ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018230 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◣ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H3C15
H3C14
POLR2J3
DNAJB14
FAM174C
H4C15
H4C14
KMT2A
ENAH
MORC3
B3GALT4
TLCD1
H2BC21
H2AC20
H2AC21
IDI1
H3-3A
RRP36
ZC3H10
H1-4
H2BC5
SCRIB
MORF4L1
AMDHD2
RCOR3
VEZF1
ZNF34
H3C2
H2BC11
H2AC11
KLF12
EGLN1
C6orf226
COX20
SECISBP2
CTNNB1
TARS3
KIF27
PPP3CB
JMJD8
HNRNPU
VPS28
KIAA2026
PIP4K2B
PRRC2B
DESI2
H1-2
ABL2
MMP24OS
MMP24-AS1-EDEM2
H2AC19
H2AC18
TMEM230
PYCR2
TRAPPC8
POGZ
AKT3
HMGN1
PRSS27
C17orf49
NECAB3
FBXL3
LMBR1
SNAPC5
HMGN2
EPN1
ZBTB2
H4C1
H3C1
SYNRG
H3C13
H2BC18
SRSF11
TBC1D13
H4C11
ZNF398
SETD5
RAB4A
GATAD2B
IBA57
MEMO1
AGK
DEDD
VPS9D1
TNRC18
FAM118A
POLG2
PARP1
ZNF580
HIPK1
ZNF513
GTPBP3
ANO8
H4C3
PPP1CC
ADARB1
NCOA7
EDC4
KMT2C
CLK3
CUL1
UBP1
PCDH9
TPTEP2-CSNK1E
EYA4
QSOX1
ATXN7L2
NOXA1
ZFAND6
PANK3
EZH2
BRWD1
RABGAP1
NFKBIA
AKAP8
C15orf39
MAP3K21
ARHGAP35
AKT2
EIF2D
YBX1
ZBTB20
DNAJC9
HNRNPF
RRNAD1
ISG20L2
DRAP1
C11orf68
RUFY2
NUDT4B
CDC42BPA
HSPG2
CTNNA1
SVBP
ERMAP
MAN2C1
HYI
SPIN1
SP3
HECTD1
TFAP4
ACBD3
DYRK1B
PDCD2
TAF10
B3GALNT2
CMTM7
BRAF
SP1
DVL2
NUB1
C18orf32
FPGS
FNBP1
OTUD7B
DPY19L4
SSX2IP
H2BC12
H2AC12
VANGL2
MAP3K2
SLC25A10
NAXE
RAVER2
ZNF768
DPH7
RRM2
GDPGP1
CIB1
USP21
RASA4B
ARHGEF11
STAU1
BMI1
FAM199X
SKIDA1
MSL3
NOTCH2NLB
CCDC88A
GPR180
CCSAP
ASH1L
NCAM2
ESR2
CUL7
UBE2D2
FBXO11
DONSON
SMIM19
SLC20A2
NUCKS1
TRABD
DSG2
SCAMP3
HIVEP1
EPHX1
MKRN1
JAK1
CIZ1
NUTF2
CENPT
UBE2J2
ARID3B
KANSL1L
RNF11
ADSS2
ZMYM4
SRCAP
LOC730183
STMP1
MCL1
SPOPL
PCBD2
CHMP2A
PPP1CA
NR1D2
NKIRAS1
NR2C2
PRRT2
SMYD2
DDX59
CIRBP
SATB1
NFAT5
ITGB3BP
EFCAB7
PHACTR2
SMARCD2
ATP11B
OPN3
CHML
ZBTB18
NOTCH1
EFCAB2
KANSL1
LUC7L2
CDC42EP4
WIZ
PABPN1
CECR2
KMT5B
GTF2IRD2B
ZNF341
TP53BP2
PEX7
GALNT11
ITGB1
URB2
TAF5L
UBA3
ANKRD54
REV3L
ANKRD50
GPAA1
REPIN1
AGO3
NCOA2
ZNF48
TSEN15
TMEM150A
PRPF40B
CBX1
USF3
SCRN1
LRRC37A3
ADNP
MKRN2
CHD1L
PRKAB2
PRKAG2
ZNF70
C7orf26
STC2
RWDD3
SLC22A23
H3C4
H2BC7
H2AC7
H3C10
ATXN2
UNC5A
TATDN2
SUMF2
SLAIN1
RAD54L2
SEC31A
BACH1
NT5C2
SYT14
KDM3B
TLK1
DISC1
LRRFIP2
TBXAS1
HIPK2
SAMD1
ZNF862
THRB
SOD2
DHX9
ZNF213
NRAS
CHAF1B
WDR48
SCN11A
ZBTB37
C21orf91
DENND4B
PPP4R2
MSI2
TACC1
