ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448665 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◣ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
ZC3H10
MTRNR2L2
PHF1
C6orf226
H2BC4
H2AC6
DHPS
CHMP2A
FLOT1
H2BC11
H2AC11
DVL2
MTRNR2L8
MAZ
ATAT1
SLC38A2
C18orf32
H4-16
DALRD3
SYCE2
H4C12
EDC4
B3GALT4
H4C3
MSH4
H3C15
H3C14
H2AC19
H2AC18
CD68
JMJD7-PLA2G4B
JMJD7
NAT10
H1-4
H2BC5
KRBA2
ZBTB45
ARFGAP2
IKBKG
G6PD
VPS28
H4C11
PDE4A
NDUFB10
CDK11A
SUMF2
SYNRG
DNAJB14
NRAS
H4C2
HSD17B8
NAT14
C19orf53
H2BC12
H2AC12
RAD23A
H2BC21
H2AC20
PDCD2L
CCDC24
ABTB1
COX18
AKAP8
H3C7
SIX5
CUL7
RGL2
IDI1
PRKAG1
PSMG1
POLG2
ZFX
CLN8
TAPBP
DNAJC9
POMZP3
GRAMD2A
FAM131A
WDR6
RRP36
WBP1
SCRIB
STUB1
H2BC17
H2AC17
H1-2
MRPL28
H2BC8
H2AC8
ZNF446
ZNF34
ZBTB12
VTI1B
GGA2
H2AC21
GANAB
TMEM230
SLC50A1
DAPK3
PRRT2
ADAMTS10
SNAPC5
CXorf38
TRIM37
DHRS11
UCKL1
CCDC107
SECISBP2
RIT1
FAM228B
SF3B6
WDR97
RPS15A
CDK16
GATD3B
GATD3A
MYG1
SH3BGRL3
FLOT2
GPAA1
RCE1
NADSYN1
THOC6
HCFC1R1
PRKRIP1
CENPA
C6orf47
H3C2
H2AC4
ZNF653
KIF2C
ZNF580
ORAI3
MAML1
MDP1
PIP5KL1
MRPL53
TOM1
PHLDA1
RSRP1
RABGEF1
SCAMP3
COX20
CCDC34
H3C4
ATP5F1E
DDAH2
C17orf49
ABCB6
NPM3
H4C5
TYSND1
KMT5B
TEDC2
HAX1
EPN1
NOLC1
LRRC24
UBTF
H2BC13
H2AC13
H3C10
CEMP1
GPN2
VEZF1
CDH24
ANTKMT
AMDHD2
SP3
MTA2
TBK1
SURF6
SENP3
DYRK1B
ZNF584
ICA1L
VPS4A
HMCES
SNAP47
ELK1
MRPL40
HIRA
PRMT3
ZNHIT2
MAD1L1
CAMK2N2
VWA7
GMPPB
TUSC2
ISY1-RAB43
ISY1
FUT11
TSPAN31
H3C13
H2BC18
ROPN1L
MROH6
INPP5K
CAPNS1
GET4
NXF1
CELSR3
SLC12A6
MYOZ3
H2BC7
H2AC7
INPP5E
CYRIB
H4C9
DNAJC4
NANOS1
SELENOH
NDST2
RBM4
PIM2
TAOK2
MFSD3
ARL6IP4
H4C15
H4C14
UPF3A
FADS2
TMEM132A
TUT1
NUDT17
CTNNAL1
SMTN
PYGO2
LOC101928120
YY1
H4C1
H3C1
ZFP36L1
SRA1
TBCD
C19orf71
SREBF2
CSNK1G1
POMT1
CLIC3
DMPK
SCFD1
MVB12A
JMJD8
STAG1
SPOUT1
HDAC10
ANAPC4
MMP24OS
MMP24-AS1-EDEM2
MAPK8IP3
MAN2C1
IAH1
DPH7
GTF2A2
URGCP
URGCP-MRPS24
TFPT
PRPF31
TNS2
PPP1R15B
EPN2
ZNF513
H4C8
LMNB1
PSMB10
HMGN2
MYL6
TAF10
CRELD1
MCCD1
XRN1
RILP
DONSON
SNX14
DCAKD
NAA80
HYAL3
FAM83E
THOC5
TIGD3
RSRC1
CISD3
TCIRG1
ALOXE3
ADAT1
POLB
STYX
SUOX
GCN1
PRAF2
TLCD1
E2F3
GPR137
TULP3
SNX16
MOV10
PNMA1
CCDC85B
PCBP4
DECR2
SEC14L1
FBXW4
C11orf91
GSTO2
C5orf15
PTCH1
ZNF581
TTLL3
SLC25A6
NAPRT
CRTC2
C5orf24
