ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220468 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◣ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

PAX8
TINAGL1
PKDCC
BCL9L
SH3KBP1
RORC
C2CD4D
ACSS1
SDF4
B3GALT6
C1QTNF12
PBX2
GPSM3
KLK6
KCNH8
NOXO1
SYNGR3
GFER
TBL3
MTF2
CDYL
KIF12
PPDPF
LAMB3
CCDC9B
UNKL
C16orf91
SLC35A5
ATG3
RBM7
C11orf71
LZTS2
LRRC75B
GGT1
HMX2
HMX3
SEMA3B
PDE8A
XRRA1
SPCS2
PLEKHB1
DAB2IP
PCDH1
TMEM63A
LEFTY1
TP53BP2
FRG2C
NOTCH1
SNAP29
PI4KA
RTKN
NRARP
CFDP1
MYH14
PSMD14
SOWAHA
ARHGEF1
ETNK1
TECR
DNAJB1
IL17RB
CHDH
HECTD2
LEPROT
LEPR
PLEKHG4
ECPAS
ITGA6
SPTBN1
TMEM168
FGFR2
RAB33B
CYP2W1
COX19
FRMD5
PNPO
PRR15L
MTBP
MRPL13
ZNHIT1
PLOD3
FRG2
TESC
TMPRSS3
RASEF
TRNP1
ZNF572
THOC1
RELA
SLC5A1
CNFN
E2F6
OTUB2
TMEM129
TACC3
SLBP
TRAPPC9
TNS2
ADAP1
IRF2BP2
ARHGEF19
STK32C
LRRC27
SCP2
ECHDC2
ATAD2
STXBP3
PPP6R1
FRMD7
TLE3
COL23A1
TAF15
POR
TTYH3
NBEAL2
CCDC12
RB1
OGA
FBN3
GCA
IFIH1
SSBP1
USP1
ERBB2
POLG
PRDX1
PIP4K2B
RHBDD3
EWSR1
FMN1
PELI1
CDC42EP3
SHF
LDHA
PPP4R3B
RAB4B
MIA
SYNGR4
KRT19
KRT15
SLC35E2B
SLA2
FOXA2
H3C6
H2BC8
H2AC8
RRBP1
UQCRQ
LEAP2
GDF9
SLC26A8
MAPK14
COBLL1
TMEM209
SSMEM1
XKR8
PARK7
TSKU
FGFR4
KANSL3
FER1L5
EFR3A
MCIDAS
CCNO
CDK12
OBP2B
ARHGEF17
VASP
ABTB2
WWP2
LSR
PTPRH
SEPTIN7
MIA3
SRCIN1
SUPT20H
RAD21
RAI1
ADAMTS9
GORASP2
AP3B1
IQCH
AAGAB
MYO19
GGNBP2
MRPL45
PIGW
LCN2
DDR1
KMT5B
PAQR4
KREMEN2
USP3
NCMAP
SC5D
PHYHIP
UTP23
NOL7
DUX4
NPL
DNAJA4
XPA
RTN3
ATL3
RPL26L1
CABP7
NUF2
RUNX1
SEPSECS
PDP1
ZNF385C
SDHC
MPZ
RNF139
KLF4
TES
STAT3
TMEM65
TNFRSF21
PBLD
HNRNPH3
ARHGEF5
SH3TC2
RGS3
NDST2
TATDN1
NDUFB9
LYPD3
PELATON
CPSF4L
LMO7
CCNI
ESCO1
RPS19
SOX8
LMF1
RABGEF1
ARHGEF38
LRRC6
ZBTB38
BICD2
PPP1CB
PLA2G2E
ZNRF3
SPATA20
ZNF862
EPN3
SMARCD2
CDC5L
GNB2
UIMC1
MRPS10
PSMD5
ACOT4
ARHGEF7
EIF1AD
CST6
BANF1
ZMPSTE24
TMCO2
FAM227B
DTWD1
TACSTD2
ZNF609
SMC4
IFT80
TNRC18
LOC100129484
MAT2A
LAMTOR5
C21orf91
PLPP2
TTC23L
IGSF10
TM2D3
LSG1
MDH1
WDPCP
SIPA1
KANSL2
SDHAF1
OTUD7B
MAN1A2
SPHK2
RPL18
FAM83E
SLC30A3
SKA3
MRPL57
TARS1
SHOC2
BBIP1
TSC1
GFI1B
MEF2A
WDFY2
ARL10
PAK4
MACC1
GATM
SPATA5L1
PFDN4
AP3S2
HBP1
RNF169
ARID3B
SPTBN4
HGS
ARL16
EIF4G2
DNAJC24
DCDC1
ARID2
NSFL1C
ERCC6L2
PPP1R12A
MRPL33
MYL12A
MYL12B