MRPL40
HIRA
UBA2
TIGD1
EIF4E2
HOXA3
GAREM1
SPRY2
TMEM68
TGS1
ABCB10
THAP12
GVQW3
USP12
ANKRD36C
JAGN1
PACS1
GPC4
PHYKPL
MAZ
GLRX2
CASC3
EPS15
ANP32B
ATXN7
RBX1
H2BC15
H2AC15
MTF2
MIER1
BMP2K
ANKRD28
ZNF445
SLC35D1
TRAM2
HSPE1-MOB4
HSPE1
HSPD1
STX18
DSTYK
HPRT1
SDCCAG8
CEP170
TRDMT1
FNDC3A
INPP5E
UFSP1
DBN1
LPGAT1
PPFIA4
TXLNA
DNAJB12
AP1S2
EPM2A
DEGS1
LAMC1
DYNLL2
STAG1
DIDO1
ACBD6
GCLC
MPP5
SESN1
PIAS1
PTMA
USP34
ATXN2L
NBPF1
ZNF652
FAM53C
CDC25C
HMGB1
B4GALT1
POMZP3
H2BC13
H2AC13
PHIP
CDC42
LPAR3
HECTD4
PIK3R1
KANSL3
CMTM3
C15orf61
CYREN
TRIM24
GREB1L
RILPL1
ZNF76
SETD6
PHC1
BCAP29
PURA
C18orf21
PFN2
RBBP8
UBE2V1
GCN1
DENND2B
N4BP3
PITRM1
KCNB2
PRR7
PRKRA
PJVK
ZBTB17
B4GALT6
FAH
RAD23A
IGF1R
UBE2Z
EXOC2
MIB1
ARHGAP10
SLC27A4
RFK
SNAP47
SGPL1
UNK
MYBL1
PKP4
CCDC148
KEAP1
ERICH2
TCAF1
SRSF4
ARHGEF12
NUDT4
TGIF2-RAB5IF
TGIF2
H4C4
CPSF1
TM2D3
PXK
ZMYND11
RC3H2
ZNF740
PSEN2
CSAD
TPGS2
TCTE3
ERMARD
ZNF865
WDR37
RNF220
BTBD1
CD276
IQSEC1
RCN2
H2AZ2
PSTK
DDHD1
TLN1
CREB3
ZBTB38
SRRM3
CAPN7
PGBD5
PAFAH1B2
RBM15
STARD4
MAX
LATS1
ARL8B
WRNIP1
RALB
WDR17
DNAJC6
MID2
SQSTM1
SBF2
MGAT4B
STON2
DTD1
LMO7
GALNT2
RYR2
FHOD3
ARFGAP2
TSC1
GFI1B
CREBRF
DSP
TBC1D5
PEX3
ADAT2
SRD5A3
SOWAHC
SEPTIN10
C17orf75
NOTCH2NLA
JUP
PTPN14
NOVA1
RALGAPA1
KRBA2
H4C5
RASA4
MPC2
DCAF6
STUM
TRIM3
THEM4
RABGGTA
DNAH14
KMT2E
HOXB9
GPRIN1
BPHL
E2F3
RFX1
LIX1L
PTPN4
EBAG9
RNF138
GPBP1
RANBP17
ZBTB44
DYNC1LI2
TMEM132A
PCBP2
SMIM13
CNOT8
BPTF
TAB2
PAQR3
STRN
CRTAP
PTPRU
TLE1
DCAF1
FAM131A
PNRC1
PHF10
COG2
SEC22C
NKTR
ATXN7L3
SDC4
SERTAD2
ATF1
ADPGK
DYNC1LI1
DECR2
NOTCH2NLC
FAM207A
ZFYVE9
ANKRD18B
EPB41
CNIH1
SPACA6
CDC73
BHLHE40
TARBP1
TRIM44
ZNF697
PARP16
PLEKHH3
ARSG
ASPSCR1
IMPACT
ERO1A
SLC16A6
RXYLT1
B4GALT7
SPTAN1
RNF139
LSS
FBXO30
CDK13
GET4
PATJ
RNF135
SMARCB1
RBM26
PRKCQ
CEP68
YPEL1
KCNH1
SYNCRIP
FN1
ZKSCAN2
GAA
HLCS
TTC21B
HOXD8
DCBLD1
SRXN1
SLC5A6
ATRAID
RUVBL1
EEFSEC
TSPAN10
NPLOC4
GOLGA1
MSRB2
HDLBP
TAOK1
UBE2L3
RIMBP3C
RIMBP3B
SLC17A5
FNBP1L
CRIM1
TMEM179B
ARSB
PRRC2A
PTEN
KLLN
ATF3
DGKH
IQGAP1
ZNF644
BRPF1
ATP1B1
KAT6A
SLC44A1
POLG
RNF38
SRR
SMG6
SLC44A3
ZMAT1
CDC5L
CLN5
PAFAH1B1
SENP8
MYO9A
SRF
SUSD5
CCDC92B
H2BC4
H2AC6
WDR27
C6orf120
COA6
GTF2H2C_2
DNAJC25-GNG10
DNAJC25
FBXW2
GTF2H2
