ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867216 | MCF-7
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◣ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

DUX4
MYO5C
FRG2C
FAM102A
PPP2R2C
SMARCD2
PLEKHB1
MYH14
SOX8
LMF1
ZNF217
FAM227B
DTWD1
ATG101
WWOX
LAD1
LYSMD2
TMOD2
LRATD2
PDE6A
PPDPF
MAPK6
NCOA3
DGLUCY
CNP
ANP32B
SAP30BP
RECQL5
KMT5B
ITGB8
KANK1
CLDN12
TRIM37
LZTS2
AMOTL2
BACE1
SMIM35
CENPP
HBP1
VTCN1
SLC38A2
MTF2
TMEM229B
SOWAHA
SHROOM1
MGLL
TUBD1
RPS6KB1
TREH
STX16
PAQR4
KREMEN2
TEDC1
FAM86B1
OTOGL
RPS29
LRR1
C8orf48
KPNA2
PI16
ARHGEF1
ART1
VPS37B
FGFR2
DPY19L4
MTSS2
ZNF3
COPS6
IFT46
ARCN1
RUBCNL
TRNP1
PSMD6
CYB5R2
PBX2
GPSM3
CYP2W1
COX19
B3GALT2
FRG2
HLF
TSPAN8
GATAD2B
RDH12
RDH11
TSC22D1
PDE8B
LRRC74A
ZFP3
VGLL4
EPYC
CDYL
UGT2B7
PLCE1
DHX36
FMO5
MBNL1
SORBS3
PXMP2
POLE
PCYT1A
SLC25A10
MRPL12
ZKSCAN1
RORC
C2CD4D
NIPAL4
HACD3
PRICKLE2
CADM1
PDXP
H3C6
H2BC8
H2AC8
PTPRA
ZNF24
MICAL2
TMEM167B
TAF13
BMP7
CDK2AP1
PAPSS1
DAB2IP
SLC33A1
PPP2R2B
BCL9L
FYN
PPP6R1
TMEM100
HR
EIF2D
NCALD
ARHGEF10
MCM7
AP4M1
MRPS18A
HSP90AB1
SLC35B2
NFKBIE
UXS1
NHLH1
HPS5
GTF2H1
CNDP1
PLEKHG4
DUSP6
PARD6B
ATP1B1
SPATA13
NFE2
LY6L
ACVR1B
HOXA3
HOXA4
CFAP70
MLKL
MTMR7
FMO1
SEC14L5
RTKN
MAT2A
TM4SF1
RPUSD3
DYNC1H1
TRPV4
POLR3E
RPH3A
CHST1
CLDN11
DCLRE1B
AP4B1
ZCCHC4
DNAJA4
RNF43
MPP7
KANSL3
FER1L5
PRR7
RHOB
FGD5
FAM222B
ZNF831
TRAF4
HMGB1
USPL1
LOC389199
MAP4K5
ATL1
LSMEM1
HDAC11
KRT23
SZT2
MED8
EML4
SRPK2
LMOD3
KIN
ATP5F1C
SERPINA1
KIF12
PFDN4
COL2A1
SH3YL1
ACP1
NOXO1
SYNGR3
GFER
TBL3
RPS3
SNORC
COL9A2
C18orf21
S100A10
SEC14L2
RNF215
ZNF180
SLC11A2
GPR25
OC90
TCP11
IL16
PADI2
MYADM
TSKU
PRDX1
FAM13C
GBA
PRORP
PPP2R3C
USP32
CTHRC1
FAM227A
CBY1
ATXN2L
GAS7
RBM43
USP8
TBC1D14
SPTB
E2F6
TBRG4
AP4E1
EHF
TMEM258
FEN1
CNPY2
SYT1
YWHAQ
MAP11
STAG3
GPC2
GAL3ST4
PDXDC1
GPR33
RIPOR3
REEP1
CNIH1
CLIP1
NREP
C20orf204
NOL4L
ATP8B2
PRKAB2
CHD1L
ZNF281
PALB2
DCTN5
LRRC63
MAPK1IP1L
PSMG2
EXOSC10
ANKRD35
SCAF8
SPIRE1
ZNF407
COL9A1
PMP2
ADGRL1
EMSY
PTCD1
CPSF4
COL21A1
PDHA1
SYT8
ADAM22
LMCD1
STARD13
FAM78B
N4BP3
RAB8B
TYRO3
SNX30
GABPB1
MMP17
CLTC
KRT19
KRT15
B4GALNT3
RHOC
PLA2G7
ATP6V1G3
LRRC37A3
EIF1AD
CST6
BANF1
HEATR5A
MARVELD1
OTUD7B
THEM4
THUMPD1
OTUD6B
RTL9
SLC25A24
HIPK1
ZNHIT1
PLOD3
PRRC2B
