ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441335 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◣ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

RABL2B
RABL2A
TSN
ZNF335
MAPKAPK5
DYNC1LI2
SRD5A1
NUP85
CACTIN
VDAC2
REXO1
POLR3F
DZANK1
PSMD12
ICE1
IPO13
OAZ3
MRPL9
RWDD1
NVL
CAPRIN1
NME6
HSPA9
NCLN
MRPS7
GGA3
POLR2E
GOSR2
ZNF576
IRGQ
SLC35B1
EFTUD2
CCDC103
SUCLG1
PSMG2
CEP76
C19orf48
LYRM4
FARS2
UBE2I
UPF2
DCTN1
MRPS5
ACTR10
COX7A2L
VTI1B
PSMD1
SUDS3
COMMD1
CCT4
BLCAP
EXOSC5
BCKDHA
VARS1
STAM
RBBP5
CDC73
SEC61B
ALG2
RABGGTB
SART3
ISCU
SKP1
PTGES2
STAM2
HADHB
HADHA
TSNAX
USP1
PI4KB
PES1
ATP5MG
ZRANB2
SNAPC5
PDHX
APIP
TAF9
RAD17
AK6
RPL21
EIF2S3
NDUFA4
FARSB
PDAP1
BUD31
PAK1IP1
C6orf52
SUMF2
C18orf32
NUP205
PNO1
MRPL24
SUPV3L1
SELENOF
HS2ST1
POLG2
B3GALT4
AXDND1
VEZF1
ZC3H10
TM9SF1
RPS27A
CLHC1
TMED1
PIN4
EIF4ENIF1
GADD45GIP1
DDX39B
ATP5F1E
ANAPC7
SMC2
GOLGA5
GCN1
C6orf226
DPH6
BAG6
RPS23
ATP6AP1L
RPL35A
IQCG
MRTO4
EMC1
RXYLT1
EPN1
BICRA
ANKLE2
EDC4
RIT1
FAM131A
HSPA1B
TTC8
SCRIB
AMDHD2
COX20
DVL2
SECISBP2
RPS12
FLOT1
FAM104A
C17orf80
RBKS
BABAM2
NRAS
DNAJB14
KRBA2
H2BC4
H2AC6
TBCK
AIMP1
PCBP1
NDUFA10
H4C15
H4C14
AKAP8
UFM1
TLCD1
WDR90
ZNF383
MRPL38
H4C12
PAF1
TBK1
C19orf53
MAZ
CD68
DAPK3
TMPPE
GLB1
SF3B3
COG4
BAZ2A
RRP36
CNPY2
RNF166
CTU2
DGKZ
ADK
PROSER1
NHLRC3
AP3M1
GRAMD2A
RPS29
LRR1
LAMP1
TMEM132A
TIMM13
PCBD2
RPN1
ROGDI
ZNF34
NANOS1
GTF3C4
DDX31
SEC31A
NAT10
H4C11
XPNPEP3
ST13
DENR
GET4
CDK12
H4C3
CUL7
SYNRG
NAPRT
DNAJC21
OSGEP
APEX1
GLRX2
ECI1
NOLC1
DPH7
PRKAG1
UPF3A
INPP5E
CHMP2A
H1-2
CCDC34
MAD1L1
ALKBH5
MYG1
FBXO4
SIRT7
XRN1
PKD1
AHRR
RHOT2
GORAB
PHF1
ATAD3A
ARHGAP11A-SCG5
ARHGAP11A
VPS28
PRRT2
POLR2C
H3C15
H3C14
FDX2
TTC33
RPL7
RDH10
CMTR1
GBA
SPATC1L
POLDIP3
POLR2J3
NDUFB10
EIF2D
STK36
RNF25
SYCE2
PNMA1
MSH4
ATAT1
DHRS11
RAD23A
IMPDH2
MEPCE
ZCWPW1
SRSF11
LRRC40
C5orf24
THOC5
DNAJC9
CCDC138
MLX
JMJD8
SEC11C
H2BC21
H2AC20
H2AC21
MAPK8IP3
NDST2
NPM3
ERCC6L2
UFSP1
RPS10-NUDT3
RPS10
CISD3
MATR3
PRDX1
BTBD10
NDUFS3
KBTBD4
SLC25A10
DRAP1
C11orf68
ZNF341
MAP2K2
SCAMP3
HAX1
SELENOH
CRTC2
EXOSC6
TRAP1
SMIM27
TOPORS
ZMIZ2
ZBED8
MCOLN1
MAN2C1
ARFGAP2
NUDT16L1
TOM1
VPS50
HEPACAM2
COMT
PRKAA1
CLUAP1
MLST8
H1-4
NME3
CUL9
DOHH
NDUFS7
TRIM65
RBM4
MAML1
