ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448664 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◣ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

MTRNR2L2
ZC3H10
PGK1
FLOT1
H2BC11
H2AC11
MTRNR2L8
H2BC4
H2AC6
PHF1
MAZ
DVL2
CHMP2A
MSH4
SYCE2
DHPS
SLC38A2
H1-4
H2BC5
H3C15
H3C14
H2AC19
H2AC18
DALRD3
B3GALT4
H4-16
CD68
NAT10
C6orf226
H4C12
ATAT1
SIX5
C18orf32
H4C3
H4C2
H2BC12
H2AC12
ZBTB45
H4C11
RAD23A
SYNRG
PSMG1
EDC4
KRBA2
NDUFB10
ARFGAP2
C19orf53
JMJD7-PLA2G4B
JMJD7
SUMF2
H2BC21
H2AC20
DNAJB14
DNAJC9
PRKAG1
UCKL1
GPAA1
RIT1
COX18
VPS28
ZNF34
ABTB1
CLN8
H3C7
RGL2
DAPK3
CCDC24
SLC50A1
NRAS
PDCD2L
GRAMD2A
VTI1B
SNAPC5
H2BC17
H2AC17
FAM228B
SF3B6
RPS15A
UPF3A
MRPL28
RCE1
H2AC21
NAT14
HSD17B8
CDK11A
CCDC34
ZBTB12
POLG2
PRRT2
IKBKG
G6PD
KMT5B
H2BC8
H2AC8
MYG1
ZFX
PDE4A
UBTF
H1-2
VEZF1
PHLDA1
MAML1
ADAMTS10
SECISBP2
ATP5F1E
GTF2A2
H3C2
H2AC4
PIP5KL1
FAM131A
CCDC107
TMEM230
CYRIB
CXorf38
SCRIB
DHRS11
H3C4
NADSYN1
HMCES
WDR97
WBP1
THOC6
HCFC1R1
COX20
TRIM37
ARL6IP4
AKAP8
POMZP3
FLOT2
ZNF446
GGA2
YY1
SCAMP3
CUL7
GANAB
ORAI3
MFSD3
WDR6
IDI1
MTA2
PYGO2
LOC101928120
RRP36
GPN2
FUT11
GATD3B
GATD3A
H4C5
ANTKMT
C6orf47
GSTO2
RSRP1
AMDHD2
CDK16
ANAPC4
E2F3
TOM1
H2BC13
H2AC13
H3C10
GCN1
SCFD1
TAPBP
STUB1
SH3BGRL3
TUSC2
TYSND1
ALOXE3
ELK1
SLC12A6
DPH7
MAPK8IP3
ZNHIT2
TLCD1
ZNF584
ROPN1L
H3C13
H2BC18
SEC14L1
CENPA
MVB12A
SNAP47
ICA1L
MRPL53
LRRC24
ROMO1
NFS1
C17orf49
HMGN2
PRKRIP1
ZNF581
ISY1-RAB43
ISY1
ZNF580
GNE
NOLC1
NPM3
ZFP36L1
SIRT7
HDAC10
NDST2
PLPP5
MAD1L1
GMPPB
H4C9
GAGE8
GAGE2E
GAGE2D
GAGE13
ZNF653
C5orf24
MOV10
TEDC2
STYX
OSTC
H2BC15
H2AC15
TMEM132A
CDH24
DNAJC4
TBCD
PRMT3
CEMP1
SRSF11
H2BC7
H2AC7
SSH3
ADAT1
RILP
H4C15
H4C14
SP3
PIM2
H4C1
H3C1
PCBP4
EPN1
MFN1
DYRK1B
CCDC97
DDAH2
SGSM3
CELF1
DECR2
SNX16
INPP5K
SCML1
MDP1
KLHL11
WDR90
TMEM179B
TAF10
PDF
EHBP1L1
TCTEX1D2
POLB
RAB5B
PPP1R15B
CISD3
SRSF4
MYL6
SPATC1L
NME3
NR3C1
CSNK1G1
ADK
VWA7
ACADVL
TUBD1
RPS6KB1
NOL7
MLX
FNBP1
VPS4A
C16orf46
CLIC3
TTC33
TUT1
KIF2C
SPOUT1
GTPBP6
TBK1
MMP24OS
MMP24-AS1-EDEM2
CTNNAL1
SLC25A17
FASTK
GPS2
NFATC3
C8orf76
C11orf91
DONSON
MST1
LARP1
NAA80
HYAL3
CAPNS1
BAZ2A
XRN1
SNX14
NUMBL
CEP192
JMJD8
GET4
CRK
KLC2
BAG2
SENP3
DMPK
C19orf71
FBXO31
MAP1LC3B
ST3GAL3