GNE
MIF4GD
DPM2
LRP2BP
ANKRD37
ROMO1
NFS1
RHOF
PWP2
LOC102724159
PYGM
SRSF11
ADK
VARS2
CCDC138
SELENOO
AK1
MLXIP
TTYH2
ANP32B
ABCA7
PITX3
TEX52
PIP4K2B
CRK
TXN2
SRRT
TIMM13
POLD1
PIDD1
CD320
IMPDH2
APTX
LLGL2
NME3
CELF1
C16orf46
MAP3K12
KLHL11
TMEM179B
TLL2
MRI1
TUBD1
RPS6KB1
SGSM3
PABPN1
FBXO4
ABCF3
NUMBL
SSH3
FAM174C
MCOLN1
CDC6
ZACN
SFXN4
DDX56
TAF6
CNPY4
MLX
ZNF35
POM121C
SLC25A42
NDUFS3
KBTBD4
SIRT7
MATR3
LARP1
KPNB1
ZNF865
POP5
H2BC15
H2AC15
BUD13
TTC33
C7orf26
USP21
RNF44
WDR90
EHBP1L1
MRM1
FAM156B
FAM156A
IFRD2
DNAJB4
JADE2
RAB1B
ATP6V0B
CEP192
ACOX3
NECAB3
EXOSC6
FNBP1
PLPP5
TSFM
SLC25A10
CSKMT
C11orf98
RNF225
TLCD2
NOP2
APOE
TUBGCP6
NOL7
CHEK1
MTFR2
MRNIP
BAG2
GRWD1
IRF2BP2
FUT8
RRM1
ANKRD39
MIOX
MST1
EIF4A1
ARHGEF12
DPP3
ELMO3
KAT5
KCNK7
E4F1
ERCC5
WDR45
BAZ2A
ACADVL
CCAR2
WDR83
MAN2B1
SCO2
PPFIA4
ZNF251
CRACR2B
LZTS2
TTC16
PTRH1
FDX2
CCDC97
ST3GAL3
SCML1
STK19
DXO
ARF3
C8orf76
ADHFE1
ACTN4
FAM219B
SEC14L2
ST6GALNAC6
MED26
KDM4B
TENT4A
GPX1
PPP1R35
PIK3R2
HAS3
WDR27
C6orf120
FBXO31
MAP1LC3B
MADD
WDR24
CCDC130
TMF1
SEC31A
PDF
SOD2
JPT2
TOR3A
ACAT2
CCNDBP1
ZNF517
CEND1
TOB2
UNC13D
LRCH3
PTP4A1
RHBDL1
GPS2
ANKRD12
CASP2
AP2M1
IGF1R
AGO3
CYC1
MTRF1L
PRKACA
CACNB1
SLC25A17
AMZ2
ANKRD54
CDK11B
HAGHL
CCDC78
SPSB2
BRICD5
NDUFB2
CS
HSF4
CSRNP2
PHTF1
L3MBTL1
SPAG7
DBP
SRSF4
TCTEX1D2
C12orf57
OSTC
TSSC4
PLEKHN1
LBR
COQ3
NR3C1
ZBED8
CACNB3
RASD1
AGBL2
SWSAP1
AP5Z1
EDEM1
CCNB2
GABARAP
GCAT
SRCAP
LOC730183
MAP4K2
SPATC1L
PURA
PPOX
IFITM5
THAP3
PELO
ITGA1
UNC45A
PHIP
ZBTB38
SLC35A2
TEX22
MXD1
VPS13C
TMEM267
MRPS28
NOXO1
TFAM
PITPNM2
H3C12
COQ7
MPHOSPH8
MKNK1
H2BC10
ARMC7
RBMX
DNASE1L2
DCK
TMEM101
COMMD5
MRPL12
ZNF720
B3GNT9
PGAM2
ACLY
HYKK
LRP6
ZNF335
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
ICE1
IPO13
VDAC2
RWDD1
NME6
OAZ3
MRPL9
C19orf48
REXO1
MRPS7
GGA3
LYRM4
FARS2
PSMD12
SLC35B1
SUCLG1
ZNF576
IRGQ
NCLN
HSPA9
EFTUD2
CCDC103
SUDS3
CAPRIN1
UBE2I
RBBP5
PSMG2
CEP76
UPF2
GOSR2
POLR2E
EXOSC5
BCKDHA
DCTN1
VARS1
BLCAP
NUP205
MRPS5
HADHB
HADHA
STAM2
PSMD1
ACTR10
CDC73
COX7A2L
POLR2J3
COMMD1
CCT4
STAM
PAK1IP1
C6orf52
TSNAX
SEC61B
ALG2
SUPV3L1
SART3
ISCU
PI4KB
RABGGTB
SKP1
USP1
PDAP1
BUD31
PES1
NDUFA4
PTGES2
ZRANB2
PCBP1
FARSB
ATP5MG
KMT2A
RPL21
