ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441334 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◣ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

ZNF335
RABL2A
MAPKAPK5
SRD5A1
NVL
RWDD1
RABL2B
TSN
ICE1
MRPS7
GGA3
DYNC1LI2
SUDS3
NUP85
NCLN
H4C15
H4C14
VTI1B
CAPRIN1
MTRNR2L8
REXO1
H3C15
H3C14
CACTIN
H4C12
C19orf48
PSMD12
RBBP5
IPO13
GCN1
OAZ3
MRPL9
ZC3H10
VDAC2
RIT1
VEZF1
UPF2
SEC61B
ALG2
EFTUD2
CCDC103
EXOSC5
BCKDHA
POLR3F
DZANK1
SNAPC5
VARS1
NME6
HSPA9
NDUFA4
SKP1
MRPL24
PI4KB
EDC4
COX7A2L
LYRM4
FARS2
PES1
H1-2
H4C3
EPN1
HADHB
HADHA
POLG2
ZRANB2
UBE2I
H1-4
H2BC5
C6orf226
SLC35B1
GRAMD2A
BLCAP
CDK12
H4C11
DDX39B
ZNF576
IRGQ
SECISBP2
AXDND1
SUCLG1
TLCD1
ACTR10
COX20
AMDHD2
PSMD1
MRPS5
POLR2E
UCKL1
STAM
USP1
DCTN1
NAT10
ATP5F1E
CDC73
SUMF2
COMMD1
CCT4
BAG6
GOSR2
EIF4ENIF1
TTC8
CD68
NRAS
MAD1L1
DHRS11
B3GALT4
H2BC4
H2AC6
MTRNR2L2
WDR90
PSMG2
CEP76
TSNAX
CUL7
AKAP8
ANAPC7
SUPV3L1
C18orf32
BICRA
PAK1IP1
C6orf52
PCBP1
PAXBP1
INPP5E
RABGGTB
DAPK3
RPN1
NUP205
SELENOF
HS2ST1
DNAJC21
STAM2
TAF9
RAD17
AK6
SPATC1L
FAM104A
C17orf80
C19orf53
FLOT1
PDAP1
BUD31
ATAT1
BAZ2A
KRBA2
SART3
ISCU
H3C2
H4C8
MSH4
H2AC19
H2AC18
FARSB
EIF2S3
TMED1
H2BC21
H2AC20
H2AC21
GPAA1
RNF166
CTU2
ATP5MG
ARF3
VPS28
FAM131A
GADD45GIP1
SLC50A1
RPL21
TBCK
AIMP1
PNO1
XRN1
RAD23A
DNAJC9
MAZ
PRRT2
CCDC97
NPM3
HAX1
TBK1
HMCES
ERCC6L2
H3C13
H2BC18
TIMM13
ANKFY1
C5orf15
MAML1
ECI1
RRP36
DENND4B
MAPK8IP3
TM9SF1
TTC33
H4C1
H3C1
MLX
H1-5
SYNRG
TUSC2
COX18
NDUFS3
KBTBD4
FBXO4
SCRIB
CHMP2A
C7orf25
DPH7
TMEM132A
PGK1
DVL2
H2BC11
H2AC11
SYCE2
DNAJB14
PHF1
DHPS
ZNF34
ARFGAP2
H4-16
DALRD3
H2BC12
H2AC12
H4C2
JMJD7-PLA2G4B
JMJD7
ABTB1
ZNF580
GGA2
PRKAG1
POLR2J3
SLC38A2
DDAH2
MYG1
C17orf49
CXorf38
SCAMP3
SIRT7
PRKRIP1
KMT5B
NADSYN1
IDI1
MRPL40
HIRA
GPN2
JMJD8
PYGO2
LOC101928120
ZNF653
PDE4A
FAM228B
SRSF11
ZBTB45
HSD17B8
SF3B6
SGSM3
CDK11A
EPN2
PTGES2
POMZP3
MRPL53
FAM174C
CCDC34
SNAP47
E2F3
H3C7
FLOT2
TMEM230
DONSON
KMT2A
SH3BGRL3
ZFP36L1
GET4
ZNF446
MMP24OS
MMP24-AS1-EDEM2
FUT11
MOV10
CCDC107
ADK
NDST2
PSMG1
C5orf24
H2BC17
H2AC17
H4C5
NAT14
TOM1
H3C4
CCDC24
BRWD1
GTF2A2
IKBKG
G6PD
HMGN2
NDUFB10
NOLC1
NANOS1
C6orf47
SLC25A10
STAG1
H2BC7
H2AC7
PDHX
APIP
VPS9D1
H2BC8
H2AC8
CAPNS1
DYRK1B
TRIM37
NECAB3
