ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX718108 | hESC derived pancreatic cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◣ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
MTRNR2L8
COL23A1
MAMDC2
RGPD2
RGPD1
LOC102724770
DGCR6
PTPRN2
MTRNR2L1
FRG2
FRG2C
MUC3A
DUX4
MTRNR2L9
FAM118A
ADAMTS9
ART1
NOC4L
DDX51
LGR6
GTPBP6
H3Y2
ZNF195
CEP295NL
IL32
RANBP17
PRLHR
LOC100130520
CD300H
C17orf77
STBD1
OPRL1
RP1
UCKL1
MMP8
ZNF367
TMEM242
CALY
PHRF1
RGS19
LKAAEAR1
RAP1A
USP17L20
USP17L22
USP17L21
USP17L12
UBR7
GON7
LINGO1
FOXO3B
TRIM16L
USP17L18
USP17L11
USP17L10
MDM4
CYTH4
ZNF347
CNOT3
GPAT4
CRYAA
CRYAA2
FAM163B
AFAP1
USP17L7
USP17L2
DRD4
OSGIN1
KLC2
MRPL23
COL6A2
ZNF285
SCGB1C2
ZNF723
UCN3
BTNL9
ABCA7
PIH1D1
ALDH16A1
VCX3B
GABRB3
EPN1
SPATC1L
NKX1-1
RPEL1
MTNR1A
TEX19
FCMR
KRTAP21-2
RPH3AL
GALR1
SLC35E2B
PAX8
BCL9L
PKDCC
SLC35E2A
TINAGL1
ARRDC4
POR
RORC
C2CD4D
SNAP29
PI4KA
NOXO1
TAF15
PBX2
GPSM3
POLG
PARK7
IQCH
AAGAB
TBL3
SYNGR3
GFER
SH3KBP1
DOLPP1
PRKCI
FAM53C
CDC25C
SNX16
PPDPF
PDXDC1
KLK6
PGBD4
EMC7
ZBTB32
SDF4
B3GALT6
PPIB
EIF3B
C1QTNF12
KHSRP
RNASEH2A
PRDX2
OGA
GIT2
ANKRD13A
RNF13
CDYL
DAB2IP
WDR97
MAF1
CYC1
LRRC75B
GGT1
CLDN9
PFDN4
MTF2
ZNF775
CNOT6
KIF12
LZTS2
RHBDD3
EWSR1
FRAT2
AKIRIN1
LSR
PROX2
SMIM41
ATG101
PIK3R3
EED
HMGCS1
PTDSS1
MTERF3
SLC35A5
PCDH1
ATG3
TECR
DNAJB1
GNB2
RAB4B
MIA
PRR19
PAFAH1B3
STIP1
MYO9B
HAUS8
ATG16L2
MRPS24
CDCA7L
YY1AP1
DAP3
NOTCH1
KAT7
NDST2
COMMD6
UBE2C
SEMA3B
RASSF7
LMNTD2
UIMC1
MYL12A
SOWAHA
PITPNM1
TMEM160
ETV2
COX6B1
BZW2
ANKMY2
PTOV1
PMVK
KCNH8
LAMB3
UROS
BCCIP
IQCE
BRAT1
USP15
UCHL3
PGP
CNFN
CMC2
CENPN
TMEM129
TACC3
SLBP
ACSS1
MLST8
BRICD5
FOS
FAM72C
FRAT1
WASL
CIC
ZNF219
TMEM253
DNMT1
FLCN
SETD5
FUS
STK35
BCL6
TMEM63A
LEFTY1
PLEKHB1
HNRNPL
CDON
MYH14
UNKL
SHKBP1
C16orf91
TNNI3
DNAAF3
C21orf91
MRPL20
CCNL2
TSPAN4
POLR2L
CD151
TEPSIN
NDUFAF8
DBP
CA11
ZNF8
PAXIP1
PNPO
PROSER3
LIN37
HSPB6
PRKDC
MCM4
TESC
ETNK1
SRGAP2B
FAM72D
FAM83D
TAF6
MBLAC1
CNPY4
ARNTL
HMX2
TTC9B
CCNP
NOL8
CENPP
ARAF
PSIP1
SELENOW
RRBP1
UBE2B
CDKL3
RBM7
C11orf71
WDR38
RPL35
ARPC5L
PRDM10
PDE8A
LIN54
SLC25A42
ATP6V0C
AMDHD2
SPTBN1
HHIPL1
CCDC85C
RRM2
MYL12B
CNOT1
TIGD5
EEF1D
IRF2BP2
PIP4K2B
TMEM45A
E4F1
IL17RB
HMX3
CHDH
FRMD5
XRRA1
SPCS2
TRIP4
PCLAF
TSKS
