ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018228 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◣ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H3C15
H3C14
COX20
VPS28
VEZF1
DNAJB14
B3GALT4
RRP36
ZC3H10
IDI1
SYNRG
FAM174C
NECAB3
SGSM3
POLR2J3
SCRIB
H4C15
H4C14
VPS9D1
EDC4
KMT2A
ZNF34
POLG2
ZNF580
DONSON
SEC31A
DVL2
TLCD1
INPP5E
JMJD8
EPN1
SNAP47
H3-3A
DPH7
CHMP2A
MAZ
C17orf49
CUL7
TARS3
SNAPC5
ENAH
OTUD7B
PCDH9
PIP4K2B
PRRT2
NUMBL
HYI
TMEM132A
MMP24OS
MMP24-AS1-EDEM2
GPAA1
DNAJC9
ZNF862
NANOS1
ADNP
NRAS
RIT1
AKAP8
ZNF513
GGA2
H1-4
H2BC5
ADARB1
DYRK1B
ANKRD54
TMEM230
AMDHD2
ABTB1
GTF2IRD2B
ZNF653
CABYR
BCAP29
ORAI3
HNRNPU
SUMF2
C18orf32
MEMO1
GCN1
NAXE
PCNX2
MTHFS
H2BC21
H2AC20
H2AC21
MTRF1L
MAN2C1
HIPK1
RAB4A
CTNNAL1
CHAF1B
SECISBP2
ACADVL
FNBP1
NUDT4B
TAF10
RCOR3
SDCCAG8
CEP170
PYGO2
LOC101928120
RRM2
CD68
ST3GAL3
CXorf38
SH3BGRL3
BMI1
SLC25A10
ZNF865
CCDC138
PRR7
STIMATE-MUSTN1
STIMATE
H3C13
H2BC18
TOM1
FOXP1
AKAP5
MAML1
POGZ
WDR48
SCN11A
DENND4B
LMBR1
FBXL3
ATP5F1E
PPP3CB
ECI1
PRRC2A
MORC3
SYCE2
DHRS11
FAM199X
AKT3
VANGL2
KIF27
MORF4L1
SMIM19
SLC20A2
NCOA7
RUFY2
SCO2
SEC61A2
PABPN1
SRSF11
MRPL40
HIRA
PPFIA4
KLF12
GPR180
ZNF398
GPS2
KRBA2
C7orf26
LAMTOR3
AGK
ZFAND6
MAPK8IP3
C6orf226
EXOSC6
DPY19L4
ADCK2
RABGGTA
SIMC1
CACFD1
NCAM2
FAM76A
SPATA1
GNG5
PCBP4
LATS1
C17orf75
STC2
PEX7
RNF139
H2AC19
H2AC18
PANK3
HOXA4
ATXN7L2
HMGN2
LRRC37A3
RBM26
FAM219B
IL10RB
ZNF326
SLC25A42
KDM3B
AGO3
PHIP
EDEM1
RABGAP1
PHF1
FLOT2
KAT6A
ACBD6
TBK1
TIMM13
SMYD2
NBPF1
FSTL3
KANSL1
ARHGAP35
STRIP1
SCAI
LSS
EPB41
PRRC2B
GPX1
B3GALNT2
OPN3
CHML
FAM131A
H3C2
TM2D3
SLC25A22
REV3L
SLC44A5
H2BC11
H2AC11
DERA
ATXN7
CELF1
UBXN2A
POMT1
DESI2
ZNF197
TADA1
CLK3
EGLN1
NME3
CIRBP
POMZP3
USP21
PDCD2
CNIH4
H1-2
SOD2
NDUFB2
ZNF445
ACBD3
BOLA3
ATPAF1
KANSL3
HFM1
ADIPOR1
H4C5
ZNF581
SLAIN1
TMEM179B
ADAM17
ATAT1
DAPK3
POLR2C
PACS1
SKIDA1
MSI2
CD320
STMP1
NOXA1
ARHGEF11
CCZ1B
PPP4R2
BACH1
EPM2A
PLPP5
TRIM65
NEIL1
AKT2
HDAC10
YBEY
MCM3AP
KMT5B
ZNF148
KIAA1522
UCKL1
NDST2
NUB1
ABL2
TRIM3
BRAF
PXK
SCAMP3
RHOU
EFCAB2
FUT11
TP53BP2
FARP2
C8orf76
WIZ
TMEM35B
DDX59
PHACTR2
PEX6
C1orf21
WDR37
C8orf82
SEC22C
NKTR
NOTCH2NLC
IKZF4
OCRL
FOSL2
UNC119
DENND2B
TTC21A
GORASP1
KCNJ4
MLLT6
ACADM
SSRP1
TOMM20L