RGL2
ZFX
CYRIB
KIF2C
CDH24
WBP1
SCFD1
VWA7
NXF1
H2BC15
H2AC15
THOC6
HCFC1R1
CDK16
GANAB
PNMA1
VARS2
GMPPB
MDP1
EXOSC6
TAF10
SEC31A
PHLDA1
PDCD2L
PCBD2
ZNF513
CCDC138
CISD3
RPS27A
MAN2C1
CLHC1
PIP4K2B
CCDC85B
PCBP4
SURF6
WDR6
CD320
SELENOH
POLD1
SPOUT1
GOLGA5
RCOR3
RCE1
KLHL11
UBTF
GSTO2
SP3
LLGL2
HDAC10
RPS15A
SNX14
BAG2
MRPL38
RXYLT1
TYSND1
MRPL28
H2BC13
H2AC13
MRTO4
EMC1
PIP5KL1
NME3
IMPDH2
SMC2
TEDC2
STYX
H2AC4
LAMP1
INPP5K
FAM83E
UPF3A
FDX2
SIX5
FADS2
C7orf26
CELF1
PRAF2
ELK1
YJU2
SCO2
ORAI3
RHOT2
H3-3A
ARL6IP4
MST1
H3C10
RPS23
ATP6AP1L
PIN4
GLRX2
GATD3B
GATD3A
TMEM179B
MATR3
FNBP1
ROPN1L
TOB2
LMNB1
CSKMT
C11orf98
SRSF4
MTA2
DPH6
RBM4
ANTKMT
GPS2
GTF2IRD2B
RILP
THOC5
NDUFA10
LARP1
USP21
CTNNAL1
NAPRT
STUB1
H4C9
GTF3C4
DDX31
CRTC2
ZNF35
PIM2
LRRC24
RPL35A
IQCG
SRRT
VPS4A
RABGAP1
ZNF581
ICA1L
IGF1R
ANAPC4
KIF27
ZBTB12
ABCB6
ATXN2
RBKS
BABAM2
DENR
AGO3
TSC1
GFI1B
TAOK2
CENPA
PABPN1
CALM2
CNPY2
URGCP
BCAP29
MEMO1
POLR2C
ZNF865
RPL7
RDH10
GAGE2C
GAGE2B
GAGE2A
C16orf46
URGCP-MRPS24
ENAH
DECR2
ABCF3
POM121C
LRP6
IRF2BP2
PWP2
LOC102724159
SRCAP
RNF225
LOC730183
SLC12A6
PRMT3
TLL2
PPFIA4
WDR24
PACS1
MYL6
GINS2
ADNP
ROGDI
SFT2D3
PATZ1
LRRC37A3
SEC14L1
RABGEF1
PROSER1
NHLRC3
CRK
MVB12A
TMPPE
GLB1
C19orf71
SLC25A42
PLPP5
SAMD1
EHBP1L1
SREBF2
TIGD3
CS
SELENOO
CRELD1
RPS12
CSNK1G1
LRP2BP
ANKRD37
MLXIP
TCTEX1D2
ADAT1
EIF4A1
H2BU1
TUBGCP6
TTLL3
TLCD2
NOL7
CSRNP2
TXN2
SLC25A6
RSRP1
ANKLE2
PNRC1
PDF
OTUD7B
LBR
TBC1D13
CELSR3
PAF1
TRIM45
ATXN7L2
STMP1
SF3B3
COG4
IFRD2
AP3M1
MTMR10
ROMO1
NFS1
DPY19L4
HSPA1B
TTYH2
NUDT17
MFSD3
NAXE
WDR74
EIF2D
MORC3
FBXO31
UFM1
DRAP1
C11orf68
NPRL3
CLN8
C8orf37
TRMU
ACTN4
ZNF398
MAP3K12
GPX1
CCDC130
WDR27
C6orf120
ZNF341
MT2A
LONP1
CATSPERD
SETD5
MAP1LC3B
MRPL12
METTL8
DCAF17
WDR97
PURA
NUDT16L1
TARS3
SOD2
APTX
ZBTB2
CEMP1
PHIP
ZNHIT2
YY1
POLB
XPNPEP3
ST13
CMTR1
ZNF584
RASA4B
MADD
CUL9
ANKRD12
GPR137
ACADVL
POLDIP3
TP53BP2
RICTOR
TRIM3
H2AW
IAH1
OVCA2
SLC25A17
MIF4GD
C8orf82
SFXN4
NUMBL
TLE3
SRA1
RUVBL1
CTNNB1
ST3GAL3
DGKZ
C17orf75
TAPBP
HYI
MEPCE
JPT2
CLK3
MCCD1
EGLN1
DERA
HNRNPF
HAGHL
YAP1
TFPT
PRPF31
PIDD1
TFAP4
MRM1
GNE
CAMK2N2
TXLNA
MTF2
PPP3CB
ADAMTS10
MROH6
DCAKD
GBA
KMT2D
DNAJB4
PHF10
ALKBH5
ACVR2B
FIGN
POMT1
MORF4L1
ADARB1
ISY1-RAB43
