ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX359919 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◣ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L8
MTRNR2L2
MSH3
DHFR
RGPD1
RGPD2
KIF5C
ATN1
PTPN6
C12orf57
CCDC59
MAMDC2
PTPRN2
CCT2
MAN2C1
ART1
H3C15
H3C14
H2AC19
H2AC18
H4C15
H4C14
SNX33
IMP3
S100A13
S100A1
CHTOP
MTRNR2L9
SLC3A2
NDUFS7
LRP6
SRCAP
LOC730183
TMEM223
TMEM179B
PRMT2
CZIB
TMEM248
CRYAA2
CRYAA
DPP8
TTLL4
TBRG4
OIP5
NUSAP1
POLR3B
ATF7-NPFF
ATF7
NFYC
LARP1
SPAAR
HRCT1
MTRNR2L10
STEAP2
FOLR1
RTTN
CLK1
SF3A1
CCDC157
RAC3
DCXR
SRSF7
ZSCAN22
EMILIN2
PURA
HMGB1
USPL1
TMED1
EIF4B
PDCD2L
HSPBP1
BRSK1
AMACR
TMBIM6
EHMT1
ARRDC1
CAAP1
SUPT7L
SLC4A1AP
STAMBPL1
SLC25A6
MBD4
IFT122
DCP1B
ZSCAN25
FAM228B
TP53I3
SF3B6
CAPRIN2
H2AX
DPAGT1
HMBS
NBPF1
UTP23
VPS37A
CNOT7
MYO1G
SPOP
DNAJB12
LMTK2
NAGK
RSL24D1
NDUFB3
FAM126B
SMIM15
POLD1
NR1H2
SPTLC1
UBE3B
PISD
ST3GAL3
SNX8
SHANK3
PDCD6IP
RPL5
WASHC4
SMIM10L1
PRH1-TAS2R14
EIF2D
COL23A1
SEMA4B
TTC14
RARG
TRIP4
PCLAF
USP21
UFC1
FAM227B
DTWD1
DOK3
DDX41
TFDP1
CYP51A1
VAMP4
AP3S2
DENND4A
TOLLIP
POLR2J3
RBM28
NDUFS3
KBTBD4
FAM180B
C12orf66
MOGS
MRPL53
CCDC142
RAD51
MPHOSPH10
MCEE
EIF3CL
EIF3C
TNPO3
KIAA1958
C9orf147
PNP
PIP4P1
DUX4
DSTYK
MTIF2
GPN2
AASDH
BAZ1B
DYNC2I1
ESYT2
L3HYPDH
JKAMP
STRAP
FBXO22
EEF1AKMT3
METTL1
CYP27B1
THNSL1
POLG
HMGCR
XRCC6
DESI1
THG1L
PGBD2
ZNF408
ARHGAP1
ZNF687
STAT6
GNL2
TMED3
KTI12
LEO1
TAF10
RRP8
ILK
TPP1
GMNN
MRPL44
SLC52A3
SMDT1
PHETA2
NAGA
TRIM59
PPM1D
DIABLO
AKAP9
MTPN
LUZP6
EIF3E
P2RY2
AKR1A1
XPR1
VAMP1
TMEM88
NAA38
CYB5D1
MRPL45
CRYM
PDE4A
LUC7L2
TOR1AIP2
TOR1AIP1
REX1BD
SF3A3
HUS1
PAFAH1B2
XPOT
CUL5
SSBP1
OGDH
NBN
TTC4
PRC1
GOT2
STYXL1
WDR6
PPFIA3
LIN7B
C19orf73
MFAP3
FAM114A2
MRPS17
PRR22
MAP3K5
DUS3L
PRCP
DDIAS
KLHL12
NOP16
HIGD2A
C6orf226
RPS13
COX7C
GRPEL2
SAR1B
MRPL1
CYCS
SUGCT
MPLKIP
BORCS6
ZWILCH
SNAPC5
RPL4
TCAF1
ANO10
ABHD5
PPP3CA
MRPL48
TSFM
FNTB
ACYP2
SEPTIN2
HDLBP
KMT2E
NUP107
LARP4
FAM186A
MGAT1
MZF1
LSM5
AVL9
TNRC18
LOC100129484
STXBP3
OSGIN1
UGGT1
H2BC5
H1-4
ITFG2
PSME3
BECN1
AAAS
TLDC2
SLC12A9
MEST
C19orf33
TARBP2
NPFF
MAP3K12
KRT18
ZMYND15
MED11
CXCL16
NOP53
NDUFB2
GTPBP3
ANO8
TEKT2
ADPRS
EDEM2
HACD2
HEXA
ZNF394
ZKSCAN5
BORCS7
GOLPH3
FBXL13
ARMC10
PPIL3