HMGB1
USPL1
SLC35B4
LENG9
CDC42EP5
WDR36
NANP
POP5
SFMBT1
PTDSS1
MTERF3
CYP2R1
ITGB3BP
EFCAB7
CLTC
ETV6
MTIF2
IREB2
EID1
SLC44A1
SRSF7
TBC1D30
WDR61
ZNFX1
G2E3
PRKCI
GIT2
ANKRD13A
NPNT
VMP1
PTRH2
RAB30
ZCWPW1
PPP1R35
MEPCE
ZNF425
ZNF398
RNF43
PGBD2
GBA
FAM133B
C17orf58
COMMD6
ADNP
ANKRD35
DDX52
C1orf74
RNF103-CHMP3
RMND5A
MRPS31
NF2
ZNF143
GSK3A
PTPN4
ZNF473
VRK3
CCS
CCDC87
RPL12
LRSAM1
ASCC1
ANAPC16
NPTN
PPP1R11
POLR1H
PSMC4
RNF39
ORC5
CYP2B6
WASL
CYRIB
MTERF1
ERCC5
TPP2
PTPN2
WEE1
MRPS33
CPSF6
FEZ2
USP15
OGDH
ACAP2
EFNA4
TRPV4
SSR3
MLEC
CCN2
SRP19
HNRNPA2B1
CBX3
LOC101928764
PLOD2
ERCC1
GPR15
CLDND1
LIN7C
PRR19
PAFAH1B3
CDCA7L
NECTIN3
EHBP1
TIAL1
AATF
LRATD2
GLIPR1L1
CAPS2
NOL11
ZBTB45
AAR2
TRIM28
ZCCHC4
SLC24A1
INTS14
SCAND1
KLHL7
CDADC1
ZNF189
MRPL50
IRF6
GALK2
COPS2
BTG1
CCDC97
DNAJC27
SNX5
MGME1
UBE2B
CDKL3
FZD1
WDR74
STX5
TBC1D31
KLF5
BTBD10
USP47
SPTY2D1
ZNF180
UBC
CCDC200
CLN5
RPS6
PRORP
PPP2R3C
USP48
ZNF576
IRGQ
PBX3
ZNF622
KPNA4
N4BP2L1
MYO5C
COMMD2
PYCR1
MAFG
TTC32
SIRT7
RPL27A
PRRT3
CCDC15
PPP1R9B
OSER1
PPIB
IQCE
BRAT1
ALDH3B1
EIF2AK3
RCL1
SERP1
EIF2A
OTULIN
MTHFR
CLCN6
FAM200B
TBPL1
CARNMT1
DENR
NCSTN
COPA
TRMT1L
SWT1
USP53
CCDC59
PON2
TRNAU1AP
ZNF777
SLC9B1
NDUFA5
NET1
STAT1
FRY
DIAPH3
OTOF
FAM166C
MRPS24
PPP5D1
CALM3
PRKAB2
CHD1L
NREP
TRIM29
CFAP20
POLR1F
CCNH
RPS7
UBE2I
WBP1
INO80B
STYK1
SNX17
EIF2B4
ZNF513
MVB12A
MSL2
TMEM126B
DLG2
NMI
MANBAL
ADPGK
MAST4
TMCC3
GTPBP10
LGALS8
ZBTB3
POLR2G
CEP120
PPIC
TAF6L
CDK11A
MIGA1
NDUFB4
INTS12
GSTCD
SLC50A1
EFNA1
PTPN13
MTA2
TUT1
PGM2L1
WFIKKN1
METTL26
TENT5A
SREK1
IPMK
CISD1
GTF2IRD2B
PRCP
DDIAS
SELENOH
CTR9
TTC13
ADSS2
RPS3A
CATSPERE
ALDH18A1
KLK7
STK38L
EIF3B
ZFAND3
PTMA
ELF1
RPL6
PTPN11
SRCAP
LOC730183
WBP4
EMSY
CEP63
ANAPC13
SREK1IP1
CWC27
PARP4
ARID1A
MGAT4B
SQSTM1
FAM98B
PIGF
CRIPT
PRKAR2A
KIF5B
EXOC6B
WASHC5
NSMCE2
BAZ1B
RPL22L1
CD2BP2
CHD2
STRIP2
ECT2
SNX1
CIAO2A
PLEKHA1
SMARCA5
SMC3
DNAJC14
ARL14EP
XAB2
STXBP2
PCP2
ACYP2
SMIM12
AGBL3
FAM91A1
CALM2
POC1A
TFPT
PRPF31
SMARCAL1
PLEKHF2
RABGAP1
ETFA
GSDMD
ZBTB26
SOWAHC
SEPTIN10
EFCAB2
SRP9
NCOA5
CNBP
HSD17B12
RPS13
RNF135
PMPCA
ENTR1
SLC35E2A
CHCHD3
PTK2
SLC39A8
DYNLRB1
OXR1
NUDT16
SERPINI1
PDCD10
SECISBP2
CKS2
CEP135
EHD4
HILPDA
DOCK9
RAB10