KLHL11
COX18
USP21
RABGAP1
RPS19
H3C13
H2BC18
C17orf49
ZNF251
TUSC2
CDH24
STYXL1
NOP2
DUS1L
SRRT
GTF2H2C_2
GTF2H2
GPAA1
ARF3
ASXL1
MOV10
BAG2
GTF2A2
RCOR3
SPCS1
GLT8D1
TNKS1BP1
TRMU
H2BC5
SGSM3
ZNF76
OSTC
H2BC12
H2AC12
PYGO2
LOC101928120
TCF3
RHOF
TMEM230
EIF4H
MDP1
MRPL40
HIRA
PUF60
DERA
COX19
MMP24OS
MMP24-AS1-EDEM2
ACTN4
METTL9
DRG2
RICTOR
BNIP3
ZBTB4
POLR2A
EHMT1
DENND4B
TUBGCP6
RUVBL1
EEFSEC
LMAN2
RPL27
PMF1-BGLAP
PMF1
SLC39A13
GFER
FZR1
HMCES
TRIP13
BRD9
RPS15A
PPP4R3B
DHPS
ROPN1L
SMG5
HSD3B7
RCE1
PDCD6
MXRA7
CHD8
MAF1
CDK16
VPS4A
SELENOO
CXorf38
SLC50A1
ANKFY1
FUT11
DPY19L4
CCDC88A
FBXW9
MBD3
ABCF3
LRRC37A3
MFSD14A
PHLDA1
PACS1
EGLN2
H2BC17
H2AC17
WDR24
RRAS2
H2AC19
H2AC18
ENOSF1
JAG2
ADAT1
MED26
TXLNA
GGA2
C7orf25
MTF2
B4GALT7
PPFIA4
RPL37
DIAPH1
PITPNM2
ECHS1
RARS1
IMPA1
PSMD5
FAM174C
NECAB3
RILP
RAB5B
ALDOC
MTRNR2L8
C8orf82
STYX
TMEM267
GDI1
AURKAIP1
USP3
SURF6
WDR73
GPS2
PIM2
TIGD3
H4C2
SRRM3
TMEM101
FAM189B
IFI30
ZBTB45
GAA
ADPRHL1
TUBGCP5
HOXA5
H4C8
ZNHIT2
TMEM150A
H4-16
MKRN2
B3GAT3
SNAP47
PCBP2
JMJD4
TRIM52
H2BC11
H2AC11
CS
SETD6
C5orf15
SLC26A11
SGSH
C12orf73
CENPBD1
TSR3
GNPTG
RAB26
VPS9D1
H3-3A
AGO3
BCAP29
NOTCH2NLA
SMN2
SMN1
TOR3A
NT5C
NPAS4
JRK
TYSND1
COA3
CNTD1
NCBP3
COPRS
VCP
MLLT1
HSD17B8
RECQL4
LRRC14
H3C2
TAF10
ARSG
TOMM20
PPP1R37
WDR83
MAN2B1
TELO2
CYB561D1
TEDC2
ZNF131
EFNA4
IFI35
CYC1
CPSF1
ADPRS
ZSWIM8
TMEM43
CHCHD4
ATXN2
INKA2
DDX20
PNKP
FAM83E
CTNNAL1
NOL7
CIAO3
MIF4GD
CYBA
SLC24A1
INTS14
C6orf47
NUDT15
H4C9
ATAD2
UBA2
SLC39A3
C17orf75
TSFM
TATDN3
NSL1
FAM222B
ANTKMT
MIEN1
LRRC8D
WDR11
RPL12
LRSAM1
H3C4
H2BC7
H2AC7
TSC1
GFI1B
BUD13
GTF2H2C
CYTH1
PEX12
VWA7
NSFL1C
RGL2
INPP5K
NOTCH2NLB
FBXL20
RSAD1
SNRPE
MRPL12
RUFY2
NELFB
UBA52
TCF25
PAM16
PDCD2L
ZNF35
SLC12A6
PPP1R15B
NFYB
TMCO1
UCKL1
C7orf26
TBCD
TAF9B
PSMC3IP
ELL
COPB1
ITGB3BP
EFCAB7
CLK3
ZNF451
ABCA7
MRPS28
BICD2
MTARC1
BAX
KMT5B
CDK11A
SPOUT1
SAMD1
KAT5
C16orf71
ANKS3
ZBTB22
ARMC7
SF3A3
TIPIN
STX16
MTHFS
ERCC5
UBE2Z
TCHP
PSMG1
BRWD1
VMAC
NDUFA11
ATP7A
PIP4K2B
ANKRD12
STRIP1
SP2
PTCD1
CPSF4
SSBP1
OTULIN
PCYT2
MTREX
DHX29
NFAT5
ATPAF1
MBTPS1
C8orf33
H4C5
CCDC97
WASHC2C
CNP
ADI1
ARL6IP1
ZNF346
UHRF2
GTF2IRD2B
TAF2
NR1H3
HASPIN
ACP2
LENG9
SKA3
MRPL57
IDI1
TUT1
CHUK
TMEM222
MRPL58