RUVBL1
EEFSEC
YLPM1
CA12
IL23A
SIVA1
FAM13A
ZBTB3
HEXIM2
BRIP1
PTGES3
PPP2R3B
TMEM170A
UBXN2A
VILL
MINAR1
CYP19A1
PCED1B
AMIGO2
TRIM50
FKBP6
SVIL
DNAJC14
BICRA
OR6C68
ARF6
CABP7
EFNA4
SRGAP1
TMCC2
PLD1
CRCP
PDE8A
MRPS23
PLD4
INO80C
FRAT1
ZNF787
CCP110
CNNM2
RNFT1
ITGB5
TEX50
SLC5A11
CSGALNACT1
BCAS4
BMT2
TPM4
KCNJ10
EIF3E
DCSTAMP
DSTYK
GLDN
HAO2
TBX2
PPP1R36
HSPA2
DERL1
MRPL22
GEMIN5
GRK5
RGMA
POLD4
INTS12
GSTCD
SSR3
FAM71D
RGR
LRIT1
ITPK1
APP
ZNF609
HAO1
TSTD2
NCBP1
SMIM6
KRCC1
AXIN2
NAP1L4
TADA1
ABTB2
ARHGAP19
TMBIM4
C19orf38
CCDC130
SEPTIN8
RTBDN
MAST1
HES1
STEAP2
ADSS2
DLGAP4
STRADA
FXYD3
FAM214A
NUP107
BTBD3
ZHX3
DDX42
CCDC47
CUEDC1
BCL2A1
ALDH3B1
NEDD4L
ATP11A
S100A13
S100A1
CHTOP
SMC4
IFT80
SOX6
LRP12
GAPDH
GLIPR1L1
CAPS2
PPM1D
ZNF775
SETD5
MAST2
ARHGAP18
LPCAT2
LRRC75B
GGT1
ARID2
ZNF883
PLEKHH1
ZP3
ATP6V0A2
REEP5
POR
TSC22D2
PEX3
ADAT2
LMNA
ZNF469
MEX3A
NME1-NME2
NME1
TSPAN14
CERS2
VAX1
SULF1
FBN3
SART1
TBC1D30
EFCAB2
FGA
BCHE
MYBL2
CORO2B
RAC1
CFDP1
VMP1
PTRH2
CALN1
MAFF
C11orf91
SEMA3B
NINJ1
C7orf31
TNRC18
LOC100129484
EAPP
FBXO32
SPEG
CEP97
GYG2
MIDEAS
KMT2A
SLC16A1
NEMF
ESYT2
SMARCB1
RASGRP3
SRGAP2C
FAM72B
RPL26L1
MOB4
PERP
CSDE1
SCRIB
PUF60
CTSE
ARHGAP39
PARP4
CHST11
ADCY8
OPA1
SYT7
PDE4DIP
CYTH1
UGT8
SORT1
NWD1
COX16
TAC4
PPME1
C2CD3
KLHL32
RAB17
MMP16
PRR16
FAM178B
TMEM177
SPP1
PRSS54
TINAGL1
SPTBN1
FAM20B
FGD4
C5orf15
ANKDD1B
FAM86B2
PLPP2
SPRING1
RNFT2
GTF2B
ROPN1B
TMX1
APPBP2
CAPS
DAAM1
VMAC
NDUFA11
SOSTDC1
MRPS31
PIM1
CEP85L
SCCPDH
CXCR4
TNNI3
DNAAF3
AKR1E2
SVOPL
HSD17B7
ERO1A
ANXA2R
ARHGEF12
FAM222A
NKX2-8
PCDH9
SMIM5
AMOTL1
IFI35
RPL27
METTL9
FZD6
ELF1
GPR158
EGFLAM
LY6H
INTS5
UQCC3
LBHD1
CSKMT
C11orf98
ACOT2
DEPDC1B
SLC35F1
PRELID3A
MAN2A2
INPP4B
ENPP2
CLRN1
POC1B-GALNT4
GALNT4
LHX9
NAV1
MKRN2OS
MKRN2
UNK
HMG20B
PDZRN3
DST
SRSF7
CD55
PIK3R1
ZG16B
HDGFL1
BTNL9
ANKRD39
DHRS11
RSAD1
CHAD
SF3B2
GAL3ST3
ZNF746
YY1AP1
DAP3
SLA2
LYRM1
DCUN1D3
DOCK8
NEDD4
MEF2C
ZNF296
GEMIN7
SIX6
HK3
USP3
MECP2
FGD3
DGKA
CFTR
CPA5
FGFR4
TINAG
SMARCD1
RHCE
MACO1
ADRM1
ANKRD10
FZD1
PLOD2
TMEM41A
PTP4A1
FUT10
TMED9
B4GALT7
ELK4
SLC25A45
FRMD8
SRF
NRAS
ZSCAN32
ZNF174
NPIPB9
IQSEC1
RPL32
SLC28A3
GIP
PHRF1
PCYOX1L
PRPF18
TRIM74
TRIM73
CTBP2
DICER1
PKM
CRBN
SORBS2
VEPH1
ERN1
MED12L