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
EIF4ENIF1
BRWD1
PNO1
EIF2S3
DDX39B
MRPL24
PDHX
APIP
VPS9D1
AXDND1
BAG6
PCBD2
GADD45GIP1
TMED1
RPS27A
CLHC1
ANAPC7
GOLGA5
RCOR3
TBCK
AIMP1
MRPL38
RXYLT1
ECI1
MRTO4
EMC1
SMC2
LAMP1
YJU2
RHOT2
H3-3A
TTC8
RPS23
ATP6AP1L
PIN4
GLRX2
DPH6
GTF2IRD2B
NDUFA10
GTF3C4
DDX31
FAM104A
C17orf80
BICRA
RPL35A
IQCG
RABGAP1
KIF27
ATXN2
RBKS
BABAM2
DENR
TSC1
GFI1B
CALM2
CNPY2
BCAP29
MEMO1
POLR2C
RPL7
RDH10
GAGE2C
GAGE2B
GAGE2A
DENND4B
ENAH
CDK12
PACS1
RPN1
GINS2
ADNP
ROGDI
SFT2D3
PATZ1
LRRC37A3
PROSER1
NHLRC3
TMPPE
GLB1
SAMD1
PAXBP1
RPS12
H2BU1
ANKLE2
PNRC1
OTUD7B
TBC1D13
PAF1
TRIM45
ATXN7L2
STMP1
SF3B3
COG4
C7orf25
AP3M1
MTMR10
DPY19L4
HSPA1B
NAXE
WDR74
EIF2D
MORC3
DNAJC21
UFM1
DRAP1
C11orf68
NPRL3
C8orf37
TRMU
ZNF398
ZNF341
MT2A
LONP1
CATSPERD
SETD5
METTL8
DCAF17
NUDT16L1
TARS3
ZBTB2
XPNPEP3
ST13
CMTR1
RASA4B
CUL9
POLDIP3
TP53BP2
RICTOR
TRIM3
H2AW
OVCA2
C8orf82
TLE3
RUVBL1
CTNNB1
DGKZ
C17orf75
HYI
MEPCE
CLK3
EGLN1
DERA
HNRNPF
YAP1
TFAP4
TXLNA
MTF2
PPP3CB
GBA
KMT2D
RNF166
CTU2
PHF10
ALKBH5
ACVR2B
FIGN
MORF4L1
ADARB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RRM2
COA6
ASXL1
RPS29
LRR1
NFAT5
RFX1
ZNF76
ATXN2L
KAT6A
ATAD2
HNRNPU
N4BP2
NDUFS7
STRIP1
CACFD1
LUC7L2
UFSP1
RAB23
KLF12
PRKDC
MCM4
CHAF1B
PRRC2B
NOTCH2NLA
KLC2
COMT
QSER1
DESI2
TRAP1
ZMIZ2
PMF1-BGLAP
PMF1
DIDO1
FAM199X
RUFY2
FBXL3
KIAA2026
B4GALT7
PCDH9
RAB4A
PKM
ZNF48
SMG5
CYB561D1
C1QBP
SQSTM1
PPP1R37
LRRC73
ZNF862
SIPA1
PCBP2
EEFSEC
PANK1
ZNF383
MTIF3
NOXA1
GDI1
FAM118A
IBA57
RIPK1
SMN2
SMN1
SLC39A13
AQP11
TRIM65
PRDX1
RRAGC
C1orf56
KAT8
TSPAN10
RABIF
NPLOC4
PRSS27
FANCC
CALM1
C2
RCC2
JAK1
WBP1L
RPL37
SMYD2
CDKN2A
ZNF451
PPP1CC
C16orf71
ANKS3
UNC119
MTHFS
POGZ
PAK2
GORAB
BNIP3
ZCWPW1
SGF29
NEIL1
NBPF1
ERCC6L2
PATJ
DIAPH1
SEC61A2
DNAJB12
FASTK
NCOA2
HOXA5
ACADM
IL10RB
COX19
MFSD14A
ATAD3A
AKT3
HIPK1
GFER
NFIB
NFATC3
UBA2
SF1
KANSL1
TNKS1BP1
SETD6
ETV6
ZFAND6
LMBR1
FARP2
MROH1
ZFP64
TAF2
MKRN2
ATPAF1
STIMATE-MUSTN1
STIMATE
TRAF4
THEM4
ARSG
WASHC2C
SSX2IP
SLC6A9
CHD8
SCAI
ING1
HNRNPUL1
B3GAT3
TMEM150A
NOTCH2NLB
SEMA4C
ECHS1
SORT1
FAM117B
ARPC3
SEMA4B
PHF8
ACBD6
LATS1
NCBP3
HMGN1
ERLIN1
CPSF1
CNP
AKAP1
NUB1
TPTEP2-CSNK1E
KDM3B
CHD1L
MYNN
PRR7
NAA35
IREB2
NOTCH2NLC