RPN2
MROH8
AP2A1
UFSP2
TOP2A
C4orf47
TANGO2
ARVCF
RNF103-CHMP3
RMND5A
HBD
HBB
FOSL1
C6orf226
WWP2
CYP2W1
COX19
TUBB4B
FAM166A
ULK4
NUCB2
CASKIN1
SYVN1
DGAT2
SLC5A1
CDIPT
PLEKHG4
PRKACA
PLP2
MAGIX
PPP5D1
CALM3
MTBP
MRPL13
H3C15
H3C14
CCDC59
H2AC19
H2AC18
TARDBP
H4C15
H4C14
UBA1
RNASEK
C17orf49
ZFAND3
ZNF335
FANCI
ANP32A
TRNP1
TTLL7
TRAF2
PSMD14
TRAPPC6B
SOD2
PNN
OXR1
ARHGEF1
SERTAD1
PSPN
ALKBH7
MRPS11
MRPL46
SMC3
ZNHIT1
PLOD3
MSANTD4
TP53BP2
PRCP
DDIAS
PPP1R13L
POLR1G
HDAC2
RMND5B
ITGA6
GOLGA6L10
RPL22
RNF207
UQCRQ
LEAP2
GDF9
SRGAP2C
FAM72B
PRR3
GNL1
CFDP1
OGDH
DPP9
ADAP1
TBC1D17
PNKP
AKT1S1
ANKRD39
ZMYM2
LUC7L2
SS18
CCDC9B
SYNGR4
HDAC1
STX16
ACAP2
FBXO5
PRR15L
STPG3
PMF1-BGLAP
PMF1
ABTB2
DISP3
HNRNPA1
CBX5
SP2
MYT1
ZFAND4
UQCRC2
TRAPPC9
TLE3
PANK2
WRAP53
TP53
CENPE
SLA2
GTF2IRD2B
ANKRD12
TNRC18
LOC100129484
KIF1B
TNS2
RPL19
NOCT
CACNB1
HOMEZ
CYP2R1
SRGAP2
MRPS31
FAM72A
PLAG1
CHCHD7
TCP11L2
THOC1
ATP8A1
UBE2A
MTCH1
CXorf56
USP3
SSBP1
SLC34A3
ATP5MC1
NFYC
RELA
NDUFB1
CPSF2
C6orf62
KCTD2
ATP5PD
SRI
STK32C
LRRC27
ZMYM5
OLFML2A
NR6A1
SKA2
PRR11
LRCH4
FBXO24
PTP4A2
NCDN
KIAA0319L
VBP1
SUN3
C7orf57
TMPRSS3
LANCL2
MYO19
GGNBP2
FGFR2
ZNF609
UFD1
CDC45
MAT2A
TMEM260
PDK2
WASHC5
NSMCE2
MACC1
NWD1
UNG
ALKBH2
KMT5C
FMC1-LUC7L2
FMC1
CSNK2A1
NLK
FDFT1
ISOC2
COQ8A
BAZ1B
EFNB2
SHF
HMGB1
CCDC85B
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
OSBPL2
TMTC4
USPL1
PIF1
FZR1
DOHH
GTF2IRD2
PPP6R1
MIA2
GPR84
PRKAG2
C2orf42
PTPRH
GOLGA6L3
FBN3
LEMD2
ZNF300
MIA3
STXBP3
SPAAR
HRCT1
DAZAP2
SSNA1
ANAPC2
ZNF687
FGFR4
MEIS1
ANKHD1-EIF4EBP3
ANKHD1
KCTD7
OSBP
FARSA
CALR
FMN1
LY6L
ARHGAP19
BAZ2A
ATP5F1B
BCL2L1
AP3S2
WDR62
THAP8
ODC1
KCNAB2
PAIP2B
PELATON
ARHGEF19
HNRNPUL1
ATAD2
OTUB2
FAM110A
SELENOH
ZBTB3
POLR2G
HNRNPC
ACTN1
HDGFL2
TFPT
PRPF31
PRRC2B
CD164
H3C6
H2BC8
H2AC8
HECTD2
ATF7-NPFF
ATF7
TTYH3
OPA3
UTP23
RBM42
AK2
VASP
TSKU
RASEF
TADA3
ARPC4-TTLL3
ARPC4
ZSWIM4
CCT5
ATPSCKMT
TTBK2
GOLGA6L4
MRPS10
CANX
ZNF572
TMEM168
SMARCD2
LEPROT
LEPR
ECPAS
GATAD2B
SP1
KIAA0895
FAM228B
FAM227A
CBY1
RAB33B
ACAT2
PELI1
CABP7
ZNF574
EIF2AK3
MADD
FANCF
UBALD1
TUSC2
MGRN1
HYAL2
HYAL1
UTP18
MBTD1
IVD
PSPH
CCT6A
NCMAP
FAM227B
DTWD1
ATG9B
ABCB8
SPATA20
EPN3
BOLA2-SMG1P6
TOM1
CFAP221
FRMD7
ATP5IF1
ING1
CARS2
ARHGEF38
RABGEF1