NIF3L1
FIGNL1
CCT5
ATPSCKMT
TYW1
SBDS
SCAMP1
SLC24A1
INTS14
CDK5RAP1
TXN2
ADAM15
RAB27B
HPS5
GTF2H1
MRPL3
NACA
ASNS
SLC37A3
RAB19
PFDN5
MYG1
FRMD3
KCTD17
ATG9B
ABCB8
ATP5MC2
H4C5
H3C4
H2BC7
H2AC7
H4C4
MMADHC
PTPA
CRAT
UROS
BCCIP
MRPL42
KANSL1
PPIP5K2
GIN1
C12orf65
SWSAP1
GPD1
COX14
YEATS4
YARS2
PIK3R3
PPIL2
YIPF3
POLR1C
PMPCB
LRRC73
CEP83
FUT11
CHCHD1
MTRNR2L6
TSEN54
LLGL2
CASKIN2
DMAP1
GNG14
DHPS
MLF2
ZNF391
RFC4
MRPS36
WDR97
MAF1
CYC1
CDC42EP1
TSSC4
TARS3
VPS52
RPS18
B3GALT4
TCTEX1D4
PLK3
BTBD19
LGALS2
DPY19L4
ZNF165
OR1F12
MCCC1
UNC13B
AGK
EIF3J
CHST12
YTHDC1
SEH1L
ANO6
NHLRC1
BLOC1S2
ITGB3BP
EFCAB7
ZNF789
ATP5MF-PTCD1
ATP5MF
CBWD5
MALSU1
CBWD3
SECISBP2
CKS2
LTA4H
METTL7B
LRATD2
ZBTB45
SLC27A5
HAGH
FAHD1
NDUFAF1
MRPS31
AHCYL2
KCNIP2
DCPS
PLEKHM3
TIPARP
ELAC2
CCDC43
STOML2
PIGO
WDR4
LYSMD3
RAB5B
PMEL
CDK2
COL6A2
DCAF10
TDG
C12orf73
CBWD6
RPS27L
NRL
DCAF11
SLC25A28
INTS2
BCDIN3D
CLUH
MCRS1
TMBIM4
SIGMAR1
GALT
CCDC97
RPS6
POLR2J
MBTPS2
TPM3
IL11RA
BNIP2
SNX17
EIF2B4
SRGAP1
GARS1
SND1
TBC1D19
CHAC2
TATDN3
NSL1
PAIP2
CNOT2
DDX21
PSMD9
HPD
CASC3
SNRPE
SLC25A21
GPR35
ZNF212
MRM3
GLOD4
PDE7A
RNF111
CBX5
HNRNPA1
WDR70
NUP155
RAG1
GHITM
TRAF6
MRPL35
IMMT
FAM71E1
EMC10
TMEM251
MOAP1
ORC4
MBD5
YY1AP1
DAP3
TTC26
ZMPSTE24
DDX46
ASCC3
BLOC1S6
TMCO2
HNRNPU
RGS11
TAF5
CALU
PEX3
ADAT2
GABPB1
CCNB2
BBS9
FAM120B
GPN3
FAM216A
RAPGEF6
H2BC6
RBM6
CFAP298-TCP10L
CFAP298
DLG4
ACADVL
SLC11A2
B9D1
EID1
RNF14
SMPD1
KBTBD8
FGFR4
DRD4
PCID2
CUL4A
MRPS35
TMEM87A
GANC
NDUFAF2
ERCC8
SEC11A
UBE2K
MYLIP
SIRT6
ANKRD24
TMEM168
AQP5
RPS5
AQP6
MBD1
CXXC1
FIS1
THOC3
LPCAT4
COX18
POLR2J2
TSSK4
CLDN15
TPRA1
MCM2
PDIA3
TMCO6
NDUFA2
IK
TYW1B
MDP1
CHMP4A
TBK1
CD14
SMARCAL1
PSMC4
FANCA
PRKRIP1
RRN3
SLMAP
BMF
ATG5
NBPF12
MTHFS
NPM1
ZBTB3
PMF1-BGLAP
PMF1
TFPT
PRPF31
MYO19
GGNBP2
POLR2G
AK2
PIGW
USP8
TAF6L
NUP214
SLC25A13
ZCWPW2
AZI2
FAM168A
VIPR1
RPS26
ARHGEF19
TBC1D14
GET4
CCNC
CHCHD3
TRMO
ZNF250
CHMP7
CEP70
ATF2
PRLR
SORD
ZNF561
UQCRHL
COMMD1
CCT4
FAM185A
TOMM22
SLC10A7
RTF1
TMEM238
TMEM190
RPL28
RAD51AP1
C12orf4
SYCP2
PPP1R3D
FAM217B
USP30
WDR61
FAM133B
MRPS18C
HELQ
TRUB2
COQ4
PUS7L
IRAK4
EIF4A3
ZNF770
TRAPPC4
RPS25
PRPF8
NME1-NME2
NME1
RINT1
PUS7
GLCE
PAAF1
COA4
WDHD1
SOCS4
SRSF2
MFSD11
STT3B
NARF
