ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10175283 | PANC-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◣ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L2
MSH3
DHFR
KIF5C
RGPD1
RGPD2
MTRNR2L8
EPN1
MTRNR2L1
VPS37B
SPAAR
HRCT1
MAMDC2
PBX2
GPSM3
FRG2C
FRG2
ADGRA1
ART1
MTRNR2L9
BCL9L
SNX16
FOSL1
SPTBN1
OPRL1
RGS19
LKAAEAR1
MUC3A
DUX4
COL23A1
TMEM242
CTDP1
MRPL23
GTPBP6
SLC6A19
AFAP1
PHRF1
TECR
DNAJB1
PTPRN2
CYP4F11
MMP8
IRF2BP2
CHI3L2
LGR6
BMP5
OR2T1
MICAL2
OSGIN1
MRPS10
SDF4
B3GALT6
C1QTNF12
CRYAA2
CRYAA
DRD4
NWD1
PSAP
SYT8
ADAMTS9
VWA1
TMEM88B
MYADM
YBEY
MCM3AP
PMF1-BGLAP
PMF1
GALR1
LOC102724770
DGCR6
NPDC1
ENTPD2
NEUROG3
NOXO1
SYNGR3
GFER
SH3KBP1
ZNF229
FGFR2
SART1
KIAA0895
ANLN
EGR2
RORC
C2CD4D
LINGO1
FLT4
WBP1L
TRNP1
CFLAR
USP17L20
USP17L22
USP17L11
USP17L18
USP17L17
USP17L19
PLCE1
ZNF285
FBN3
GAGE8
GAGE2E
GAGE2D
GAGE13
GAGE12J
GAGE12G
GAGE12D
SPATA20
EPN3
OTUB2
PCBP2
PRR13
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
AURKAIP1
CCSAP
BTNL9
SYNGR4
MUC20
MAST2
AGPAT3
ARHGEF12
TLCD5
ZFP37
MTF2
SBNO2
UCKL1
ZNF780B
HMX2
HMX3
LOC102725023
KIR2DS4
KIR2DS2
KIR2DL3
KIR2DL2
KIR2DL1
KRTAP21-2
ARHGEF1
SYNJ2
ARRDC4
RNF13
MYEOV
PIH1D1
ALDH16A1
ITGA6
GSN
NKX1-1
RPS7
PLA2G7
MYT1
ALG10
AP3S2
GBA
ANKRD10
BAIAP2
PTF1A
AGRN
NEK6
ITGB3BP
EFCAB7
KRT17
FCMR
HLTF
SEC22B
COPS7B
PDE6D
PAFAH2
SYTL2
SDHA
CCDC127
TNRC18
LOC100129484
PAX4
APBA2
CCNC
LARP6
FRA10AC1
USP30
PDCD6
SLC16A11
NPIPA1
HBP1
SEMA3B
WDR36
NSA2
GFM2
PCDH9
GRK1
SMC4
IFT80
PLD3
C19orf47
LTBP1
KIF12
IL17RB
CHDH
VGLL4
CCDC9B
SRPK2
ALKBH3
BSG
YWHAQ
GTF3C3
C2orf66
MDH1
WDPCP
ZNF780A
ARID5A
RBBP5
TM4SF1
GALK2
ZNF24
COPS2
TINAGL1
RTKN
SUGCT
MPLKIP
BRSK2
PELI1
TMEM262
PAQR4
KREMEN2
SUPT7L
SLC4A1AP
LGALS16
KANSL1
KCNH8
HCK
STX16
ZNF12
ZDHHC6
VTI1A
EAPP
KMT2A
INPP5A
NPEPL1
PUS10
PEX13
NDUFB3
FAM126B
COQ3
KIR3DL2
NDUFS3
KBTBD4
FAM180B
ZNF546
MRPL44
GLI2
SF3A3
EFCAB2
ALG10B
KRR1
TRIM2
GABPB1
PTMA
WEE1
EIF2D
PDE6A
CLC
DSTYK
ZBTB32
ETV6
RAG2
IFTAP
NXT2
SSBP1
WDR11
BRD2
NUF2
KDM3A
EIF3F
G3BP2
ZNF391
SLC35E2B
PAX8
SLC35E2A
PKDCC
POR
PPDPF
ATG101
SMARCD2
CDYL
SNAP29
PI4KA
PFDN4
IQCH
AAGAB
POLG
PDXDC1
PRKCI
PLEKHB1
TBL3
MYH14
LZTS2
PARK7
DAB2IP
TAF15
EIF3B
RNASEH2A
PRDX2
FAM53C
CDC25C
PPIB
DOLPP1
MYO5C
LRRC75B
GGT1
SOWAHA
OGA
