ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: DRX028798 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◣ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Txndc11
Cldn34d
Rtn3
Gnai2
E030030I06Rik
Rnf44
Cdhr2
Inip
Nfib
Flcn
Uqcrh
Lrrc41
Gm10354
Tjp3
Pip5k1c
Fam53c
Cdc25c
Cln8
Gipc1
Aldh4a1
T2
Eed
Arntl
Cmc2
Cenpn
Phrf1
Med1
Cdk12
Nphp4
Kcnab2
Uchl3
Rita1
Ddx54
Ptcd3
Polr1a
Ptov1
Cenpe
Eif3b
Tcp11l2
Lrpprc
Hmox2
Nmral1
Med30
Rpl19
Cacnb1
Ephb2
Calm3
Taf15
Mmp28
Septin11
Madd
Wdr77
Atp5pb
Trir
Get3
Denr
Cnot6
Cwc27
Mrps11
Mrpl46
Slc2a5
Tardbp
Por
Cdiptos
Cdipt
Arid4a
Samd4b
Gmfg
Robo1
Ppp1r13l
Cd3eap
Tbck
Aimp1
Rab28
Crybg1
Caskin1
Pgp
Mlst8
Bricd5
Tst
Mpst
BC005537
Top2a
Sh3glb2
C1d
Miga2
Bzw2
Ankmy2
Olfml2a
Nr6a1
Tada3
Arpc4
Lsg1
Prkdc
Mcm4
Enpep
Aspn
Rpl22
Rnf207
Hyal2
Hyal1
Tusc2
Gnb2
Myh14
Gpsm1
Dgat2
Eif2ak3
Sash1
Pfdn4
Ift27
Arrdc4
Prkci
Hpcal4
Ttll7
Tmem129
Tacc3
Slbp
Cdca7l
Galnt10
Ott
Gm15107
Gm15085
Mia2
Il22ra2
Pkia
Tigd5
Eef1d
Arhgef3
Tbc1d17
Pnkp
Akt1s1
Asah1
Qrich1
Qars
Limch1
Fam227a
Cby1
Smc3
Gm17019
Zfp821
1700029I15Rik
Mapk8ip1
Tmem260
Uros
Bccip
Camta1
Bckdhb
Fut4
Utp18
Mbtd1
Zfp383
Zfp27
Ndufb1
Cpsf2
Apobec2
Psip1
Pawr
Rnasek
0610010K14Rik
Zfp687
Git2
Ankrd13a
A330070K13Rik
Fus
Cnot11
Paxip1
Atg12
Ap3s1
Dpp9
Cdt1
Aprt
Sos2
Wasf1
Cdc40
Sema4d
Otogl
Sharpin
Maf1
Cyc1
Taf6
Mblac1
Cnpy4
Gm35339
Rhbdd3
Abhd2
Ewsr1
Rarg
Srpk2
Fsbp
Slc41a3
Amotl2
4930558K02Rik
Pigc
Ankrd54
Ptcd2
Mrps27
Frat2
Tmem198b
Dnajc14
Kmt5c
Krt80
Tmem150b
Prdm10
Nol6
Pabpc4
Uchl1
Cct5
Atpsckmt
Prrt1
Ppt2
Trpm4
Hrc
Frat1
Hap1
Clnk
Oxr1
Cryge
Fgd4
Selenow
Zswim4
Psma8
Mat2a
Cdc42ep4
Slc36a4
Fzr1
Dohh
Smim24
Gm48552
Mbnl2
Cibar2
Myl3
Rmnd5a
Smim41
Atg101
Noct
Pknox1
Atrnl1
Gripap1
Iqch
Aagab
Atp8a1
Pik3r3
Ubald1
Mgrn1
Raly
Tspan4
Polr2l
Cd151
Jun
Axl
Junb
Hook2
Rlim
Hs3st3a1
Pias2
Tmem145
Prr19
Pafah1b3
Them6
Slurp1
Psca
Ces2a
Myo18a
Bnip3l
Ston1
Etv5
Gm7970
Ilf2
Uqcrq
Leap2
Gdf9
Tcerg1
Smg8
Tll1
Lmcd1
