ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448666 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◣ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
H2BC4
H2AC6
MTRNR2L2
SYCE2
ZC3H10
DHPS
C6orf226
H2BC11
H2AC11
PHF1
H1-4
H2BC5
H4C12
DVL2
EPN2
SLC38A2
B3GALT4
DALRD3
FLOT1
H2BC12
H2AC12
H4C3
CHMP2A
MTRNR2L8
C19orf53
CCDC85B
C18orf32
H3C15
H3C14
H2AC19
H2AC18
ZFP36L1
H4-16
KRBA2
EDC4
H4C2
E2F3
MSH4
SUMF2
H4C11
DNAJC9
NADSYN1
SYNRG
JMJD7-PLA2G4B
JMJD7
SCRIB
MAZ
ATAT1
NRAS
SNAPC5
NAT14
H3C7
PRKRIP1
VPS28
H1-2
MRPL53
PDE4A
H2BC21
H2AC20
VEZF1
COX20
POLG2
SIRT7
CAPNS1
ZNF34
RRP36
NAT10
KMT5B
H2BC8
H2AC8
ARFGAP2
MYG1
IRF2BP2
DDAH2
HMCES
FAM131A
CD68
ZNF580
STAG1
UBTF
AMDHD2
ZNF446
H2BC17
H2AC17
SNX14
KIF2C
MRPL40
HIRA
GPN2
FADS2
H2AC21
DNAJB14
GGA2
CSKMT
C11orf98
HMGN2
PRKAG1
PSMG1
CXorf38
INPP5E
ABTB1
CUL7
GTF2A2
C5orf24
ZBTB45
TUSC2
RIT1
H3C4
H2BC7
H2AC7
PHLDA1
IKBKG
G6PD
H3C2
H2AC4
FAM228B
SF3B6
AKAP8
RAD23A
WDR90
ZNF653
PRAF2
MST1
VTI1B
THOC6
HCFC1R1
PYGO2
LOC101928120
HSD17B8
PCBP4
CCDC107
FLOT2
MOV10
VWA7
WBP1
PNMA1
SECISBP2
PRRT2
CDK11A
PHF8
POMZP3
METTL8
DCAF17
TOB2
STUB1
PCBP1
JADE2
PATZ1
H3C13
H2BC18
CYRIB
WDR6
C6orf47
SCO2
THOC5
SH3BGRL3
H2BC15
H2AC15
ARL6IP4
H4C5
ROPN1L
NXF1
SCAMP3
TCTEX1D2
PDCD2L
DHRS11
SFT2D3
FIGN
EPN1
TEDC2
ACTN4
GSTO2
PWP2
LOC102724159
C17orf49
H4C1
H3C1
CCDC24
NOLC1
ELK1
LRRC24
CCDC34
N4BP2
RGL2
TLE3
MDP1
SP3
ZNF35
SRSF11
MAML1
DAPK3
MAD1L1
SRSF4
TRIM37
FUT11
QSER1
IGF1R
PNRC1
ING1
ANTKMT
TFAM
SPOUT1
MTA2
RCC2
LMNB1
COX18
FDX2
RSRP1
JMJD8
ZFX
SGSM3
LONP1
CATSPERD
C16orf46
NANOS1
H2BC13
H2AC13
H3C10
PNPLA6
CD320
MRPL28
GATD3B
GATD3A
H4C8
PIM2
ISY1-RAB43
ISY1
LRP8
MTIF3
HMGA1
DNAJB4
CDK16
KLHL11
RPS15A
NDST2
MATR3
DPH7
UCKL1
ETV6
SEMA4C
TRIM45
GPAA1
SNAP47
STYX
LARP1
H4C9
SLC25A10
BCL6
INPP5K
RSRC1
FANCC
POLR3D
H4C15
H4C14
TMEM230
XRN1
GINS2
SF1
DONSON
SCFD1
CENPA
YY1
FAM117B
ZNF782
GRAMD2A
LAMP1
RANGRF
GMPPB
CDH24
WBP1L
MYL6
TNS2
POLD1
SLC50A1
ADK
AJM1
SEC14L1
CEP192
SLC6A9
CDKN2A
GINS3
TOM1
IFRD2
SNX16
VGF
ARF3
TLCD2
PANK1
MAP3K1
ZNF581
ATXN2
PSEN1
ZBTB2
TAS1R3
WDR97
TIMM13
DYRK1B
ABCB6
TAPBP
MYNN
IMPDH2
ACVR2B
SMTN
MAPK8IP3
PAIP2
SPATC1L
BAG2
TYSND1
MTMR10
C8orf37
GANAB
TLL2
C1orf56
URGCP
URGCP-MRPS24