NPAS4
DECR1
LAMA4
IL13RA1
FLI1
ZBTB48
MAD2L1BP
GTPBP2
PCDH1
NSA2
GFM2
FAM204A
PLEC
SLC39A8
PARP10
PCMTD1
PKN1
FAM114A1
BMX
APOD
GFRA1
MAPK8IP1
AKIRIN1
MARCHF3
NDUFAF5
ESF1
SQLE
FAM104A
C17orf80
DNAI2
RMND5B
GALK2
RTEL1
USP15
CYRIB
PRKCD
CD244
KCNK18
DRAP1
C11orf68
PACSIN2
DDR1
KDSR
CAMSAP2
SLC39A13
KIF21A
IFNAR2
SYDE2
SGCE
PEG10
TYSND1
ELAPOR2
SPTAN1
HDHD3
INCENP
ADRB2
USP30
DRG2
SLC39A6
AFAP1L1
DTX3
ARHGEF25
MRPL21
IGHMBP2
TRIM2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TRIB1
RABGAP1L
PTGR2
SLC2A12
UCHL5
RO60
EPC2
STRBP
OSGIN2
SEMA3D
NUCB2
BCAS3
CTNNB1
CEP112
CGRRF1
CPEB1
MAST4
H4C9
H2BC12
H2AC12
NSFL1C
PHLDA3
COMP
TRIM33
GPR75-ASB3
GPR75
KHDC1
PSMC6
SCARB1
RNF169
GNAS
AMZ2
EIF4G3
ACTN4
ART4
TMPRSS7
NUDT9
SERPINA3
RAPGEF4
ZNRF3
MAP3K13
KIF22
GPRC5D
IGFBP7
C17orf67
KRT8
AOPEP
C1orf127
RAB4B
MIA
VCPKMT
CP
POMT2
GSTZ1
MRGPRX4
PKMYT1
MBP
COL23A1
TES
H2BC15
H2AC15
MRPL44
PPFIBP2
HEXB
DNAJB7
CDH26
POGZ
HAPLN2
BMP8B
STX18
CDKAL1
INSC
KIAA0754
PYGL
DCPS
CDH3
CIDEC
C3orf70
SPIN3
FAM149A
PWP2
LOC102724159
LEPROT
LEPR
NDUFAF6
NOTCH2NLC
ACOT4
ZNF488
RBBP5
RAB11B
CHD6
FAHD2A
NELFCD
HAPLN1
BMP5
WASF1
CDC40
RNF19A
HAUS5
CHAC2
SLC25A25
NAIF1
TACO1
LRIG1
ARHGAP21
RPL30
SMAD3
FNIP2
FDFT1
NOL11
SS18L1
PSMA7
PSMD1
PLEKHF2
ATP6V0E1
DKK3
SDK1
GTF2IRD2B
SLC44A1
ANK3
SPATA2
GNB2
NUDT2
KIF24
TPT1
BCAP29
ATP10B
PHACTR3
PLAC8
SLC38A8
EPB41L2
WDR11
PIK3C2B
CD99L2
TMC8
TMC6
CNOT6
AQP5
CDK12
AQP6
MRPL42
MED1
GPC5
CPPED1
ITGB3BP
EFCAB7
ADNP
RP9
TBXAS1
HIPK2
MAP2
OLAH
AURKAIP1
RBBP8NL
TRIP6
SRRT
CCDC88A
IRAK1
CLUAP1
GJB6
CALCR
IQSEC3
ARL14EP
MBNL2
CSTF1
AURKA
AGR2
CH25H
UCMA
CLDN9
RAB5B
PMEL
CDK2
SELENOI
ADGRF3
CLDN6
NAA35
TUBG1
RETREG3
TNFRSF12A
ZNF697
GRAMD1A
LOC100421372
HSPA14
CDNF
RFK
CA2
SLC50A1
EFNA1
ANKRD36C
PLA2G10
NPIPA3
NPIPA2
EREG
GMFB
THOP1
SGTA
HTRA2
DQX1
LOC105378979
AMFR
BRD4
RABGEF1
CEP120
PHAX
ALDH7A1
CELF1
RAP1A
RESF1
TRAF1
MNX1
ELF5
COA3
CNTD1
USP17L20
USP17L22
USP17L21
USP17L12
RHBDL1
RHOT2
URGCP
UBE2D4
AMOT
CALD1
TMEM64
ARL6IP1
ESRP1
DDX3X
ANO1
UBE3C
CNKSR3
LEO1
PPP6C
RGS9
TNKS2
IL25
CMTM5
TENT4B
SRI
FRMD6
STYXL1
RABL2B
TAF1L
SAR1A
IDI2
PI4K2A
TBC1D31
LMNB2
LIMCH1
HSPH1
RIPK2
ATP13A3
EHD3
CAPN14
MARCHF8
IMMP2L
RNF103
DMXL2
GALNT11
EEF1A1
PCDH8
KLHL21
B3GNT2
TAF11
ANKS1A
APC