Cnot1
Kras
Bhlhe40
Gstm5
Hexim1
Rlbp1
Fanci
Tnrc6b
Camk2n1
Aicda
Dut
Zfp526
Dedd2
Hdac2
Oxgr1
Gm7244
Dnmt1
Uba1
Fbxo24
Lrch4
Bzw1
Matn3
Syngr2
6030468B19Rik
Sele
Paip2b
Map3k7
Ptdss1
Mterf3
Rel
Baz2a
Atp5b
Trappc3
Map7d1
Ttf1
Cfap77
Mbp
Mis12
Derl2
Inava
Papss2
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Maml2
Acox2
Cyp2j11
Trip10
Gpr108
Nectin3
Kctd14
Siah3
Map3k21
Rab11fip4
Tnnc2
Stip1
Ube2c
Ltbp4
Kctd2
Atp5h
Cd164
Skor1
Islr2
Pop7
Smg7
Gigyf1
Mug1
Mtch2
Cdca8
9930104L06Rik
Ciita
Rpgrip1
Hnrnpc
Rtkn
Wbp1
Ino80b
Zbtb4
Slc35g3
Polr2a
Sp2
Shc4
Pcdhgc4
Pcdhgc3
Pcdhgc5
Dnm2
Sec23b
Rbbp9
Zfp94
Avpi1
Traf2
Slc4a8
Rassf6
Tepsin
Ndufaf8
Eif4a3
Card14
Fbxw4
Ppm1l
Ly6g6f
Abhd16a
Rbm39
Arhgef1
Cd79a
Ddx46
Caml
Papln
H2-DMa
Brd2
Etnk1
Cenpp
Wasl
Zfp469
Cap2
Xrcc1
Pinlyp
Cttnbp2nl
4930564D02Rik
Slc35e3
Traf6
Myl12a
Cxcl11
Sspn
Smim4
Nt5dc2
Wrap53
Trp53
Nasp
Sdcbp
Mynn
Actrt3
Timeless
Mip
Gde1
Ccp110
Fchsd2
Ldlrad3
Nfe2l3
Was
Fam53b
Tpbg
Sp1
Fos
Shc1
Flad1
Cks1b
Lenep
Rnf5
Agpat1
Ager
Col9a1
Cd69
Rfx1
Cap1
Sting1
Lamp5
Fbln2
Smim38
Fgfrl1
Tcp10a
Mfsd13b
Cdr2
Ccdc33
Mtmr14
Srxn1
Ttll10
Rhobtb3
Sgsm3
Xirp1
Muc3
Zpbp
Spata48
Mgll
Adgrg1
Col13a1
Krtap6-1
Gm10228
Cic
Mall
Akirin1
Katnb1
Cwc22
Paf1
Med29
Zfp869
Oat
Ccdc106
Scamp5
Rnf43
Zfp580
Smchd1
Hcn1
Rab11b
Fxyd3
Smyd1
Krcc1
Uhrf1bp1
Wdr45
Fbxo33
Rusc2
Prkaca
Slc39a3
Srgap2
Fam72a
Ska2
Prr11
Atp6v0c
Amdhd2
Psmd5
Snx22
Ensa
Cutal
Sel1l
Rad21l
Ccdc85c
Duxbl3
Duxbl2
Duxbl1
Alox5ap
Sv2b
Sod2
Dmxl1
Arsi
Olfr47
Fbxl14
Calml3
Dbp
Car11
Sec1
Gm7361
Nudt2
Kif24
Tacc1
Phldb1
Dab2ip
Rps19
Gzmm
Bsg
Tns2
Frem3
Spdl1
Lpar3
Ccsap
Tmed1
H2-T9
H2-T22
Gm6034
Pdcd1
Dio2
Kiss1
Mvk
Mmab
Lsm6
Rassf5
Spi1
Cfap73
Olfr1419
Zfp219
Tmem253
Nlk
Nek6
Slc25a41
Khsrp
Rps7
Tmem94
Anp32e
Pramel51
Rnf26
C1qtnf5
Gpr162
Nkx2-5
Ces3b
Mtf2
Dot1l
Nfatc2ip
Zfp637
Timm17b
Pqbp1
Ugp2
Mup17
Atg16l2
Cspp1
Cops5
Smarcal1
Pcsk5
1110004F10Rik
Kctd9
Cdca2
Nfe2
Plekhf2
Actrt2
Usp1
Fam76a
Prickle1
Ccnj
Ss18