NFAT5
TBC1D5
TBC1D10B
MYLPF
E2F3
TPTEP2-CSNK1E
ARFGAP2
PRKAG1
C5orf24
WDR27
C6orf120
SRSF4
GDI1
PYCR2
PRKAG2
GGPS1
ARID4B
LRRC61
ACTR3C
DISC1
ARL5A
TSPAN10
NPLOC4
GOLGA1
RNF220
CLN5
LRRFIP2
TMEM184B
RAD23A
BAG2
VARS1
CISD3
LIN9
CAMTA1
FAM20B
TIRAP
SATB1
TPGS2
PATJ
E4F1
MAN1A2
MARCHF7
COX5A
DNAH14
WDTC1
TRAPPC8
MIER1
LIX1L
MOV10
TRMU
FAM118A
PARP1
ICA1L
B4GALT7
KMT2C
AP1S2
TPK1
CZIB
THAP9
ZNF621
KCTD3
H4C3
IMPDH2
JAK1
RAP2C
ZNF786
CMTM6
C19orf53
LMO7
MYBL2
NADSYN1
ZNF341
GPR137
TRAF4
GTPBP3
ANO8
MAP3K2
MKRN1
COPS7B
TICRR
KHDRBS1
ZNF35
SMARCD2
MPC2
EXOG
DCAF6
BTBD1
LRRC24
MPP5
REEP2
ZNF76
URB2
TAF5L
GET4
SRCAP
LOC730183
FASTK
GAB2
SIRT7
RAD54L2
CDC42BPA
SP1
NF2
EYA4
ARID3B
ZNF771
PHC2
THRB
SP3
VPS36
ATRIP
HEBP2
SNX5
MGME1
TBXAS1
HIPK2
TM7SF2
PRKRIP1
PURA
NUDT16L1
TXLNA
ROM1
EML3
GATAD2B
ACAT2
LRRC37B
YWHAZ
PITPNM2
PAM16
PSMA4
DOCK7
CAPZA2
POM121C
HNRNPF
CCSER2
MRPL28
CAPN7
CCSAP
HGSNAT
SLC37A3
FOCAD
RILP
CCDC130
SQSTM1
RABIF
PPP1CC
MAT2B
EZH2
MGAT4B
DNAJC11
PIP5KL1
TAOK2
TLL2
UBA2
SETD6
ERLIN1
CUL1
BRWD1
MTARC1
DSG2
CD276
SETMAR
AMMECR1L
GANAB
NCKIPSD
PUM2
CSTB
NAT10
GPC4
GTF2I
TBC1D4
LLGL2
CSKMT
C11orf98
SPECC1L
PCBD2
TIGD3
ZNF77
KANSL1L
ZBTB37
SAMD1
THAP3
DBN1
STK40
URGCP
URGCP-MRPS24
OVCA2
LRRC73
CHUK
ZNF706
XYLB
KIAA2026
IQGAP1
TTC13
GMPPB
TFAP4
FBXW2
KIF23
NID1
MRPL38
IBA57
ARHGEF12
RC3H2
HOXA3
PDE4DIP
ATXN10
CD2AP
EIF3CL
EIF3C
MAD1L1
UNC119B
MSRB2
PHGDH
CACNA2D3
GPN2
GFER
NUDT4
STX6
DHX9
SUMO2
MAPK8IP2
CCDC107
PTCH1
TSEN15
STAU1
ELOA
LPGAT1
PBRM1
GNL3
PWP2
LOC102724159
RIPK1
RPL6
PTPN11
GALNT2
NUAK1
FAM149B1
ECD
PDE8A
AQP11
USP6NL
SCFD1
VWA7
IAH1
PHF19
PAFAH1B1
UBA3
FBXO10
NMD3
RUVBL1
EEFSEC
MFSD14A
SEMA4B
ACTR8
YBX1
UTP4
DERPC
CHTF8
STX7
RALGDS
THSD1
TMPPE
GLB1
CELSR3
SETD5
SPSB3
MIB1
HDLBP
KLHL25
NOMO3
SEPTIN2
NOMO1
FYN
DENND11
GCLC
YWHAB
H4C2
SSX2IP
VPS26A
TRIM52
CIZ1
ACTN2
GINM1
DNM1
ATXN2
JPT2
MARCHF6
MYCBP2
BCL7C
ZNF644
SNX7
RTN4
PCSK6
ATXN7L3
TAOK1
KCTD18
OSBPL1A
FPGS
ANKRD36B
ZNF282
SBNO1
ZNF860
OSBPL10
H3C4
H2BC7
H2AC7
NCOA2
FAM207A
UNC5A
TAB2
MBOAT2
LMNB1
RFX1
POGLUT3
NMB
NANS
TPM4
IMPACT
CAPRIN2
DCUN1D4
ZNF629
IL13RA1
SH3D19
DCT
GAGE2C
GAGE2B
GAGE2A
LONP1
CATSPERD
NFKBIA
CYREN
SLC44A3
ZDHHC21
C1orf198
TTLL4
COG2
CEP350
ZMYM4
DGKH
PRC1
DTNBP1
DEK
UBE2R2
ROGDI
