BSDC1
RRP7A
BCLAF1
TCTA
RHOA
ERI1
PEF1
CAD
CYB5R3
AURKB
AMHR2
PSMD6
GFM2