ISY1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RRM2
COA6
TSFM
ATP6V0B
ASXL1
GABARAP
CEP192
RPS29
LRR1
TMEM267
NFAT5
CCAR2
RFX1
ZNF76
ATXN2L
KAT6A
ATAD2
HNRNPU
NDUFB2
N4BP2
NDUFS7
STRIP1
C12orf57
CYC1
DNAJC4
CACFD1
LUC7L2
UFSP1
RAB23
KLF12
PRKDC
MCM4
CHAF1B
PRRC2B
NOTCH2NLA
KLC2
COMT
JADE2
QSER1
DESI2
TRAP1
ZMIZ2
PMF1-BGLAP
PMF1
DIDO1
FAM199X
RUFY2
RSRC1
FBXL3
KIAA2026
B4GALT7
PCDH9
SNX16
RAB4A
PKM
ZNF48
SMG5
CYB561D1
C1QBP
SQSTM1
PPP1R37
LRRC73
ZNF862
TUT1
MCOLN1
SIPA1
PCBP2
EEFSEC
PANK1
NOP2
ZNF383
MTIF3
NOXA1
GDI1
CHEK1
FAM118A
CCDC78
IBA57
RIPK1
SMN2
SMN1
SLC39A13
AQP11
TRIM65
RAB1B
PRDX1
RRAGC
POP5
C1orf56
SSH3
KAT8
TSPAN10
RABIF
NPLOC4
PRSS27
FANCC
AK1
THAP3
KPNB1
FAM219B
CALM1
C2
RCC2
JAK1
WBP1L
RPL37
SMYD2
KAT5
CDKN2A
AMZ2
ZNF451
PPP1CC
C16orf71
ANKS3
UNC119
SENP3
ANKRD54
MTHFS
ZNF251
FAM156B
POGZ
PAK2
GORAB
BNIP3
ZCWPW1
SGF29
NEIL1
NBPF1
PATJ
DIAPH1
SEC61A2
DNAJB12
TNS2
FASTK
NCOA2
HOXA5
ACADM
IL10RB
COX19
EDEM1
TULP3
MFSD14A
MRI1
ATAD3A
AKT3
CLIC3
HIPK1
GFER
FBXW4
NFIB
NFATC3
ACOX3
UBA2
SF1
KANSL1
ANP32B
TNKS1BP1
SETD6
ETV6
DDX56
ZFAND6
LMBR1
FARP2
MROH1
ZFP64
MTRF1L
TAF2
MKRN2
ATPAF1
STIMATE-MUSTN1
STIMATE
TRAF4
THEM4
ARSG
WASHC2C
SSX2IP
SLC6A9
CHD8
BUD13
SCAI
ING1
HNRNPUL1
B3GAT3
TMEM150A
NOTCH2NLB
SEMA4C
ECHS1
SORT1
FAM117B
ARPC3
SEMA4B
PHF8
TFAM
ACBD6
LATS1
ARHGEF12
ABCA7
NCBP3
HMGN1
ERLIN1
CDC6
CPSF1
CNP
AKAP1
NUB1
TPTEP2-CSNK1E
KDM3B
C8orf76
CHD1L
MYNN
PRR7
NAA35
IREB2
NOTCH2NLC
MNT
DSTYK
TONSL
SPCS1
H3C8
GLT8D1
CCDC88A
ABL2
PDCD6
JMJD4
NARF
ARHGEF1
E4F1
ZC3H6
TSPAN31
FAM76B
CEP57
DDX59
FBXW5
STC2
RAB5B
AGK
ENOSF1
ANKH
NUDT4B
KLF6
PMM1
NCOA7
RASD1
PRKACB
GOLGA1
COQ3
TOMM20
KMT2C
FAM207A
SMARCD1
EHMT1
WDR37
GTPBP3
ANO8
USP3
H2AX
CUL1
PYCR2
ZBTB10
ADIPOR1
NAA80
MTX1
HYAL3
HYKK
VCP
SMTN
RNF220
PPP1R15B
ACTR8
CYBA
TRAPPC8
ACBD3
WDR62
THAP8
ARSB
LAMTOR3
HMGA1
GTF2H2C_2
ZSWIM8
YWHAH
LIFR
TM2D3
OSGEP
CIRBP
APEX1
PDCD2
BOLA3
SCAP
PPP1CA
PARP1
LIN9
MAF1
PITPNM2
AGBL2
ZKSCAN2
SLC26A6
NR1D2
NKIRAS1
POLR3D
NR3C1
FBXL20
LRRC40
RSAD1
CCNT1
ROM1
MARCHF7
EML3
EFCAB13
STX18
PRKAB2
EFCAB2
TMEM223
TBCD
STK36
RNF25
PANK3
SPTAN1
BCAR3
ATXN7
BMI1
TRMT2A
TCF3
RANBP1
BSCL2
ARHGEF11
SLC24A1
SKIDA1
INTS14
BRAF
AURKAIP1
ZZZ3
ZBTB38
PDE4DIP
MARCHF6
C11orf91