CUL9
CTNNB1
ZFYVE9
SMARCB1
MGRN1
PRKD3
RANBP17
TLE4
UBE2J1
FGF18
RNF180
FAM135A
NXF1
FDX2
NFIB
PRKACB
FAM53C
CDC25C
AKAP13
MAP2
RAP1A
MYL6
NPRL3
RPP21
RNF135
SRF
FANK1
VARS2
SELENOH
N4BP3
H4C4
RALB
STUM
MOCS2
DIS3L
LRCH2
B3GAT3
ARSB
SH3GLB1
MNX1
TMEM121B
DDX17
RNF187
NUCKS1
RHOBTB1
STON2
POLR2D
GTDC1
RNF217
ZBTB2
TLK1
RP9
NLRX1
NPM3
CSRNP2
DRAP1
C11orf68
DEGS1
CBX3
NADK
VDAC3
RASL10B
TNFRSF13C
MLXIP
TLCD3A
ZMYND11
SLC22A23
TRIB3
TUBB2A
STOML1
HNRNPAB
HIVEP1
SP2
MRPL41
MAPKAP1
EIF2D
HSPG2
RNF38
THAP12
GVQW3
ATP1B1
MRPS24
MTMR3
PHLDB2
FAM228B
SF3B6
HAGHL
MTX1
TIGD1
EIF4E2
THBS3
NOM1
GALNT11
NGLY1
SLC12A5
WIPI1
ZER1
SGPL1
ZNF384
TDRD7
PDXDC1
BMP2K
HNRNPA3
RALA
TMEM120A
CEMP1
PDCD4
RPAP3
PKNOX1
FEZ2
SMARCC2
PIAS1
ZFR
RTN1
MAPKAPK2
CNOT11
STYX
KIFBP
SBF2
TMEM129
TACC3
KCTD1
BMP8B
MRTFA
FAM122C
FAM122B
UPF3A
SPTSSA
NEK7
B4GALT6
CKAP2
HUS1
C14orf28
CDH24
SLC12A6
NR1D2
NKIRAS1
BPTF
ZBTB44
STX17
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
DIPK1A
SPATA9
RHOBTB3
HP1BP3
BAZ1B
HPCA
ADAP2
ZBTB12
SFT2D3
C2
FOXJ3
NEXN
HLCS
NPTN
DLK2
KIF7
SRA1
ADSS2
ZNF740
CSAD
SRSF10
PHC1
JUP
VANGL1
NCKAP1
UBE2A
KAT2B
NPHP3
VTI1B
CALM1
SORT1
CHD1L
ZNF652
TATDN2
TOR1B
SOCS1
GSN
RAB14
ZNF24
METRN
SPATC1L
SPOUT1
HMGN1
ING5
SPIN1
UBTD2
C9orf40
CORO1B
PITRM1
PRRG4
SMARCA1
FZD2
MED14
PRKAA2
CEP120
TET2
SCAPER
PTBP1
HOMER2
IGF1R
ZNF584
KAT8
SLC26A6
DEDD
PRPSAP2
PRPF40B
PGBD5
DUSP14
TOP2B
ZBTB24
PRSS23
VRK2
NRIP1
EIF4ENIF1
PNMA1
MIF4GD
ACOX3
ZBTB20
SEC16A
C9orf163
GPAT4
CCDC71
CFL2
MIA3
SREBF2
COX19
DPY19L3
PSMD3
ELAPOR2
C1orf115
EOMES
DSE
SH3GL3
SPAG9
MTG1
RCCD1
GDPGP1
CIB1
C18orf21
CLSPN
ARL8B
CCDC77
SDC4
KDM5A
AKTIP
ZBTB8A
TMEM267
PSEN2
TARBP1
RAB11FIP2
FAM117A
MCOLN3
ZNF41
SURF6
C7orf25
LUC7L2
TULP3
SERPINB1
XPR1
KIAA0232
ARFGEF2
OMA1
DAB1
PAFAH1B2
UBE3C
KIAA0895
XPC
LSM3
EZR
U2AF1L5
U2AF1
MARK2
GNG4
ZNF879
EDARADD
DHX30
RPP38
PDE4B
NDUFS3
KBTBD4
TBC1D13
PANK1
SLC35A3
OTX1
SGK3
SMAD5
SOS2
PFN4
NIT2
ROBO2
ACLY
HSF2
TSG101
KBTBD8
FA2H
HDGF
EBPL
TLE3
PHTF1
UBP1
MGAT1
JARID2
MPND
SUFU
DENND1B
YTHDF2
LARS2
ACTR2
H2BC4
H2AC6
H2BC13
H2AC13
MFSD3
ATXN2L
ZKSCAN2
MAP2K7
CREBRF
ATXN1
SRSF7
INPP5K
FAM83E
DECR2
DIAPH1
RRP8
ILK
OTUB1
CDC42EP4
APPL2
DENND6A
CHPF2
CENPV
CDR2L
PTPN9
PDF
CCDC88A
PPP1CA
MAPK1IP1L
UBE2Z