DCAKD
STAG1
RBM4
ABCB6
TNS2
NOXO1
NUDT17
SELENOO
RASD1
POLD1
ZNF35
TAOK2
H3C8
NXF1
MCCD1
INPP5E
H4C8
SELENOH
RABGEF1
NECAB3
TFPT
PRPF31
FAM83E
NOP2
LLGL2
RNF225
POMT1
DPP3
PLEC
C7orf26
MLH3
ANKRD12
CACNB1
SURF6
IAH1
PIDD1
ACOX3
URGCP
URGCP-MRPS24
LRP2BP
ANKRD37
TLCD2
PSMB8
NANOS1
IGF1R
TTLL3
FAM156B
SLC35A2
FAM156A
MAN2C1
TSPAN31
DCK
SLC25A10
HAX1
SREBF2
CELSR3
C12orf57
CCDC85B
MROH6
COQ3
ZNF865
RSRC1
WDR62
THAP8
ANKRD39
C5orf15
MPHOSPH8
TIMM13
MROH1
TENT4A
DPM2
MRI1
PYGM
SLC25A42
TXN2
SLC25A6
PTCH1
CS
PFN2
TIGD3
PRR7
PLEKHN1
CRELD1
WDR27
C6orf120
PABPN1
ABCF3
PRAF2
GDI1
TEX22
ANP32B
RRM1
ZNF517
FBXO4
RCC2
ZNF335
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
ICE1
IPO13
VDAC2
RWDD1
NME6
OAZ3
MRPL9
C19orf48
REXO1
MRPS7
GGA3
LYRM4
FARS2
PSMD12
SLC35B1
SUCLG1
ZNF576
IRGQ
NCLN
HSPA9
EFTUD2
CCDC103
SUDS3
CAPRIN1
UBE2I
RBBP5
PSMG2
CEP76
UPF2
GOSR2
POLR2E
EXOSC5
BCKDHA
DCTN1
VARS1
BLCAP
NUP205
MRPS5
HADHB
HADHA
STAM2
PSMD1
ACTR10
CDC73
COX7A2L
POLR2J3
COMMD1
CCT4
STAM
PAK1IP1
C6orf52
TSNAX
SEC61B
ALG2
SUPV3L1
SART3
ISCU
PI4KB
RABGGTB
MRPL40
HIRA
SKP1
USP1
PDAP1
BUD31
PES1
NDUFA4
EPN2
PTGES2
ZRANB2
FAM174C
PCBP1
FARSB
ATP5MG
KMT2A
RPL21
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
EIF4ENIF1
BRWD1
PNO1
EIF2S3
DDX39B
MRPL24
PDHX
APIP
VPS9D1
AXDND1
PNMA1
VARS2
EXOSC6
SEC31A
BAG6
PCBD2
ZNF513
CCDC138
GADD45GIP1
TMED1
RPS27A
CLHC1
PIP4K2B
ANAPC7
CD320
GOLGA5
RCOR3
TBCK
AIMP1
MRPL38
RXYLT1
ECI1
MRTO4
EMC1
IMPDH2
SMC2
LAMP1
FDX2
FADS2
YJU2
SCO2
RHOT2
H3-3A
TTC8
RPS23
ATP6AP1L
PIN4
GLRX2
NDUFS3
MATR3
KBTBD4
TOB2
LMNB1
CSKMT
C11orf98
DPH6
GTF2IRD2B
THOC5
NDUFA10
USP21
NAPRT
GTF3C4
DDX31
ARF3
CRTC2
FAM104A
C17orf80
BICRA
RPL35A
IQCG
SRRT
RABGAP1
KIF27
ATXN2
RBKS
BABAM2
DENR
AGO3
TSC1
GFI1B
CALM2
CNPY2
BCAP29
MEMO1
POLR2C
RPL7
RDH10
GAGE2C
GAGE2B
GAGE2A
DENND4B
ENAH
POM121C
LRP6
IRF2BP2
PWP2
LOC102724159
CDK12
SRCAP
LOC730183
TLL2
PPFIA4
WDR24
PACS1
RPN1
GINS2
ADNP
ROGDI
SFT2D3
PATZ1
LRRC37A3
PROSER1
NHLRC3
TMPPE
GLB1
SAMD1
PAXBP1
RPS12
MLXIP
EIF4A1
H2BU1
TUBGCP6
CSRNP2
ANKLE2
PNRC1
OTUD7B
LBR
TBC1D13
PAF1
TRIM45
ATXN7L2
STMP1
SF3B3
COG4
C7orf25
IFRD2
AP3M1
MTMR10
DPY19L4
HSPA1B
TTYH2
NAXE
WDR74
EIF2D
MORC3
DNAJC21
UFM1
DRAP1
C11orf68
NPRL3
C8orf37
TRMU
ACTN4
