ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220467 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◣ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

PAX8
BCL9L
PKDCC
TINAGL1
RORC
C2CD4D
NOXO1
SYNGR3
GFER
TBL3
CDYL
SH3KBP1
LRRC75B
GGT1
PBX2
GPSM3
DAB2IP
KLK6
PCDH1
SLC35A5
ATG3
NOTCH1
SOWAHA
KIF12
LZTS2
PPDPF
SDF4
B3GALT6
C1QTNF12
TMEM63A
LEFTY1
LAMB3
TECR
DNAJB1
WWP2
SLC5A1
SEMA3B
CYP2W1
COX19
RBM7
C11orf71
PNPO
PRR15L
ETNK1
MTF2
PLEKHB1
TP53BP2
TESC
KCNH8
SNAP29
PI4KA
FRMD5
PLEKHG4
UNKL
C16orf91
IL17RB
CHDH
TRNP1
CFDP1
TNS2
RELA
PDE8A
XRRA1
SPCS2
TMPRSS3
SLA2
IRF2BP2
CYP2R1
SPTBN1
ADAP1
PSMD14
MTBP
MRPL13
ACSS1
THOC1
SYNGR4
HECTD2
HMX2
HMX3
XPA
ECPAS
VASP
SHF
SPTBN4
CABP7
ALDH3B1
SEPTIN9
ODC1
CNFN
TNRC18
LOC100129484
ANXA2
TSKU
RB1
PELI1
PLPP2
RASEF
EFR3A
NWD1
RABGEF1
ZNF609
RAB33B
FOXA2
STXBP3
DUX4
TMEM129
TACC3
SLBP
TTYH3
H3C6
H2BC8
H2AC8
LEPROT
LEPR
ITGA6
ETV4
FBN3
STK32C
LRRC27
PELATON
DENR
FMN1
ZNHIT1
PLOD3
NPL
MACC1
NRARP
KIAA0895
SCP2
ECHDC2
ANLN
NCMAP
FRMD7
FRG2C
ZFP36L2
PAQR4
KREMEN2
SPATA20
EPN3
OBP2B
LSR
FGFR2
FGFR4
IGSF10
PROM1
ARHGEF19
ZNF862
ATAD2
POLG
ARHGEF38
SIPA1
CCDC9B
CLIP2
OGA
FRG2
ARHGEF1
MYO19
GGNBP2
PIGW
DNAJA4
TLE3
EFNA4
BICD2
NQO1
SDHAF1
TTC30B
FRY
NFE2
SH3TC2
ARHGEF10L
RTKN
TES
XKR8
ZNF572
TRIM47
USP3
NBEAL2
CCDC12
STARD3
PPP1R1B
ACAP2
ZNRF3
CPSF4L
NPNT
SOX8
LMF1
LY6L
TMCC3
LDHA
CAPN12
SUPT20H
TRIM29
MAN1A2
SDHC
MPZ
PDP1
POR
BCL2L1
CUEDC1
SHOC2
BBIP1
DIXDC1
RAB4B
MIA
GNG8
SMC4
IFT80
MYH14
CLDN3
TP53INP2
SETX
PLOD2
PTK2
UBAP2
CAVIN1
TBC1D14
ETV6
LYPD3
PHPT1
MAMDC4
AJM1
ZFAND4
SLC26A8
MAPK14
PAQR6
BGLAP
SMYD3
RNF169
TMEM168
FOXO1
ADAMTS9
RUNX1
AAR2
CCN2
TACSTD2
RCC2
SLC16A3
BTG1
DTNB
COA1
ZNF473
VRK3
DNAJC14
MET
ZBTB38
ZSCAN2
UTP23
NF2
FZD6
GATM
SPATA5L1
MVB12A
COBLL1
RASAL1
CFAP73
FURIN
TYMP
SCO2
ODF3B
COL23A1
LRATD2
CALR
OTUB2
FARSA
RAD23A
TTC23L
ZNF385C
PPIC
NCOA5
PPP6R1
TMEM209
SSMEM1
IQCH
AAGAB
LIMCH1
FAM91A1
C17orf58
MICALL1
GLIPR1L1
CAPS2
ABTB2
RRBP1
FAM227B
DTWD1
SLC35E2B
RTN4RL2
XAB2
STXBP2
PCP2
PIGBOS1
PIGB
LHPP
LIPG
CRY1
CDC42BPG
PLA2G2E
FNDC3A
KRT19
KRT15
DOCK9
TRAPPC9
SLC35B4
MRPS10
ABCD3
LMO7
SMARCD2
BRSK2
PRRT3
TATDN1
NDUFB9
NDUFB2
CCSAP
UGGT2
FOXC1
WDR93
PEX11A
TUBGCP5
BCL2L11
PARK7
RTN3
ATL3
NECTIN1
FBLIM1