PROX2
ZNF775
CNOT6
KLK6
LSR
PGBD4
EMC7
AKIRIN1
GIT2
ANKRD13A
WDR97
MAF1
CYC1
CLDN9
PCDH1
YY1AP1
DAP3
CENPP
PTDSS1
MTERF3
GNB2
FAM227B
DTWD1
KHSRP
SMIM41
MYL12A
LRATD2
RAB4B
MIA
EED
FRAT2
CMC2
CENPN
ATG16L2
TMEM129
TACC3
RHBDD3
EWSR1
SLC35A5
ATG3
USP15
MYO9B
HAUS8
UIMC1
PLEKHG4
PIK3R3
CYP2W1
COX19
SPATC1L
FRAT1
FOS
PRR19
PAFAH1B3
CDCA7L
FAM102A
HMGCS1
SOX8
LMF1
NDST2
UNKL
MRPS24
SETD5
C16orf91
PMVK
TNNI3
DNAAF3
CNFN
SLBP
PRKDC
MCM4
PPP2R2C
STIP1
MYL12B
UROS
PDE8A
BCCIP
LY6L
PGP
FAM72C
PTOV1
DNMT1
ZNF219
TMEM253
CFDP1
CIC
ETNK1
ATP6V0C
AMDHD2
COMMD6
NOTCH1
SELENOW
ZNF217
SRGAP2B
FAM72D
TIGD5
EEF1D
ARNTL
KMT5B
MLST8
ETV2
COX6B1
BRICD5
MAT2A
KAT7
WWOX
UBE2C
RASSF7
LMNTD2
FUS
TAF6
MBLAC1
CNPY4
IQCE
BRAT1
DGAT2
RMND5B
PITPNM1
TMEM160
PPP6R1
NUCB2
BZW2
ANKMY2
ZNHIT1
PLOD3
PAXIP1
UCHL3
AMOTL2
FLCN
LAMB3
TMEM63A
LEFTY1
ABTB2
TESC
RNF103-CHMP3
RMND5A
PPP5D1
PNPO
CALM3
PRDM10
RPS29
BCL6
WWP2
WASL
SHKBP1
TSKU
GATAD2B
TRIP4
PCLAF
WDR38
RPL35
ARPC5L
XRRA1
SPCS2
E4F1
OXR1
NCOA3
HMGB1
STK35
SRGAP2C
FAM72B
ACSS1
HNRNPL
USPL1
KANSL3
FER1L5
TEPSIN
NDUFAF8
DGLUCY
TRAPPC6B
PNN
MTBP
MRPL13
E2F6
CDIPT
ZNF609
SAP30BP
RECQL5
H3C6
H2BC8
H2AC8
CCDC59
SLC25A42
ANKRD39
NOL8
NOCT
ZNF8
PROSER3
LIN37
HSPB6
FAM83D
CNOT3
ZCCHC4
LIN54
ZBTB3
CDON
C21orf91
MRPL20
CCNL2
TSPAN4
POLR2L
CD151
MRPS31
MAPK6
USP3
DBP
CA11
TEDC1
RRBP1
FAM227A
CBY1
PRRC2B
ZFAND3
C6orf226
FANCI
SLA2
UBE2B
CDKL3
PIP4K2B
DPP9
ANP32A
TMEM260
DPY19L4
GTF2IRD2B
TTC9B
CCNP
DRAP1
C11orf68
ULK4
H3C15
H3C14
FBXO5
ARAF
H2AC19
H2AC18
FGFR4
PSMD14
H4C15
H4C14
PSIP1
ARHGAP19
ZFAND4
RBM7
C11orf71
GOLGA6L10
KRT19
KRT15
SRGAP2
LUC7L2
FAM72A
PLP2
MAGIX
CABP7
FYN
TRAPPC9
OGDH
CASKIN1
SERTAD1
DNAJA4
SYVN1
LAD1
HHIPL1
CCDC85C
KPNA2
RRM2
TP53BP2
CNOT1
SRI
FDFT1
TMEM45A
LYSMD2
TTLL7
FRMD5
ZNF335
CNP
TSKS
RPN2
MROH8
AP2A1
UFSP2
TOP2A
C4orf47
NDUFB1
HDAC2
CPSF2
TANGO2
ARVCF
MTCH1
HBD
HBB
MIA2
CYP2R1
LEPROT
LEPR
DISP3
TUBB4B
STK32C
SMIM35
LRRC27
FAM166A
THOC1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
TMOD2
PRCP
DDIAS
SOD2
NCDN
KIAA0319L
STX18
SLC5A1
KANK1
ANKRD12
TES
RUBCNL
MRPS11
MRPL46
TCP11L2
PRKACA
SMC3
ANP32B
LRR1
TARDBP
RPL22
RNF207
PRDX1
UBA1
RELA
ZMYM5
RNASEK
CBX5
C17orf49
TNS2
PRR3
GNL1
HYAL1
ATAD2
SS18
TLE3
KCTD2
ATP5PD
STXBP3
DNAJC14
ATP8A1
RABGEF1