ZNF398
MAP3K12
GPX1
CCDC130
ZNF341
MT2A
LONP1
CATSPERD
SETD5
MRPL12
METTL8
DCAF17
PURA
NUDT16L1
TARS3
SOD2
APTX
ZBTB2
PHIP
XPNPEP3
ST13
CMTR1
RASA4B
MADD
CUL9
GPR137
POLDIP3
TP53BP2
RICTOR
TRIM3
H2AW
OVCA2
MIF4GD
C8orf82
SFXN4
TLE3
SRA1
RUVBL1
CTNNB1
DGKZ
C17orf75
HYI
MEPCE
JPT2
CLK3
EGLN1
DERA
HNRNPF
HAGHL
YAP1
TFAP4
MRM1
CAMK2N2
TXLNA
MTF2
PPP3CB
GBA
KMT2D
DNAJB4
RNF166
CTU2
PHF10
ALKBH5
ACVR2B
FIGN
MORF4L1
ADARB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RRM2
COA6
TSFM
ATP6V0B
ASXL1
GABARAP
RPS29
LRR1
TMEM267
NFAT5
CCAR2
RFX1
ZNF76
ATXN2L
KAT6A
ATAD2
HNRNPU
NDUFB2
N4BP2
NDUFS7
STRIP1
CYC1
CACFD1
LUC7L2
UFSP1
RAB23
KLF12
PRKDC
MCM4
CHAF1B
PRRC2B
NOTCH2NLA
COMT
JADE2
QSER1
DESI2
TRAP1
ZMIZ2
PMF1-BGLAP
PMF1
DIDO1
FAM199X
RUFY2
FBXL3
KIAA2026
B4GALT7
PCDH9
RAB4A
PKM
ZNF48
SMG5
CYB561D1
C1QBP
SQSTM1
PPP1R37
LRRC73
ZNF862
MCOLN1
SIPA1
PCBP2
EEFSEC
PANK1
ZNF383
MTIF3
NOXA1
CHEK1
FAM118A
CCDC78
IBA57
RIPK1
SMN2
SMN1
SLC39A13
AQP11
TRIM65
RAB1B
PRDX1
RRAGC
POP5
C1orf56
KAT8
TSPAN10
RABIF
NPLOC4
PRSS27
FANCC
AK1
THAP3
KPNB1
FAM219B
CALM1
C2
JAK1
WBP1L
RPL37
SMYD2
KAT5
CDKN2A
AMZ2
ZNF451
PPP1CC
C16orf71
ANKS3
UNC119
ANKRD54
MTHFS
ZNF251
POGZ
PAK2
GORAB
BNIP3
ZCWPW1
SGF29
NEIL1
NBPF1
ERCC6L2
PATJ
DIAPH1
SEC61A2
DNAJB12
NCOA2
HOXA5
ACADM
IL10RB
COX19
EDEM1
TULP3
MFSD14A
ATAD3A
AKT3
HIPK1
GFER
FBXW4
NFIB
UBA2
SF1
KANSL1
TNKS1BP1
SETD6
ETV6
DDX56
ZFAND6
LMBR1
FARP2
ZFP64
MTRF1L
TAF2
MKRN2
ATPAF1
STIMATE-MUSTN1
STIMATE
TRAF4
THEM4
ARSG
WASHC2C
SSX2IP
SLC6A9
CHD8
BUD13
SCAI
ING1
HNRNPUL1
B3GAT3
TMEM150A
NOTCH2NLB
SEMA4C
ECHS1
SORT1
FAM117B
ARPC3
SEMA4B
PHF8
TFAM
ACBD6
LATS1
ARHGEF12
ABCA7
NCBP3
HMGN1
ERLIN1
CDC6
CPSF1
CNP
AKAP1
NUB1
TPTEP2-CSNK1E
KDM3B
CHD1L
MYNN
NAA35
IREB2
NOTCH2NLC
MNT
DSTYK
TONSL
SPCS1
GLT8D1
CCDC88A
ABL2
PDCD6
JMJD4
NARF
ARHGEF1
E4F1
ZC3H6
FAM76B
CEP57
DDX59
FBXW5
STC2
AGK
ENOSF1
ANKH
NUDT4B
KLF6
PMM1
NCOA7
PRKACB
GOLGA1
TOMM20
KMT2C
FAM207A
SMARCD1
EHMT1
WDR37
GTPBP3
ANO8
USP3
H2AX
CUL1
PYCR2
ZBTB10
ADIPOR1
MTX1
HYKK
VCP
SMTN
RNF220
ACTR8
CYBA
TRAPPC8
ACBD3
ARSB
LAMTOR3
HMGA1
GTF2H2C_2
ZSWIM8
YWHAH
LIFR
TM2D3
OSGEP
CIRBP
APEX1
PDCD2
BOLA3
SCAP
PPP1CA
PARP1
LIN9
MAF1
PITPNM2
AGBL2
ZKSCAN2
SLC26A6
NR1D2
NKIRAS1
POLR3D
FBXL20
LRRC40
RSAD1