E2F6
SF3A3
RFX1
SMARCAL1
RAD23A
SLC25A38
H2AZ2
SCP2
CALU
INAVA
NUF2
FASN
GOT1
ZCCHC4
PRMT1
KATNB1
CSPP1
COPS5
PAK4
GIPC1
DGCR8
RAC3
CDK16
LRPPRC
RTKN
EIF2D
NRARP
ASH1L
TES
MOCS3
DPM1
RNF6
RLN2
ANKRD10
PIGW
KMT2E
TMEM218
SREK1IP1
CWC27
G3BP1
EFR3A
ABHD2
CCDC116
MRPL21
IGHMBP2
YJU2
PKNOX1
PTMA
PLPP2
TYK2
RB1
SIPA1L2
MRPL45
ENPP5
SIGMAR1
RBM27
GALT
PTCD3
POLR1A
YIF1A
TMEM151A
NARF
CYBC1
ZNRF3
F11R
PRR14
FBRS
CKAP5
TSPAN31
SIRT2
NFKBIB
CDK4
ALDH4A1
ZSWIM1
SPATA25
CCDC102A
ADGRG5
CEP164
LRATD2
NECTIN3
PPFIA3
LIN7B
C19orf73
VAMP2
PER1
SPTBN4
POLR2J3
ZBED6CL
LRRC61
ACTR3C
ZNF564
PPWD1
CENPK
TTF1
PRR25
GNG13
CFAP77
ITGB3BP
GGCT
EFCAB7
ECHDC2
EAPP
COA1
AURKAIP1
ATG9A
ANKZF1
KANSL3
FER1L5
MTMR12
MAMSTR
SRXN1
STX18
SPRYD3
PABPN1
GATAD2A
DIAPH1
DOT1L
MPHOSPH8
DCUN1D4
KLF5
FSIP1
CUL2
RUVBL2
GYS1
RMI1
HNRNPK
TNRC6B
ENSA
TPBG
SPTLC2
RAB28
KLF6
CWC25
RAB7A
PRKCZ
LSG1
KANSL1
JPT2
NUP107
CENPA
ALDH3B1
DNAJC14
HBP1
ADPGK
GTF2H2
KRT19
KRT15
HSCB
CHEK2
NBEAL2
DYNLL1
CCDC12
NDUFS3
KBTBD4
FAM180B
CCNB2
EGR2
WDR45
TOM1L2
DRC3
PHPT1
MAMDC4
AJM1
DIAPH3
ATP5F1E
TMEM209
SSMEM1
SHC1
IFT52
PDIA4
ANLN
RLN1
FLAD1
CKS1B
CDKN3
PLEKHG5
P4HB
ARHGDIA
FCHSD2
MTMR14
EIF3F
SLC24A1
SEPTIN9
SAP30L
PACSIN2
INTS14
CDK5RAP2
PTCD2
PRR12
MRPS27
KANSL2
AFF1
ZNF484
XPA
PPP2R5A
CNPY3
TP53I3
SF3B6
ETV4
SUPT20H
SRCIN1
RPS11
RPL13A
GNG3
BSCL2
SORT1
RAB40B
MZT1
BORA
C1orf198
ZNF143
SASH1
CHCHD6
SC5D
FRMD6
BCAS3
SDF2L1
LIPE
TRPM4
SPSB3
MRPS34
HRC
EME2
TOMM40
PPP6R3
AAR2
SRPK2
FBXO33
ZSCAN22
VPS37B
AGAP2
USP31
GSN
PRDX1
LENG1
TRIM29
PCNX3
MAP3K11
TRIP10
PDE6D
GPR108
COPS7B
RAVER1
ICAM3
ZBTB45
GTF2H2C_2
MBD1
CXXC1
CEP63
ANAPC13
TESK2
MMACHC
CYTH2
CCDC163
RAB40C
NPL
SCAND1
ZNF862
CLP1
RBM28
SRM
LDHA
RUVBL1
TDRKH
POLR3B
SLC46A3
MAPK9
NF2
HGS
ARL16
ZNF138
FAM240C
FAAP24
CEP89
NEUROG3
DENR
AKR1E2
ZNF77
HSPA5
FOXA2
SH3TC2
METTL3
FRYL
ETV6
LMTK2
HIBADH
IER5L
BMP5
ANXA2
ANKRD17
PLXNA3
MRPL40
HIRA
PPP3CA
PLA2G7
SPATA17
GPATCH2
GALK2
COPS2
WASF2
RCL1
INTS12
GSTCD
CCDC200
SNX17
GLIPR1L1
EIF2B4
CAPS2
ZNF92
UBALD2
PAQR4
KREMEN2
ZNF48
TBC1D10B
MYLPF
DYNC2I1
RAB5B
PMEL
HEXA
CDK2
COMMD2
MCIDAS
UGP2
OTUD7B
ADGRA1
MAOA
H4C12
H4C11
H2BC15
H2AC15
NAT10
CTDP1
DNM2
PMEPA1
GOLGB1
STAT1
C20orf204
ARID3C
VPS26B
NCAPD3
RPS29
RPS19
EIF4A1
CD68
SPAG7
SLC45A4