CYBC1
TMEM209
SSMEM1
PCNP
ARIH1
PIGF
CRIPT
ERAP1
PARP2
INTS7
DTL
ADIPOR2
BRF2
ADSL
SLF1
KIAA0825
TFB1M
GSTM4
TSPAN31
CDK4
SCAND1
AGAP2
MARCHF9
ICE2
HECTD1
FANCD2
NUTM2E
LRRC57
HAUS2
BPHL
RPP25
STX18
GTPBP10
NUP42
GOLGA3
RFC5
H4C8
TRIM36
DNAJC19
CTSL
INO80
ANKRD13D
CRADD
NXT1
TRIM56
RASA1
NUDT1
MRM2
MAD1L1
TMEM230
PCNA
CDS2
SDHAF3
BRMS1L
DUS2
DPEP2NB
DDX28
CETN3
H3C13
H2BC18
H2BC4
H2AC6
HCFC2
GLT8D2
SLC25A17
OCIAD1
LIPH
TNS2
CNPY3
PPWD1
CENPK
FGD4
ZCWPW1
PPP1R35
MEPCE
OTULIN
NAV1
PARL
NDUFB7
ACY1
ABHD14B
ABHD14A-ACY1
ABHD14A
EFHD1
ATG4C
PSMD8
CCDC77
POP7
TMED5
CCDC18
KIAA1217
SUMF2
KDM5A
RASSF6
NOP2
CAP1
TAF13
FKBP9
PEX12
AP2B1
ZDHHC17
IPP
NUDT15
RPS15A
RPRD1A
PTPN23
PKD1L1
RPS3
MAP4K5
ATL1
THAP9
SEC31A
NAT10
SCFD1
SMIM4
NT5DC2
SCAMP2
ZBTB49
LYAR
TRUB1
CLSTN1
TMEM167B
PGAP2
CFAP43
DYNC2I2
FOXJ3
KNL1
KBTBD3
AASDHPPT
KAT7
PDIA4
COA1
CSDE1
CLDN4
NAA35
SCYL3
ZFC3H1
THAP2
METTL8
DCAF17
ESR2
TFRC
NR4A2
H4C9
H2BC12
H2AC12
GATM
SPATA5L1
NOL7
MVK
ZNF672
ZNF786
CMTR2
CCNT1
DTD2
RGL2
PFDN6
SDHD
SLC25A11
RNF167
PFN1
RIF1
TEDC2
DHRS4
ENO3
EXOSC10
NOP14
GRK4
PA2G4
FBXW7
TMEM267
KITLG
PLD6
THBS4
MTX3
EXO1
TBC1D9B
SERINC4
SERF2
HYPK
TRIP6
SRRT
THAP5
DNAJB9
SLC12A6
SRSF11
PLPBP
STYK1
RAB11A
YWHAE
NUTM1
NOP10
PPP2R5C
NAPRT
MROH6
PMVK
PLEKHF2
PNPLA8
EIF2S1
ATP6V1D
UNC50
COA5
PPA2
TMEM106B
PLPP5
CENPS-CORT
CENPS
P4HA1
SYNCRIP
HSD17B4
C6orf136
SLC1A3
POLB
LPAR5
KLHL18
KIF9
KRT8
SMG8
MICU2
RPL6
PTPN11
ZBTB6
RC3H2
MRPL24
PCLO
L2HGDH
DMAC2L
PSMD7
TRIM3
TIMM10B
ARFIP2
NIPA2
NOL12
JMY
ATP5F1A
ASH1L
MRPL16
CEP135
PRMT9
ZNF740
CSAD
AMD1
OGG1
CDK19
PWP1
MIF
ATG101
SMIM41
TMEM260
USP48
TET3
TARS1
CSE1L
ARHGAP18
TMED4
DDX56
ZC3H10
RPL41
ESYT1
SPRED1
C2CD2L
TMEM116
ERP29
LOC102724770
DGCR6
MAPK1IP1L
OARD1
NFYA
EIF4H
PBLD
HNRNPH3
APC
MRPS18B
ATAT1
C15orf61
YWHAG
CTH
GFM1
LEMD3
METTL2B
CYSTM1
MATN1
BCKDHB
ANAPC10
ABCE1
LCMT2
ADAL
RPP21
TIMM13
RPL39L
GINS3
PRR19
PAFAH1B3
ETNK1
DECR1
USP2
MAP2K1
GPT2
EVI5
C1QTNF5
C11orf65
LAG3
ILF3
SEC24A
MBD6
DDIT3
SETD4
CBR1
POLR2E
MFRP
GPX4
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
ADPGK
ISG20
LFNG
PRMT3
EPS8
RAD52
HEMK1
C3orf18
MRPS30
UTP20
SGK2
RHBDD1
TXNRD1
GTF3C4
DDX31
CHEK1
BCAT2
RNF13
FAM102A
OTUD7B
IVD
CCNI
SARNP
ORMDL2
IPO11
DIMT1
TNFAIP8