ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867217 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◣ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

DUX4
MYO5C
ZNF217
PPP2R2C
FRG2C
PLEKHB1
PDE6A
SMARCD2
FAM102A
DGLUCY
NCOA3
MYH14
ATG101
LRATD2
MAPK6
FAM227B
DTWD1
AMOTL2
SOX8
LMF1
CNP
WWOX
PPDPF
SAP30BP
RECQL5
LYSMD2
CLDN12
KPNA2
KANK1
TMOD2
UGT2B7
PFDN4
OTOGL
TSC22D1
PAQR4
KREMEN2
SORBS3
ANP32B
VTCN1
HSP90AB1
SLC35B2
NFKBIE
NHLH1
ART1
SMIM35
MTF2
RPS29
LRR1
SLC38A2
RUBCNL
MTSS2
UXS1
FYN
ARHGEF1
DUSP6
LAD1
VPS37B
ITGB8
FMO5
DNAJA4
RNF43
RDH12
RDH11
TUBD1
RPS6KB1
TRIM37
SOWAHA
SHROOM1
HLF
LZTS2
POR
MBNL1
PSMD6
PRR7
PARD6B
B3GALT2
KMT5B
DAB2IP
STX16
TMBIM4
ZKSCAN1
PRICKLE2
RTKN
TRNP1
PPP2R2B
FRG2
CDK2AP1
HBP1
TMEM258
FEN1
VGLL4
HAO2
PCYT1A
PLCE1
RPS3
TEDC1
FGD5
ZNF3
COPS6
CALN1
CENPP
ZFP3
BTBD3
ARHGAP39
TSKU
TMEM167B
FAM86B1
TAF13
RORC
C2CD4D
ZNF831
TREH
PRORP
PPP2R3C
TSPAN8
PXMP2
POLE
PDE8B
PBX2
GPSM3
HACD3
BACE1
THUMPD1
KCNJ10
FMO1
SPTB
MGLL
CA12
SPATA13
HR
LMCD1
PRR16
IFT46
ARCN1
MTMR7
HDHD3
FGFR2
DHX36
BMP7
NFE2
TRPV4
MAP4K5
ATL1
SLC25A24
DCLRE1B
AP4B1
GLDN
TBRG4
LY6L
SLC35F1
ZCCHC4
CD55
NIPAL4
ATXN2L
CLDN11
TMEM229B
SEMA3B
SNX30
EMSY
ZHX3
NREP
SYT1
FAM71D
CNNM2
FAM222B
CYP2W1
COX19
KRT19
KRT15
S100A10
FGD3
LAMA4
ABCA5
PTPRA
DRAP1
C11orf68
LMNB2
RPUSD3
COL9A1
CFAP70
TEX50
CDYL
C19orf38
TBX2
PSMG2
TCP11
CTHRC1
CNIH1
SPIRE1
BCL9L
PPP6R1
N4BP3
ZBTB3
DPY19L4
TM4SF1
CCDC130
SLC5A11
TRAF4
EIF4G3
STX18
C8orf48
ZNF180
ACVR1B
PAPSS1
SZT2
MED8
BTNL9
SRPK2
HEATR5A
CYB5R2
TMEM94
CNPY2
AQP5
AQP6
IGFBP7
TRIM2
VILL
MAP11
HEXIM2
STAG3
GPC2
GAL3ST4
CNDP1
GATAD2B
CEP97
PCED1B
AMIGO2
CDH26
SLC25A10
MRPL12
MYADM
LMNA
MEX3A
SART1
ARHGAP27
PSMD1
SEC14L5
PDXP
MECP2
ELK4
GPR33
USP32
ZP3
IL16
NCALD
SMIM5
NOCT
GLIPR1L1
CAPS2
CIPC
ZNF609
CHST1
ACOT2
RHOC
RIPOR3
AP4E1
MEF2C
H2BC15
H2AC15
PROX2
YWHAQ
KANSL3
FER1L5
ZNF281
PDXDC1
GPR25
PLEKHG4
ZNF24
MCM7
AP4M1
FAM227A
CBY1
HPS5
GTF2H1
INSC
LMOD3
CSDE1
RMND5B
VMP1
PTRH2
CADM1
KMT2A
MYH11
FXYD3
LCP1
SLC33A1
RNFT1
ZNF407
DGKA
KIF12
EPYC
ATP1B1
PCDH9
ANKDD1B
HMGB1
USPL1
E2F6
PRRC2B
TBC1D14
INTS5
UQCC3
LBHD1
CSKMT
C11orf98
CLIP1
WWP1
MAST2
DHRS11
RPH3A
MMP17
FAM178B
TMEM100
TBC1D30
FAM13C
TRIM50
FKBP6
NWD1
CRYM
PPFIBP2
TAF11