RAB23
CRK
PXDC1
CCDC138
ORAI3
TBK1
VARS2
C19orf71
NUDT17
FAM76B
CEP57
SERINC4
HYPK
DENND5B
SURF6
HDAC10
CALM2
RAB1B
RHOT2
PRMT3
SAMD1
PKM
AGO3
NPM3
TTC33
WDR24
ACOX3
GCN1
HAX1
MVB12A
PHF10
CYC1
C1QBP
CELF1
KIF27
PRKDC
MCM4
TRIM25
DMPK
PLEKHN1
LLGL2
MRPL12
SLC30A7
EXTL2
PIP5KL1
MLXIP
PXDN
ZBTB12
POLB
C12orf57
C2
PTP4A1
MYC
ZNF513
TMEM243
TMEM179B
ICA1L
SETD5
SGF29
MNT
DPP3
COX8A
VAV2
SELENOH
TXN2
TBXA2R
CTNNAL1
ROMO1
NFS1
OVCA2
CS
CRELD1
KLC2
BAZ2A
SREBF2
GPR137
HAGHL
CCDC78
PMM1
ATP5F1E
MMP24OS
MMP24-AS1-EDEM2
TAF10
SIX5
AQP11
BCAR3
TCIRG1
H3C8
ADHFE1
MLX
LRP2BP
ANKRD37
YAP1
PGGT1B
TGIF1
ADAT1
CLN8
PIP4K2B
FOXO3
HSF4
PCMTD2
NAPRT
CRTC2
PLPP5
SQSTM1
NME3
TTYH2
POLR2H
TLCD1
GTF2IRD2B
ANAPC4
LRP6
ABCA7
MTFR2
LRPPRC
EIF4A1
WDR74
FBXL14
LPCAT3
FAM83E
RILP
CCDC97
FBXW5
RASD1
USP3
UNC13D
ZNF217
DCTN6
DNAJC4
NEIL1
CDC6
LIFR
APTX
ENOSF1
SGK1
TAF9B
ZFP64
SEMA4B
GET4
VPS4A
HDAC7
FOSB
FBXO31
MAP1LC3B
NFIB
CYTH1
MROH6
MTCL1
NDUFS3
KBTBD4
FNBP1
ATP6V0B
HOXA5
LBR
TSFM
C16orf71
ANKS3
TAF4
EHBP1L1
DCAKD
PHF14
NARF
MACIR
GABARAPL1
ETV4
SRA1
SORT1
STXBP3
INPPL1
BCAP29
RNF225
RABGEF1
FASTK
RPRML
FUT8
GRK6
SLC25A6
FAM199X
KPNB1
ANKRD12
CHEK1
TAF2
STK19
DXO
TMEM132A
TUBGCP6
TRIM3
GABARAP
JOSD2
LDHA
CSNK1G1
AGAP11
SPRY1
CFD
AGBL2
RABGAP1
HYKK
XXYLT1
SLC9B1
CLIC3
ADAMTS10
ADGRF3
CCDC169-SOHLH2
CCDC169
TTLL3
SLC35A2
INO80D
CRACR2B
OTUD5
SRCAP
LOC730183
MIF4GD
C1QTNF6
RCE1
RBM4
PHIP
NFATC3
ARPC3
PPP1R15B
WDR62
THAP8
TPCN1
IQCD
PDF
ZBTB25
ZBTB1
PHPT1
RPS15
RHOQ
ATP6V1E2
SINHCAF
EXOSC6
SELENOO
STXBP2
TUBA1B
GPS2
SRRT
MAF1
DUT
TTC3
PIGP
TXNDC5
LRRC73
NAA35
SMAGP
SPPL2B
LSM7
TMEM151A
JPT2
MFN1
ARSB
MFSD1
ZSCAN31
ZNF865
FBXO4
RBMX
STMP1
NUDT16L1
TFAP4
MRM1
COA6
SSH3
FNDC3B
ARRB1
BRWD1
CCDC130
IAH1
FAM161A
RARS1
ELOVL6
C7orf26
C7orf25
HNRNPF
PAK2
GOLPH3
ERAP1
PCGF1
MADD
ZNF451
SENP3
DDX56
RHBDL1
ABCF3
VPS45
DNM2
SNTB2
PDE10A
POLR2J3
POM121C
ATXN2L
RRAGC
MPHOSPH8
RPL7
RDH10
SFXN4
PIDD1
TBC1D22A
SLC35E2B
SPIDR
LSM8
TRMU
ZNF584
FOS
CDC42EP2
NR3C1
MICAL3
ATF3
WNK1
SBDS
PITX3
PPIA
UPF3A
C8orf82
POMT2
GSTZ1
SEC14L2
COMMD5
DBP
GTF3C4
DDX31
FARP2
TSSC4
MRPL10
LRRC46
SPIRE2
LZTS3
C6orf62
SPTBN5
CISD3
RASA4
MFSD3
MCCD1
PIK3CA
DDT
FBXO22
NPRL3
SLC25A17
CYB561D1
ZC3H6
CSRNP2
NFE2L2
EBAG9