JAG1
FNDC3A
FRAT2
PTOV1
SHKBP1
NUP107
ATF7-NPFF
ATF7
CYP51A1
C19orf48
MRPS18C
HELQ
ZNF644
DNAJC25-GNG10
DNAJC25
SPTLC1
API5
NCAPG
DCBLD2
ITGB6
TMEM260
STX18
MTIF3
NUP54
WDR93
PEX11A
HES6
METTL2B
MATR3
POT1
KIFAP3
RALA
RPN2
MROH8
CD55
COL9A3
ZNF25
COG7
SLC30A6
LIPG
ANAPC4
PRPF38A
ORC1
RNF32
NECTIN2
BCL6
PRR25
GNG13
TTC30B
SCAF11
DIABLO
SPATA9
RHOBTB3
THAP10
LRRC49
NMT1
DCAKD
MFSD14A
RBM12
CPNE1
MSANTD4
TTC26
ITPKC
COQ8B
LDHB
SVIP
NEPRO
DPH5
XRCC5
MUC3A
PPP1R13L
POLR1G
TRMT2A
RANBP1
ZBTB37
FANCI
NSA2
GFM2
FZD6
PPME1
C2CD3
LRRC58
UBQLN4
LAMTOR2
TGFBRAP1
PSMA1
DCT
SMYD3
C2orf49
CCZ1B
CLDN9
NUP42
CLDN6
DCP1B
NUB1
UROS
BCCIP
PDIA4
SZT2
MED8
METTL9
TMEM222
MICU2
CCNL1
RPL5
ZDHHC24
ACTN3
CDK13
THADA
JRKL
CCDC82
SEC22A
MAL2
CLCF1
LYPLAL1
WDR75
FBXO48
APLF
UBR7
GON7
SPACA9
AK8
ATG101
PDXDC1
SMIM41
TRIB1
PEX12
AP2B1
ZNHIT2
ZNF584
TAF10
RRP8
ILK
FAU
IFRD1
TPP1
ABCF1
COG6
KCNJ14
GRWD1
C4orf36
PRPF4
PRKN
PACRG
CDC26
FAM228B
SLC25A32
DCAF13
NUDCD1
PFN4
CHPF2
ABCF2
RTN4
EREG
NOP58
STX16
C6orf62
PSPH
CCT6A
PLD3
C19orf47
PIGBOS1
PIGB
GPR160
GSPT1
APBB2
UFM1
H2BC15
H2AC15
RNF6
RWDD1
VIRMA
CCNB2
GARS1
H4C12
H4C11
RNF103
IKBIP
APAF1
MRPS18B
ATAT1
VAC14
ELL2
HLA-DMA
ARNTL
TMBIM4
MRPL40
HIRA
FAM110A
ZBTB20
MMAA
GSTO2
EEF1AKMT1
HERC1
RAB3C
GFM1
FAM76B
CEP57
INTS13
FGFR1OP2
SRSF3
FPGS
WWOX
UCHL3
UQCRC2
RPS11
RPL13A
PCNX3
MAP3K11
PDE4DIP
EIF2AK1
NUDCD3
XPO1
MED4
EIF4A2
TRAK2
STRADB
PPIL2
TRA2B
COPG1
SLC39A10
ZNRF2
PIBF1
DIS3
DUSP10
EMC2
CEP126
ANGPTL5
IGF2BP3
TSPAN31
CDK4
ZBTB11
AMN1
MARCHF9
RPL24
TBRG1
TMEM126A
FAM53C
CDC25C
WDR11
CYTH2
TMEM41A
LEKR1
RTTN
THAP5
HSPA5
DNAJB9
PLEKHA8
EFHC1
SECISBP2L
MET
UGDH
UBB
ZNF268
NDFIP2
DNTTIP2
MYNN
ACTRT3
TRIP6
SRRT
UTP3
KRIT1
ANKIB1
SAP18
SRP14
MYO1G
TSG101
IRX2
C5orf38
SPRED1
MOB4
MTHFD2L
ZNF672
WDHD1
SOCS4
KCTD12
CCNG2
SPDL1
CMC2
CENPN
LANCL2
MRPS23
EHF
CROT
C8orf76
FDXACB1
C11orf1
ALG9
MED30
LFNG
NXF1
LOC100287896
LIPT2
DESI2
SHOX2
THAP6
NUP205
RSRC1
PDK1
TOMM7
DNAAF2
NHLRC2
DCLRE1A
TAGLN2
UBN2
AMOTL2
PPM1D
CDK8
ZNF764
BORCS6
UEVLD
ZC3H15
RNF115
POLR3C
TTC8
SPAG5
STPG2
TMEM242
ZNF335
RBBP6
COX18
LINS1
ASB7
MAGOHB
RBL1
LRRK1
NAT10
FAM3C
MTMR6
SLC25A28
SYS1
ARNT
GSK3B
C15orf40
TBC1D23
ZHX2
PTRHD1
CENPO
PAK1IP1
C6orf52
MRPL17
LACC1