ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448667 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◣ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
C6orf226
SYCE2
DHPS
DVL2
ATAT1
ZC3H10
C19orf53
KRBA2
EPN2
PHF1
H2BC4
H2AC6
H4C3
EDC4
C18orf32
DDAH2
NRAS
JMJD7-PLA2G4B
JMJD7
CHMP2A
DNAJC9
H4C12
SYNRG
VPS28
ZFP36L1
H4C11
B3GALT4
H2BC11
H2AC11
SCRIB
SUMF2
NADSYN1
FAM131A
GPN2
H4-16
CUL7
COX20
DALRD3
MAZ
MRPL53
NAT10
ARFGAP2
PDE4A
CXorf38
H3C7
FAM228B
SF3B6
CD68
SNAPC5
VTI1B
AMDHD2
CCDC85B
IKBKG
G6PD
SLC38A2
VEZF1
GGA2
HSD17B8
SCAMP3
STAG1
TUSC2
CCDC107
H4C2
POLG2
ABTB1
H2BC12
H2AC12
MYG1
NAT14
DNAJB14
RIT1
H1-4
H2BC5
MSH4
E2F3
ZNF653
INPP5E
H1-2
PRKRIP1
GTF2A2
NDUFB10
CAPNS1
AKAP8
THOC6
HCFC1R1
PRKAG1
KIF2C
MT2A
ZNF34
CDK11A
MRPL40
HIRA
C6orf47
H2BC21
H2AC20
RAD23A
FLOT2
H2BC8
H2AC8
MTA2
SIRT7
RRP36
PRAF2
ZNF580
SECISBP2
ZNF446
CYRIB
SH3BGRL3
PRRT2
VARS2
HMCES
H3C15
H3C14
H2AC19
H2AC18
FUT11
SCFD1
WBP1
MOV10
TRIM37
SPOUT1
CDK16
H3C13
H2BC18
CCDC24
CDH24
EPN1
FLOT1
TBK1
CSKMT
C11orf98
POMZP3
CCDC34
MDP1
POLD1
FADS2
H2BC15
H2AC15
GMPPB
CD320
DONSON
PSMG1
MST1
KMT5B
ELK1
PATZ1
UCKL1
GINS2
TLL2
IRF2BP2
TCTEX1D2
H3C2
H2AC4
ANKH
TEDC2
TRMT112
H4C5
NXF1
PDCD2L
TLCD2
PIM2
VWA7
RPS15A
UBTF
SORBS2
GANAB
HMGN2
WDR6
H2AC21
C5orf24
PHLDA1
TOM1
H3C4
NOLC1
H2BC7
H2AC7
MYNN
SNX14
LMNB1
SNAP47
KLHL11
EHBP1L1
INPP5K
GATD3B
GATD3A
PYGO2
LOC101928120
MAD1L1
GPAA1
SGSM3
MATR3
ZBTB45
NPM3
IGF1R
ING1
STYX
METTL8
DCAF17
CAMK2N2
SRSF11
TOB2
H2BC17
H2AC17
WDR90
H3C12
ZFX
C17orf49
NDST2
JADE2
C8orf37
RGL2
LLGL2
MTIF3
SP3
GSTO2
LARP1
HMGA1
POLR3D
PHF8
HAX1
SFT2D3
PNRC1
DUSP5
MAPK8IP3
COX18
SIX5
ANAPC4
GINS3
WBP1L
DNAJB4
DNAJC4
H4C1
H3C1
DHRS11
RBM4
H4C9
TTLL3
GET4
ICA1L
BAZ2A
STUB1
TIMM13
DPH7
ARL6IP4
PWP2
LOC102724159
MROH6
TRIM25
SCO2
TRIM45
GRAMD2A
DAPK3
TIMMDC1
MVB12A
ACVR2B
FAM83E
TYSND1
TMEM132A
BAG2
TLE3
PRKDC
MCM4
FDX2
HDAC10
RILP
FIGN
DYRK1B
MTMR10
SELENOH
ABCB6
IFRD2
IMPDH2
ADK
HSF4
PCBP1
MAML1
PIP5KL1
WDR24
WDR97
H2BC13
H2AC13
H3C10
ABCF3
NAPRT
ROPN1L
TUBGCP6
PNMA1
ETV6
NPRL3
ARF3
C19orf71
SGF29
XRN1
ATP5F1E
RAB23
PPP1R37
CCDC138
FAM161A
CISD3
ACTN4
CRTC2
C16orf46
CDC6
TMEM230
TBC1D22A
PXDN
CCNT1
PRMT3
LRP2BP
ANKRD37
ANKRD12
EFCAB13
SRRT
JMJD8
TMEM179B