POMT1
HNRNPUL1
DOCK9
COQ3
TFPT
PRPF31
CELSR3
POLR2C
ZNF335
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
ICE1
IPO13
VDAC2
RWDD1
NME6
OAZ3
MRPL9
C19orf48
REXO1
MRPS7
GGA3
LYRM4
FARS2
PSMD12
SLC35B1
SUCLG1
ZNF576
IRGQ
NCLN
HSPA9
EFTUD2
CCDC103
SUDS3
CAPRIN1
UBE2I
RBBP5
PSMG2
CEP76
UPF2
GOSR2
POLR2E
EXOSC5
BCKDHA
DCTN1
VARS1
BLCAP
NUP205
MRPS5
HADHB
HADHA
STAM2
PSMD1
ACTR10
CDC73
COX7A2L
COMMD1
CCT4
STAM
PAK1IP1
C6orf52
TSNAX
SEC61B
ALG2
SUPV3L1
SART3
ISCU
PI4KB
RABGGTB
IDI1
SKP1
USP1
PDAP1
BUD31
PES1
NDUFA4
PTGES2
ZRANB2
FAM174C
FARSB
ATP5MG
KMT2A
RPL21
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
EIF4ENIF1
PNO1
EIF2S3
NDUFB10
DDX39B
MRPL24
PDHX
APIP
VPS9D1
AXDND1
NECAB3
SEC31A
BAG6
PCBD2
GADD45GIP1
TMED1
RPS27A
MAN2C1
CLHC1
ANAPC7
GOLGA5
RCOR3
TBCK
AIMP1
MRPL38
RXYLT1
ECI1
MRTO4
EMC1
SMC2
YJU2
H3-3A
TTC8
RPS23
ATP6AP1L
PIN4
GLRX2
DPH6
NDUFA10
USP21
FAM104A
C17orf80
BICRA
RPL35A
IQCG
RBKS
BABAM2
DENR
TSC1
GFI1B
TAOK2
PABPN1
CNPY2
MEMO1
GAGE2C
GAGE2B
GAGE2A
DENND4B
ENAH
DECR2
CDK12
SLC12A6
PPFIA4
PACS1
RPN1
ADNP
ROGDI
LRRC37A3
PROSER1
NHLRC3
TMPPE
GLB1
SLC25A42
TIGD3
PAXBP1
RPS12
H2BU1
NOL7
ANKLE2
OTUD7B
TBC1D13
PAF1
ATXN7L2
SF3B3
COG4
AP3M1
DPY19L4
HSPA1B
NAXE
EIF2D
MORC3
DNAJC21
UFM1
DRAP1
C11orf68
ZNF398
MAP3K12
GPX1
WDR27
C6orf120
ZNF341
MT2A
PURA
TARS3
SOD2
CEMP1
ZNHIT2
XPNPEP3
ST13
CMTR1
RASA4B
CUL9
ACADVL
POLDIP3
TP53BP2
RICTOR
H2AW
NUMBL
RUVBL1
CTNNB1
ST3GAL3
DGKZ
C17orf75
HYI
MEPCE
CLK3
EGLN1
DERA
GNE
CAMK2N2
TXLNA
MTF2
PPP3CB
GBA
KMT2D
RNF166
CTU2
ALKBH5
MORF4L1
ADARB1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RRM2
ASXL1
RPS29
LRR1
TMEM267
NFAT5
CCAR2
RFX1
ZNF76
KAT6A
ATAD2
HNRNPU
NDUFB2
NDUFS7
STRIP1
CACFD1
LUC7L2
UFSP1
KLF12
CHAF1B
PRRC2B
NOTCH2NLA
COMT
DESI2
TRAP1
ZMIZ2
PMF1-BGLAP
PMF1
DIDO1
RUFY2
FBXL3
KIAA2026
B4GALT7
PCDH9
RAB4A
ZNF48
SMG5
PPP1R37
ZNF862
TUT1
MCOLN1
SIPA1
PCBP2
EEFSEC
NOP2
ZNF383
NOXA1
GDI1
FAM118A
IBA57
RIPK1
SMN2
SMN1
SLC39A13
TRIM65
PRDX1
POP5
KAT8
TSPAN10
RABIF
NPLOC4
PRSS27
AK1
THAP3
FAM219B
CALM1
JAK1
RPL37
SMYD2
KAT5
AMZ2
PPP1CC
UNC119
ANKRD54
MTHFS
ZNF251
FAM156B
POGZ
GORAB
BNIP3
ZCWPW1
NBPF1
ERCC6L2
PATJ
DIAPH1
SEC61A2
DNAJB12
NCOA2
ACADM
IL10RB
COX19
EDEM1
TULP3
MFSD14A
MRI1
ATAD3A