PFDN4
PIP4K2B
SLC44A1
GBA
OGT
USP15
PAIP2B
SBF2
MCIDAS
WDR61
FSIP1
CCNO
CALM2
DBP
CA11
ALOX5
SLC35E2A
PTPRH
SPATA9
RHOBTB3
ZCCHC4
MRPS31
APBB2
IKBIP
APAF1
KANSL3
FER1L5
PBX3
PPP1R9B
LZTS3
SHKBP1
FKBP5
RNF135
NCAPG
ARHGEF17
HSPA6
CACNA1S
ASCL5
MEMO1
CCDC93
KMT5B
FOSL1
CCDC85B
SRP14
BBS9
FAM228B
PFN4
POP5
NME4
DECR2
E2F6
PTEN
KLLN
CCNI
RGS3
ERCC6L2
TBC1D30
THBS1
ARNTL
PSMD5
HILPDA
KCTD12
ZNF180
CHSY1
PRKAR2A
RPS29
LRR1
SRCIN1
ZNF264
RPL26L1
FST
NUP85
SLC50A1
EFNA1
GOLGA6L10
EIF1AD
CST6
BANF1
PRR25
GNG13
OTULINL
AMMECR1L
COMMD6
HGS
ARL16
BCL11B
FZD1
PTMA
NOL7
SLC4A8
NIPBL
GALNT6
IFT81
PRDX1
MITD1
GLCCI1
BTBD10
VRK2
MIA3
ZNF207
C17orf75
TMEM65
UROS
BCCIP
ARHGEF5
RPS19
PGBD2
DARS1
RPS11
RPL13A
HSCB
CHEK2
FCHSD2
RALGAPB
EEF1AKMT2
ABRAXAS2
GLI2
TESK2
MMACHC
CCDC163
RBM48
PEX1
KLF4
ERCC5
HMGB1
GOLGA6L3
CD2BP2
MSANTD4
RHBDD3
EWSR1
SSBP1
SLC45A4
CDK12
SCOC
POGLUT2
BIVM-ERCC5
BIVM
USP47
TAF15
ARID2
CLDN4
PPP1CB
CCNF
TTC30A
UFD1
CDC45
RHBDL1
STUB1
JMJD8
VSIG8
CROT
TARS1
SLC27A1
RABGAP1
CEP152
ZBTB26
CCND1
JAG1
PPP5D1
CALM3
PRR7
DNAJC27
FAM200B
RRAS2
EPOP
NOTCH2NLC
TGDS
GPR180
LFNG
USPL1
CA12
TRMT2A
RANBP1
TTC32
FAF1
CDKN2C
FNDC3B
COPG1
SFMBT1
SF3A2
PLEKHJ1
ABRAXAS1
IFIT5
CDC42EP3
HNRNPA2B1
CBX3
TTC14
ELL2
CCNL1
NMI
USP48
MINDY2
CDADC1
AHCYL2
RBM34
AP3S2
PLS1
S100A2
TREM1
PRCP
DDIAS
WASHC5
NSMCE2
UBALD2
PHF5A
ACO2
AQP5
FGFBP3
SLC25A36
AQP2
MYL12A
C21orf91
PLA2G7
PTDSS1
MTERF3
RUBCNL
INTS12
GSTCD
RCL1
RPL27A
DYNC2I1
C8orf76
USP1
DENND3
LDHB
SKA3
MRPL57
UBR7
GON7
ZNF584
RNF225
AMACR
PRB1
HNMT
MUC3A
MRPL40
HIRA
HYLS1
ZNF614
TXNDC9
EIF5B
SLC39A10
ZC3H8
RBCK1
ARHGEF7
VMP1
PTRH2
COL9A2
MDH1
WDPCP
MYH9
SCYL3
PHLPP1
LIN54
PCNX3
MAP3K11
FBXO47
TBC1D31
MTHFD2L
PCNP
SLC2A13
CCS
CCDC87
DNAJC3
FUT7
C9orf139
ABCA2
RNF103-CHMP3
RMND5A
ZFAND3
PTPN13
PTPN4
PPIB
PGM2L1
ITGB3BP
EFCAB7
NREP
DDR1
WDFY2
TMEM71
PHF20L1
LCN2
MRPS30
IQCC
DCDC2B
CCDC28B
IL1RN
ZBTB3
POLR2G
ARID1A
TAF6L
SORT1
NUP107
PPM1D
ZNF143
SECISBP2
CKS2
TIPIN
BORCS6
MECR
PPL
PTPRU
CFAP65
EXOC6B
TRIM62
NOL11
IFRD1
ROPN1
UBE2I
ZNF195
SEPSECS
QTRT2
CCDC191
PRR19
PAFAH1B3
INO80C
ATF4
ZBTB40
WDR27
C6orf120
RNF130
DPY19L3
TNNI3
DNAAF3
UCHL3
PYCR1
MAFG
SYT7
SIRT7
FAM131B
ROCK2
RIPK4
PLEKHA8
SERTAD3
STARD4
ASPH
RANBP9
NHLRC2
DCLRE1A
PGLS
EED