CLN6
NUF2
DHRS13
LSG1
WDR27
C6orf120
SFXN4
AXL
FAM228B
SF3B6
FECH
C16orf46
C12orf57
ANKRD40
KIFBP
CLPTM1L
PLK1
ABTB1
POLD1
CSRNP2
TMEM223
GTSE1
CDK5R1
MPG
DDX56
CEP72
SCAMP5
CCDC24
H3C8
TRMT2A
RANBP1
QRICH1
DCAF10
CCDC43
DNAJA3
TAOK2
SLC25A42
ROMO1
NFS1
CHMP6
SEC62
SLC25A17
PRSS27
HNRNPH3
PPP4C
STAT3
WDR70
PBLD
IARS1
PRKRIP1
CD320
THEM4
CCNT1
PAFAH2
DYRK1B
ZZZ3
LOC100287896
LIPT2
CASP2
PHKG2
RNF40
CCDC189
DPP9
EXOC3
ARHGEF35
SSH3
MARCHF7
AMACR
CCDC169-SOHLH2
CCDC169
GEMIN7
SENP1
PFKM
EHBP1L1
PGM1
INTS5
FBXO31
MAP1LC3B
IREB2
TBL1X
FIS1
TAF1D
C11orf54
GMPPB
TBC1D13
ZC3H6
MRPL44
NOL11
SRA1
RFX1
RNF187
MSTO1
DCXR
CLCN7
AHCY
ZDHHC8
TIGD6
HMGXB3
STXBP4
COX11
H4C1
H3C1
NXF1
LRP6
NAXE
GPX1
MRI1
FRA10AC1
COQ7
HEXD
DMAP1
YAP1
FAM207A
MAPK1IP1L
IL11RA
KIAA2026
WDR47
CYB561
TRIP4
MRPS23
PGS1
SF3B4
ELK1
ANAPC4
POM121C
PWP2
LOC102724159
PRKACA
SMIM13
EEF2KMT
USP30
NOC4L
DDX51
GSTO2
KMT2D
SMARCD1
SCAP
METTL2B
UBB
SCO2
MST1
TOB2
SDHA
CCDC127
RMND5B
SPAG5
CHST14
TRIM37
LUC7L2
FAM219B
KDM3B
SLC35A3
C6orf136
AGL
ZNF513
ACTR8
MRTFB
MRPL55
NDUFS6
NIPBL
WDR6
RIPK1
IPO9
ZNF668
ZNF646
ISG20
MTIF2
POMZP3
RASA4B
TSPAN10
NPLOC4
SPSB2
NDUFA6
RPS15
MADD
ARPC3
ELK4
AP3S2
SUOX
SPRTN
EXOC8
GRB2
TVP23B
PDPK1
TTLL3
JPT2
ZNF414
RFC4
MRPS36
ADNP
TFPT
PRPF31
DIDO1
MROH1
PDE4DIP
COMMD2
MBD1
EHD1
ZMPSTE24
ZNF446
LLGL2
LARP1
EIF4A1
ARHGEF1
RRP8
ILK
NEURL2
CTSA
UNC119
MOB4
PEA15
IL3RA
H2BC8
H2AC8
TXN2
FARP2
SH3D21
AP2M1
WDR55
NR4A1
SUPT16H
EIF4G2
ZNF622
SCFD1
ARL6IP4
POP5
NUB1
ZNF696
TOR1AIP1
TAB1
ARNTL
TAS1R1
NOL9
LPCAT1
BANP
METTL26
DNAJC14
KMT2A
TM2D3
FAM20B
TMF1
DR1
PSMD2
LSM14A
HGH1
SEC22B
PYCR3
SH3BGRL3
SNX14
RBAK-RBAKDN
RBAK
SUGCT
MPLKIP
APPL2
NDUFC2-KCTD14
NDUFC2
PABPN1
ST3GAL3
SORT1
DSTYK
NCKIPSD
LRRC61
ACTR3C
ABCA3
KDM4B
AP5S1
STX5
GPN2
VARS2
CELF1
URGCP
SFT2D3
PURA
SIPA1
RABIF
NBPF1
POR
DYNC2I2
KANK2
UBE2D4
ATP6V0B
YBEY
MCM3AP
NME2
NAA60
ENDOG
PHKA2
ZSCAN21
NME1-NME2
NME1
HPSE
ATXN7L2
ZNF398
SSRP1
ARHGAP29
LUC7L
FOXRED2
CTXN1
PDCL3
SLC35D2
COQ3
CZIB
TMEM14B
STRADA
HNRNPL
DYNLRB1
DUSP3
CBX2
WDR36
CTSZ
GNE
RBL1
XPR1
HP1BP3
PGAP2
RHBDF1
PCYT1A
TTC26
FLAD1
LRP2BP
ANKRD37
SLITRK5
MDM4
TOMM6
C1orf53
XXYLT1
ZNF787
SERINC2
NUCKS1
SERINC4
HYPK
PPP5D1
CALM3
PHTF1
RBM4B
SETD1A
H1-5
H2AC16
LTBP3
DECR2
PRMT3