KLHL25
RMC1
LYST
RASAL2
UIMC1
FBXL4
OSBPL6
MAPK8IP3
PNMA1
ROM1
EML3
HES1
DNAJB2
AKAP13
VDAC3
DTX2
RAPH1
LHX4
MECP2
C3orf80
UBE2N
RBSN
NCBP3
FAM3C
CPOX
CLASP2
RAB43
PDE4DIP
COX5A
THAP9
SPTSSA
NEK7
TTC23
LRRC28
AHCYL1
CHRNA5
COL6A1
LBR
SLC6A9
OTX1
NT5DC1
INSIG1
EIF4G1
TMEM250
TTLL11
ACADM
ZNF609
LRP11
SCO2
LMNB1
RNF214
PCSK7
ATP2A2
ACVR1C
SSBP2
USP33
PGBD1
RCBTB1
VPS4A
AK1
ZBTB10
XYLB
MAP2K7
C1orf53
ABI2
RGMA
CEP85L
TVP23B
FZD1
TMCC1
PYGO2
LOC101928120
MRPL38
COMT
KRAS
NPTN
DOCK7
ACTN2
MNX1
DUSP14
BRPF3
GRM2
YPEL3
LRRC8A
KYAT1
MMAA
LYPLA1
CSRNP2
FBXW5
RPL6
PTPN11
ANKRD36
PHGDH
RHEB
LARP4B
CDC7
C8G
SLC48A1
UAP1L1
MTHFS
FOXP1
STK40
ARRDC3
KIF13A
OAT
ROCK2
HDAC1
FGGY
SYNE2
GMNN
SIRT7
TIGD3
GFER
ING5
TIRAP
MLLT1
WDTC1
PLEKHF2
TTC7A
MCFD2
LNPEP
DENND10
SYN3
PSKH1
RRP1B
HSF2BP
DPP8
SIK2
PLEKHO2
RPL7
RDH10
GDI1
KAT8
TRAF4
IKZF4
DCUN1D4
CNPY1
ZC3H4
PKN3
CXADR
FASN
EDEM1
JMJD4
RNF19A
MAPKAP1
SEMA7A
CNN3
INTS12
GSTCD
ASAP3
ZNF148
TBC1D14
TLCD4-RWDD3
TLCD4
CKAP2
C12orf75
PDCD5
AMOTL1
TSHZ3
ABTB1
EIF4ENIF1
H2BU1
H2AW
THAP3
UNC119
ASB13
NECTIN3
EPB41L2
FOXG1
GGA2
SURF6
NOL7
TTYH2
SCAI
SCAF8
HNRNPA3
JARID2
RCOR2
GZF1
LRP6
SLC25A42
PKM
DCAF10
ZER1
FRA10AC1
MRPL48
SRRM2
MRPS24
IDH2
PRRG4
HOOK1
IGSF3
INO80
PYGL
H4C2
MFSD3
GPX1
POGLUT3
TTC21A
GORASP1
TKT
ERO1B
PPP4R3A
IKBKB
CBX4
BRI3
ZFX
OVCA2
ASXL1
RAB23
MRTFB
COPS7B
UBXN2A
KIAA1522
MAN1A2
ZBTB21
TGFBR2
DNAI4
AGBL3
LRP12
UBIAD1
ODC1
ATAT1
DHRS11
RCE1
SLC39A13
CALM1
BOLA3
SLC24A1
INTS14
MCUR1
METTL9
ZNF787
SLC35B2
RUFY1
RNF130
ZMIZ2
ATPAF1
SEMA4B
DHRS13
NOM1
PDP1
SYDE2
RCAN3
STK3
GALNT1
CYP2U1
CERS2
UBAP2L
C1orf43
MESD
EXOSC6
GBA
SSRP1
PSMG4
HFM1
KCNJ4
TMEM65
TLCD5
FOXJ3
INKA2
DDX20
TPK1
RAP2C
MYBL2
RASL10B
USP24
CSNK1G3
CHID1
AUTS2
TOB1
KLF4
LAMTOR3
LIN9
PHF19
PCNX2
DCP1A
ARHGAP29
ARFGEF2
UBQLN4
LAMTOR2
SURF4
UBXN6
GINM1
SNX7
TNIP1
MCOLN2
SNX17
EIF2B4
KATNBL1
EVI5
CCDC3
E2F8
SMAD4
HOXD13
TMTC4
SPATA1
GNG5
RPAP3
UNC119B
TERF2
HNRNPR
LEPR
LEPROT
ERBIN
C7orf31
ME2
FAM76A
AP3S2
HNRNPL
FBRS
CAPZA2
NIT2
HOXB4
MLLT10
KIF3B
HHIPL1
CCDC85C
GNB2
SMARCD1
VPS36
ZNF629
DIP2B
BRSK1
GTPBP1
GLCCI1
ARSA
FMNL2
NFIB
TRERF1
FEZ2
SPECC1L
DUSP16
ACTR1B
PRKD1
RMDN2
SLC25A53
ST3GAL3
ELK4
NOTCH2
SLC35A3
MRPL44
ADAM17
KIAA0232
UBE2S
ZNF746
EPC2
SMARCC1