ARHGEF19
TMPRSS3
MRPL21
IGHMBP2
SLC38A2
LANCL2
TRAF2
RAB33B
CLDN12
OSBPL2
TBC1D17
PNKP
AKT1S1
SHROOM1
C6orf62
SP2
UBE2A
CXorf56
ATP5MC1
ALDH3B1
ACAP2
C20orf204
PSPN
ALKBH7
GLIPR1L1
CAPS2
RUVBL1
ITGB8
ZNF3
COPS6
WASHC5
NSMCE2
ZNF180
UQCRC2
TSPAN8
PDK2
BCL2L1
SORT1
HSP90AB1
MSANTD4
PPP1R13L
POLR1G
PLPP2
KMT5C
C2orf42
OTUD7B
FAM228B
FMN1
BAZ1B
CCDC85B
UQCRQ
LEAP2
KMT2E
GDF9
PTPRH
MBNL1
SELENOH
INTS12
GSTCD
MGRN1
PIF1
BOLA2-SMG1P6
NUP107
SKA2
PRR11
ADAP1
HECTD2
ZNRF3
GPR137
PLAG1
KCNK4
CHCHD7
BAD
ZMYM2
SLC11A2
CALU
CALR
ZNF572
PSMD6
TSC22D1
LRCH4
H2BC15
H2AC15
FBXO24
ATF7-NPFF
ATF7
HDAC1
TBC1D14
TMEM167B
FMC1-LUC7L2
FMC1
PRR15L
STPG3
ETV4
AKR1E2
HNRNPA1
PCYT1A
POLR2J3
BCAS3
UGT2B7
TMBIM4
SSNA1
ANAPC2
ABHD2
SIRT2
NFKBIB
CANX
PTPRA
PTP4A2
NBEAL2
CCDC12
TOM1
TBRG4
RASEF
EFNA4
SPRYD3
EIF2AK3
PACSIN2
PANK2
RAC3
TFPT
PRPF31
CNNM2
WRAP53
TP53
HPS5
GTF2H1
CENPE
ARHGEF38
TRPV4
OTOGL
VTCN1
EIF1AD
CST6
COQ8A
BANF1
NFE2
KIF1B
MRPS23
DUSP6
GOLGA6L3
GOT1
TMEM168
PRR7
NLK
RPS3
H2AZ2
RPL19
CACNB1
HOMEZ
GTF2H2
SEPTIN9
ISOC2
ZNF687
UBALD1
TMEM94
SLC33A1
LSG1
MRPL40
HIRA
ANKHD1-EIF4EBP3
ANKHD1
FARSA
SP1
PPM1D
SLC24A1
INTS14
TRIM37
INAVA
SLC34A3
ATG9B
ABCB8
MADD
RAD23A
CLTC
HR
UTP18
MBTD1
ATP5F1E
NFYC
FRMD6
SLC35B2
RNF43
NFKBIE
UXS1
TUSC2
LMCD1
HYAL2
TP53I3
SF3B6
NARF
CYBC1
MED23
FAM20B
ENPP3
ADPGK
PELATON
MYBL2
RNF6
SRCIN1
GOLGA6L4
DCLRE1B
AP4B1
SLC44A1
OLFML2A
NR6A1
TESK2
MMACHC
CCDC163
PDIA4
EMSY
IVD
DYNLL1
GTF2H2C_2
ZNF484
RDH12
RDH11
USP17L21
USP17L12
RBM42
PKNOX1
GATAD2A
PEX3
ADAT2
VBP1
SUN3
C7orf57
CEP63
ANAPC13
PRR14
MAST4
FBRS
SASH1
HACD3
CCDC116
TUBD1
RPS6KB1
MYO19
GGNBP2
ACVR1B
MCM7
AP4M1
PDE8B
TMCC3
FAM86B1
UFD1
CDC45
TMEM258
SSR3
FEN1
DYNC2I1
SLC25A10
MRPL45
MRPL12
HNRNPUL1
GIPC1
WDR62
THAP8
ZNF574
MACC1
UNG
ALKBH2
MTSS2
CSNK2A1
ZKSCAN1
UGP2
RCN2
NUDT2
KIF24
FAM222B
PRKAB2
CHD1L
ARHGAP39
GET3
COMMD2
TOMM40
EFNB2
CD164
SHF
SCP2
HDGFL2
FZD1
TADA3
BACE1
ARPC4-TTLL3
ARPC4
UBC
SFXN5
SREK1IP1
CWC27
TSPAN31
CDK4
COA1
ARHGEF7
TAF13
DHX36
TMTC4
TMED9
SORBS3
LYRM1
DCUN1D3
B4GALT7
FBXO32
RAB5B
PMEL
CDK2
TTBK2
FZR1
DOHH
GTF2IRD2
RAB28
PI4K2A
DIAPH1
INTS5
SNX17
GPR84
EIF2B4
CDKN3
PRKAG2
PTCD3
POLR1A
MAMSTR
H4C9
H2BC12
H2AC12
LEMD2
ZNF300
MIA3
FBXO33
SPTLC2
VMP1
PTRH2
TMEM60
PXMP2
POLE
PHTF2
EEFSEC
CNPY3
ZSWIM4