POM121C
PIDD1
COA6
RSRC1
SREBF2
TNS2
ADGRF3
MYC
PCBP4
RABGEF1
PMM1
PHF10
KLF6
H4C8
LRRC24
LONP1
CATSPERD
ATP6V0B
SLC50A1
SEMA4C
NANOS1
EXOSC6
MCCD1
RANGRF
ZNF513
THOC5
GCN1
TTC33
SURF6
ANTKMT
CALM2
MYL6
GPR137
NARF
BAD
SLC25A10
QSER1
CENPA
PANK1
CS
APTX
LAMP1
RHOT2
DCAKD
LRP8
NME6
ORAI3
YWHAH
DPP3
H4C15
H4C14
YAP1
CRK
N4BP2
SERINC4
HYPK
MMP24OS
MMP24-AS1-EDEM2
ZNF35
TFPT
PRPF31
RAB1B
FNBP1
POP5
PHF14
TAF4
MRPL28
TAF2
ZNF782
TAF10
NME3
SLC30A7
EXTL2
STXBP2
CELF1
SRSF4
C1orf56
CSNK1G1
ROMO1
NFS1
MTFR2
FOS
VPS9D1
ZNF451
HNRNPH3
LRPPRC
TAPBP
PAIP2
CLN8
CEP192
POLR2H
RRAGC
TAOK2
SLC25A6
SIPA1
CHEK1
FANCC
HDAC7
AQP11
MLX
ADAT1
MICAL3
RCC2
MAN2C1
PCMTD2
MPHOSPH8
TRIM3
IL10RB
SPAG9
FBXO31
MAP1LC3B
MNT
C1QBP
TFAM
PYROXD1
ISY1-RAB43
ISY1
TUT1
PTMS
PCBD2
ZBTB12
C2
SMTN
SLC35A2
COX8A
MLXIP
OVCA2
SRCAP
LOC730183
MRM1
ZNF48
RSRP1
ADHFE1
EIF4A1
TTYH2
SEC14L1
HYKK
PDF
JOSD2
TLCD1
ZNF581
FOSB
CLIC3
URB1
CSGALNACT1
C7orf26
NUDT17
SETD5
CFD
ATXN2L
GLE1
SBDS
NDUFS3
KBTBD4
KLC2
VAV2
MRPL12
MADD
RPL37
FAM156B
ZIC2
TBXA2R
GABARAPL1
MAP3K1
DNAJC21
TMEM243
SEC14L2
SPRY1
DPY30
SENP3
PNPLA6
DECR2
NCOA2
UNC13D
AJM1
BCL6
MIF4GD
ARID1A
URGCP
URGCP-MRPS24
FAM117B
USP21
BCAR3
C12orf57
ZSCAN16
PTPN6
CCDC130
PTP4A1
CDKN2A
RASD1
BRD3
LRRC73
MRAS
ATXN2
SLC12A6
CELSR3
SLC6A9
SMIM27
TOPORS
CACNB3
CYB561D1
LPCAT3
RPRML
GABARAP
ARMC7
TMEM151A
C7orf25
YY1
TCIRG1
ECI1
SELENOO
INTS1
BRWD1
NAA35
SPTAN1
RARS1
CCAR2
CTNNAL1
LBR
TSFM
ACOX3
KMT2A
MRI1
ZBTB2
CACFD1
FNTA
STXBP3
SAMD1
CRELD1
TP53BP2
ADAMTS10
VGF
SLU7
IAH1
MROH1
MRPL24
SLC5A3
MRPS6
NAA80
HYAL3
CCDC97
DMPK
PAK2
SF1
ZBTB10
ALOXE3
PACS1
COQ7
CSRNP2
PRKACB
G3BP2
DERA
ABCA7
PLEKHN1
CLASRP
DHX58
COQ3
PLPP5
POLB
NOP2
SSH2
TXN2
SGK1
TUBD1
RPS6KB1
ZBTB22
PXDC1
PSEN1
GATAD1
POLR2G
H3C8
NSD2
STK19
DXO
ARHGEF17
NEIL1
TMF1
KMT2E
WDR74
SRA1
AGBL2
PGGT1B
PITX3
IVD
PRR12
ZNF25
USF2
SOD2
PKM
PDCD4
ACAT2
GTF3C4
DDX31
RABGAP1
FOXO3
SWSAP1
RCE1
RASA4B
ZFP64
GPS2
WDR27
C6orf120
NDUFA2
IK
PHF21A
RNF225
SSH3
FAM53B
SPRYD3
HOXA5
ETV4
FBXW5
KAT8
ELOVL6
PIK3CA
ROGDI
CUL9
TFAP4
NOXO1
TMEM223
NFE2L2
SPPL2B
LSM7
PHF23
TMEM14B
TSPAN31
C11orf91
NFKBIZ
TULP3
SEMA4B
TMEM101
CTHRC1
DAB2
POLR2C
ATAD2
C16orf71
ANKS3
ZDHHC12
ARL6IP6
PIP4K2B
FASTK
SLC26A6
LRCH3
SLC25A17
EXT1