ANKS1A
PCDH1
ARHGEF12
KIN
ATP5F1C
SVOPL
ATP6V1G3
KRT23
EIF2D
LSMEM1
RAB8B
MAT2A
TNRC18
LOC100129484
SSBP1
MAST4
PTCD1
CPSF4
OR6C68
SERPINA1
MPP7
NRAS
CUEDC1
PRKCD
HMG20B
KRT16
SLC35E2A
EFNA4
SULF1
SLC6A9
PLA2G7
PTGES3
SGCE
PEG10
SLC11A2
EML4
PMP2
UBXN2A
TMEM262
BSPRY
ARHGEF10
HDAC11
COL2A1
C20orf204
TRIM33
USP15
TMCC2
TYSND1
PHLDA3
SELENOI
ADGRF3
GAS7
TMEM177
NOXO1
SYNGR3
GFER
SYT7
LRRC74A
SYCP2
PPP1R3D
FAM217B
RHOB
SCCPDH
LRRC75B
GGT1
SMC4
IFT80
KDM3A
S1PR2
CFDP1
NOL4L
CNOT6
TMEM129
TACC3
ROPN1B
ABTB2
HOXA3
PI16
HOXA4
SOX6
TMEM170A
DLGAP4
LRRC63
COMP
PERP
PIM1
PTP4A1
FGA
SLC27A1
SCRT1
DGAT1
MINAR1
EPC2
SORT1
CEP112
SCAF8
WWTR1
DCSTAMP
SNX31
NINJ1
ETV4
THEM4
GYG2
H3C6
H2BC8
H2AC8
MED23
ENPP3
C18orf21
LOC389199
SEC14L2
RNF215
OTUD7B
BICRA
EHF
WDR53
FBXO45
VARS2
GTF2H4
POU2F1
LCE2A
STARD13
RBBP5
NME1-NME2
NME1
PLD4
INTS12
GSTCD
ASPM
ZBTB48
RPL26L1
COL9A2
HSD17B7
YLPM1
RPL32
SUOX
KLHL32
CP
OTOA
RUVBL1
SLC44A1
EEFSEC
SPEG
RABGAP1L
BMT2
CPM
REEP1
APPBP2
FAM86B2
DSC2
FGFR4
KDSR
SIX6
B4GALNT1
ABCC5
UPF3A
OGA
FAM20B
SLC25A45
FRMD8
CHST11
INPP4B
AGR2
YY1AP1
DAP3
PRDX1
ARL6IP1
MKRN2OS
MKRN2
ZNF787
ERO1A
ASB14
PPIB
MICAL2
FBXO32
DDR1
ECH1
CFTR
AFAP1L1
PDE4D
KRT76
KRT3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ANKRD35
RSAD1
CHAD
PPP1R36
HSPA2
SELENOW
SFXN5
DEPDC1B
ST3GAL4
GRK5
MIDEAS
HDDC2
DCPS
IQSEC1
LOC100505841
DERL1
CFAP20
RNF103
SMIM6
LOC105378979
EXOSC10
SCRIB
SRGAP1
MRPL22
GEMIN5
PIK3R1
PUF60
ANK3
SPP1
AKIRIN1
RNF19A
CYTH1
PRUNE1
MINDY1
TNKS2
ACSS3
SVIL
KRCC1
NEMF
NELFCD
VIRMA
ZNF277
DOCK4
CTNNB1
GBA
STRADA
SNORC
RGMA
SEPTIN8
DAAM1
EEF1A1
MFSD2B
KDM7A
FRAT1
MRPL21
IGHMBP2
AKR1E2
TPK1
HK3
SPATA2
PRKAR2B
WASF1
CDC40
USP8
SYT8
POC1B-GALNT4
GALNT4
NFIB
NEDD4
UGT8
FAM104A
C17orf80
PKN1
CABP7
LEPROT
LEPR
ANKRD10
SIVA1
PPME1
C2CD3
PLEC
ARF6
PARP10
MMP16
CDH3
GKN1
RPS7
MLKL
POMT2
GSTZ1
ITGB4
PAM16
FAM78B
COL21A1
EIF2AK1
RBM18
MRRF
AXIN2
NDUFAF6
SRP19
DST
PCYOX1L
DKK3
EIF3B
USP3
CGRRF1
TEX14
RAD51C
TBXAS1
HIPK2
MRPL40
HIRA
TSTD2
NCBP1
ANKS4B
ALDH3B1
KMT2E
HACL1
BTD
SLIRP
ALKBH1
PLOD2
PPP2R3B
NT5C3A
IFI35
RPL27
TACO1
ZDHHC17
RASGRP3
RAB4A
IRAK1
RAPGEF1
GOLGA6C
MYL12A
ARID2
TYRO3
DMXL2
ART4
MYL12B
HIPK1
SLC39A8
OC90
RPL30
ATXN7
DNAJC14
BRIP1
CYP24A1
MRPS18A
BCAS4