UCHL5
RO60
RINT1
PUS7
KMT2B
CCDC7
GDF5
CEP250
EHHADH
FKBP9
GORASP2
ZDHHC24
ACTN3
LSM8
BCAR3
PYROXD1
TOE1
MUTYH
GNB2
KRT8
KLHL7
MED4
FAHD2A
TMSB4X
H2BC15
H2AC15
SETDB2
CAB39L
H4C12
H4C11
IRX2
C5orf38
MATN1
ACOT11
PRKCI
SNX17
EIF2B4
ZNF513
GGCT
SLC23A1
DSCC1
THADA
NANP
PROB1
YTHDF3
MZB1
ADGRG1
LY75-CD302
LY75
DIAPH3
MRPL3
GRAMD2B
CARNMT1
IGFL4
LOC107984974
FAM83D
SERPINA1
SPHK2
RPL18
FAM83E
STARD7
ZNF76
ASXL1
PRDM8
CHD2
FRG1
GSK3B
SPACA9
AK8
GALK2
EMSY
COPS2
SELENOT
PDRG1
NFKB2
VANGL2
PAPSS2
DPY19L4
CCDC130
CRYBG1
RPN2
MROH8
PPP1R13L
POLR1G
GALNT3
MAT2A
UBE2F
TPD52
MED30
MRPS35
RAD21
G2E3
MAL2
NDFIP2
ACTR6
STX18
HEXIM2
KANSL2
ZHX1-C8orf76
ZHX1
HIKESHI
CD46
MOCS2
TMEM18
GPR137
KCNK4
BAD
NUF2
RHEBL1
KMT2D
ZBTB6
RC3H2
SECISBP2L
NFATC2
COQ9
CIAPIN1
PIK3R3
PPP4R3B
ZNF497
A1BG
PMS1
ORMDL1
CCNJL
WDR11
ARL14EP
KDM3A
TTC26
CTNNB1
ZBTB11
PTPDC1
UBR2
TSEN15
RPL24
ZC3HAV1L
CEP126
ANGPTL5
SMIM11B
SMIM11A
RASGRF2
RUVBL1
MGAT4B
SQSTM1
TEAD1
CPEB3
LIG4
ABHD13
DCBLD1
MARCHF5
ARHGEF35
ZNF711
TTC39A
SATL1
PRKD3
GIT2
ANKRD13A
TBC1D17
PNKP
AKT1S1
MRPL45
TRMT61B
COL9A3
ZNF777
TENT5A
ELMOD2
CORO2A
RAI1
TMEM9B
B3GALNT2
DMBX1
ZNF780A
ITGB6
PTBP3
PRKDC
MCM4
GTF2H2
TP53I3
SF3B6
GTF2H2C_2
RBM28
ARHGAP27
EXOSC10
SAP18
CBLB
GADD45A
ITGB1
TCF12
PDF
NIP7
COG8
ZNF226
RNF19A
VPS50
HEPACAM2
UBE2T
PPP1R12B
OTULIN
HES6
REEP6
PCSK4
GTF3C2
LSG1
COMMD2
CCNC
ACOT2
ZNF576
IRGQ
YPEL5
ZCCHC9
SNRPG
FAM136A
NDUFV2
RPS27A
CLHC1
ZNF518A
WRNIP1
MYLK4
MRPS24
PTOV1
CALU
SNRPB2
FAM98A
PPP1R8
EPHX1
RNF139
SCAF11
TIMMDC1
ZNF280D
MTREX
DHX29
SMARCA5
C1orf115
NAGK
TRNAU1AP
TUBG1
RETREG3
ARL10
EIF3A
DISP1
WDR53
FBXO45
IREB2
C19orf48
NUFIP2
FAM3C
CDC42EP1
PPIL2
CLCF1
CPEB2
C18orf25
INTS6L
EIF2AK3
KRIT1
ANKIB1
RPS27L
TNFRSF11B
COLEC10
GSDMD
SHPRH
NSD2
RTL10
GNB1L
PGBD4
EMC7
CDON
VIRMA
ZC3H6
THAP5
DNAJB9
GPR37
HSPE1-MOB4
HSPE1
HSPD1
ARL2BP
TSPAN12
SHROOM1
PTCD2
MRPS27
MRPL42
ERCC1
FBF1
RRM1
C6orf89
OTUD7B
NBN
RMDN2
TRMO
ERBB2
C9orf85
ABHD17B
DDX52
STXBP4
COX11
SHC3
GPSM2
ITGB8
UBC
WDR36
CFAP20
HAGH
FAHD1
ITGB5
ZNF770
ICE2
CSTF3
KIF16B
VEGFB
BET1
TRPT1
NUDT22
DNAJC4
SLC24A1
INTS14
GTF3C3
C2orf66
GLCE
ZNF451
MVK
MYCBP2
COG7
BICDL2
MMP25
VPS36
CKAP2
TRAPPC2
OFD1
HELZ
PDXDC1
FANCI
PRKAB2
CHD1L
METTL9
MAP3K13
POC5
TMED2
MEF2A
KBTBD7