BSCL2
VPS4A
PHF19
CHCHD2
STMP1
JPT2
CELF6
PHPT1
DUT
CHAC2
MTRNR2L2
IDI1
SFXN4
ZNF217
PTK2
ZNF584
AGAP11
SLC43A2
TEX52
KAT5
WDR62
THAP8
WDR75
MTX1
MRPL34
THBS3
ABHD8
NUDT16L1
LMTK3
GTF2IRD2B
TRMU
IPO4
SLC9B1
TXNDC15
CTPS1
MVP
GOLPH3
IL17RA
DYRK1A
MPC1
DDX49
COPE
HAGHL
PMF1-BGLAP
PMF1
CCDC78
ARPC3
FBXL14
NPAS2
PHIP
NFIB
POMT2
GSTZ1
C17orf58
PTCH1
SMAGP
SEC16A
C9orf163
SPRED1
TAS1R3
NOP16
H3-2
TIGD3
MRPS28
RASA4
RIPK1
KPNB1
SUOX
FOSL1
ADNP
CUX1
FAM72D
MAP3K12
SMN2
SMN1
MAGOHB
TARBP2
FABP3
PABPN1
VMAC
NDUFA11
ARRB1
SUN1
RACK1
MIS18A
PSMB8
C5orf15
SPATC1L
CYC1
FBXO4
NOL7
SNX16
NFATC3
FBXL20
ARHGEF28
EIF5A2
ATAD3A
HNRNPUL1
SORT1
NR3C1
DNM2
NAAA
DCTN6
TROAP
LIN37
NUMBL
PRPF40A
POLR2B
AK1
IFITM5
KDM4B
MAP2K5
C8orf82
KCTD15
SLC16A3
POMT1
OTUB1
LOC114841035
FKBP2
AGO3
PRDX1
VPS26A
COMMD5
RAD23B
UPF3A
KIF27
MFSD3
TXNDC5
BRICD5
FAM189B
MFN1
RHOQ
ATP6V1E2
BST2
ABHD15
ARSB
MSL1
RHOT1
TGIF1
TMEM248
MLLT3
OTUD5
RICTOR
FBXW4
ITGB1BP2
SLC25A42
DDX56
PKNOX1
SEC31A
KAT2A
BEGAIN
ARPC1B
ST6GALNAC6
GNE
CRACR2B
RNF7
DDX21
RFX1
PPP1R15B
PRELID3A
DPM2
NR2C2AP
SEPSECS
TSSC4
ZBTB25
ZBTB1
PPARG
TFAP2A
CEP70
POLR2J3
BIRC2
DENND4B
SMARCD1
BTG1
EEF1AKMT1
SOGA1
GPX4
ARHGEF12
LZTS3
ALKBH7
B2M
UNC119
KIFBP
KPTN
QKI
PCGF1
DBP
PCGF2
MED26
GRWD1
SINHCAF
ZNF865
ZNF706
MXI1
RBMX
MTCH1
LRRC8D
FBXO22
P4HA1
HEXIM2
TRERF1
PERP
ACY1
SPAG1
TPM2
ZFYVE16
TDRD3
MEMO1
RNF40
CCDC189
MAP3K8
ALDH1B1
FUT8
TAF1D
C11orf54
CNP
MTF1
PDLIM5
CDC42EP2
AGO2
SLC7A6
CABIN1
LAG3
C6orf62
RARRES2
PURA
MAT2B
ERCC5
ZFAND2B
BSG
GRK6
SF3B2
AMZ2
CCDC169-SOHLH2
CCDC169
PRPSAP2
DDT
CCNA2
PRKACA
SQSTM1
WASHC2C
PTEN
KLLN
INO80D
RAD9A
INPPL1
TCF25
ERLIN1
FAM76B
CEP57
XXYLT1
KIAA1958
C9orf147
FAM72A
MRPL10
LRRC46
UBA1
LRP6
ZNF449
DLAT
ANAPC5
JAK1
WNK1
ZNHIT2
RBM4B
RIOK2
AKAP1
SPIRE2
FBXL5
DYNLRB1
FAM174C
PPFIA4
TRAF4
RHOF
CLIP1
PABPC1
WASHC4
MFSD1
ATG5
ACRBP
CALM1
L3MBTL1
PPIA
POU2F1
B3GNT9
TRIP6
PSMA6
NKIRAS2
C6orf136
TMEM115
ZNF784
C8orf76
ZNF696
ATF3
RRM1
ALDOC
DLG1
DHRS4L1
ALG5
TTPAL
SPAG5
PPM1A
EFNA1
AP2M1
KTI12
MICALL2
COL4A6
CACTIN
ECHS1
NUDT1
MRM2
ZBED8
MFSD12
CCDC43
NUDT3
KRI1
H2BC10
CENPBD1
CIAO3
RRM2
ELOA
RCC1
JPH1
BTF3
MDK
C1QTNF6
MTMR11
PATJ
APOLD1
HERC1
ZRSR2
KREMEN2
SLX4IP
SFXN2
ARL3
GLRX2
GPX1
LIFR
RBAK-RBAKDN