NEDD4L
TBX4
SBNO1
VTI1B
CDCP1
ELMO1
DSTYK
NCSTN
COPA
CORO2B
TRAF1
PREX1
CLCN3
MARCHF8
GPRC5D
NEK1
RABGEF1
MARVELD1
LTBP1
MYEF2
CTXN2
AURKAIP1
NQO2
SH3YL1
ACP1
GALK2
PADI2
TRIM16L
POGZ
BACH1
SLAIN1
GABPB1
GALNT11
GPR75-ASB3
GPR75
IQGAP1
TNNI3
DNAAF3
LHX9
CTDSP2
BARHL1
PAN3
HNRNPH1
GPR89B
FAT1
CAV2
ABCB4
BCAS3
BNIP1
B4GALNT3
LIMCH1
NUCKS1
ARHGAP21
CFAP100
NKX2-8
TAF1C
TENT5D
LHFPL6
PI4K2A
KLF10
RAB17
CD244
LIME1
SLC2A9
PPM1D
EFCAB2
SLC16A1
BCL2A1
AOPEP
TSC22D2
GPC3
LCK
FAM167B
COMMD2
CALU
POLR2J3
PRKAB2
CHD1L
NPIPB9
TPT1
ARL8B
CIDEC
ADAT1
RNF169
SRF
NOTCH2NLA
NRCAM
KIF21A
PKIB
C11orf91
TAC4
TRIM74
TRIM73
CPLX2
ATP2B1
NAP1L4
DECR1
RPIA
PEMT
NFATC2
RHOJ
TBC1D31
ATP5MC2
CPA5
MAD2L1BP
GTPBP2
CLUAP1
AMOT
RNF144A
OPA1
DRG2
HAO1
GNAS
RESF1
THAP12
GVQW3
ZNF444
PHRF1
PRKCI
MRPS31
NUDT2
KIF24
HMGCR
S100A13
S100A1
CHTOP
UNK
NACA
BPTF
FAM207A
BTN3A1
RAB33B
SRSF7
SPAG1
POLR2K
MED9
TMOD1
RNF122
C10orf67
TMX1
PLA2G10
NPIPA3
NPIPA2
IDI2
LTBP2
WDR11
TIAL1
CEP85L
SLC28A3
IFNAR2
PARN
BFAR
CA6
RNASEH2A
PRDX2
PRKDC
MCM4
TRIP6
SRRT
MARCHF3
NDUFAF5
ESF1
TADA1
MAFF
RAP1A
SLC2A13
AMOTL1
ACP7
MYBL2
DYNC2I1
ZC3H3
KHDC1
RCN2
EIF3E
SLC50A1
EFNA1
TUBA1B
RTL9
PRTFDC1
MGRN1
CLTC
TSPAN14
ADCY8
MAP2
TECTB
PROKR1
DKC1
ZNF775
SETD5
TESK2
MMACHC
CCDC163
LRRC37A3
CELF1
ZNF488
CCAR1
SPTBN1
ARNTL
CDIPT
OTUD6B
SMAD3
NPY4R
NANOS2
ARHGAP19
SPRYD3
ADSS2
METTL15
KIF18A
SMARCB1
PARP1
NPC1
LRRC70
MAP7D3
PELI1
SMG8
SLC39A6
RASA1
IGF2BP2
TRNT1
ATP13A3
ZFHX3
EAPP
ZNF484
HUS1
HERPUD2
CSGALNACT1
GPC5
CLASP1
HK2
GNB2
KRT8
ELF1
WIZ
SPATA9
RHOBTB3
PLD1
USF3
NDUFAB1
C5orf15
VAPB
FAM214A
RBM4B
TEN1
ACOX1
PEX3
ADAT2
BRWD1
HSPB9
GTF2H2
GTF2H2C_2
FZD1
POLR3E
TPM4
KLK14
NBEAL2
CCDC12
RHBDL1
NSFL1C
RHOT2
UBE3C
TBC1D12
SDC4
IL13RA1
SFXN1
PLCL2
DCUN1D1
DENND2C
TOM1
MRPL44
RBBP8NL
VCPKMT
ITPK1
CCDC146
OAZ3
MRPL9
RMDN1
CPNE3
ARL4C
VGLL1
LRCH1
ETNK1
NOL11
COPS4
PARP4
CLDN4
CDK5RAP3
SNX11
CBX1
ATP10B
GNS
STAP1
CYB561
NUCB2
COBLL1
ZBTB10
UBE2N
MRGPRX3
TOP1MT
RHPN1
GSTA4
PCCB
CERS2
PFKFB4
IL17F
RASAL2
LSR
SRGAP2C
FAM72B
SLC35B1
MRGPRX4
IL25
CMTM5
CARM1
SRGAP2
FAM72A
SSR3
NOTCH2
BBS1
CYP19A1
LOC100421372
HSPA14
CDNF
FABP1
SCIN
SLC24A1
INTS14
NHP2
PRRT2
MAZ
TAF1L
FAM90A1
CNFN
ZNHIT1
PLOD3
SEPTIN9
MBNL2
EIF2S1
ATP6V1D
RBM43
GJB6
SNX6