Per2
Rbm15
Glcci1
Gm11780
Ptch1
Il17rb
Chdh
Dgcr6
Dync1h1
Arih2
Ttc30b
Golph3l
Relch
Pign
Slc25a20
Tvp23a
Nuggc
Cyp26b1
Cul2
Rap2a
Tmem102
Fgf11
Chrnb1
Cxcl1
Rnpc3
Slit3
Frmd4a
Ppm1k
Pnpo
Ss18l2
Nktr
Sec22c
Abtb2
Fcgr3
Fbp2
Mogs
Nav3
Xylt1
Wdr62
Arpc1b
Plod2
Chrna2
Trappc9
Acvr1b
Fbxw11
Hhipl1
Ddx6
Trpm3
Akt2
Med23
Zfp608
Mtss2
Tom1
Hbp1
Myadm
Slc25a25
Naif1
Iqce
Brat1
Rnase13
Ndrg2
Tppp2
Cdhr4
Inka1
Uba7
Tmem218
Wasf2
Slc66a2
Hsbp1l1
Iffo1
Prox2
Sec14l1
Dlst
Tcf12
Dusp12
Mrps10
Krt15
Allc
Krt19
Tmprss3
Nudcd2
Hmmr
Wipf1
Prdx2
Ift140
Cramp1l
Tmem18
Rnaseh2a
Tctn2
Ppm1e
Dhrs3
Zfand3
Aox2
Maco1
Kcns1
Ccdc187
Meis1
Kdm4a
Ppfibp1
A930018P22Rik
Ubr3
Med25
Fuz
Hnrnpr
Calcoco1
Ccer1
Fzd2
Idh3b
Pip4k2b
Gpr84
Evi5l
Polg
Magel2
Gm6721
Lect2
Neo1
Sema3b
Ssrp1
P2rx3
Ezh2
Trim8
Pmpcb
Erbb3
3110082I17Rik
Tcf19
Pou5f1
Cchcr1
Homer2
Thoc1
Ivd
Arap1
Asb1
Siglec15
Spink12
Olfr812
Mag
Cct8l1
Dok3
Ddx41
Nacc2
Immp1l
Elp4
Grm1
Rpn2
Mroh8
Tle3
Copz1
Bsdc1
Cdc23
Fhad1
Crtap
Dus1l
Spag9
Ctps
Tmem106c
Ap2m1
Mycbpap
Stau2
Scnn1g
Zfp607b
Ireb2
Znhit3
Psma2
Mrpl32
Ifi211
Scyl3
Spaar
Hrct1
Rp1
Map3k3
Snrpd3
Gucd1
Rspry1
Psme3ip1
Kmt2a
Ubald2
Zfp52
Hspa4
Ddx1
Slc26a8
Mapk14
Sgms1
Dap3
Syt8
Tnni2
Speer4d
Zfp341
Pxmp4
Pdrg1
Zbtb3
Polr2g
Prr5l
Klhl26
Scamp2
Padi2
Tm4sf1
Usp10
Prkcb
Tbx21
Nckap5
Osbpl5
Bcat2
Maoa
Ankrd6
Ophn1
Zfp599
Tmem54
Hsd17b14
Xkr7
Piwil1
Fam24b
Fam24a
Cuzd1
Ier5
Supt5
Prickle2
Dcc
G3bp1
Atox1
Slc35e2
Srbd1
Hdac1
Tprn
Ssna1
Anapc2
Tmem203
Ndor1
Elmo2
Tmx2
Med19
Selenoh
Pdgfra
Igsf8
Atp1a2
Cep135
Tedc1
Tbc1d10a
Crip1
Lars
Angel1
Isoc2b
Olfr237
Ngdn
Spire1
Arl14epl
Anln
9530077C05Rik
Akap11
Tcim
Ror2
Zfp574
Grik5
Ankhd1
Zdhhc5
Spag8
Hint2
Ift88
Erg
Lum
Tmigd1
Hexim2
Ppp6r3
Chd6
Tnc
Wnt2b
Armc1
Gas7
Folr2
Wnt10b
Card19
Tox2
H2-DMb2
Gulo
H2-DMb1
Idh2
Lyzl1
Gm14139
Dhrs2
Adamts19
Srf
Cul9
Arf4
Asrgl1
Fnip2
Pianp
Rai1
Sptlc2
Eid3
Prmt1
Ncf2
Shisa5
Slc39a7
Rxrb
Lyrm7
Hint1
Col11a2
Ube2b
Cdkl3
Extl1
Ube2a
C330007P06Rik
Nvl
Cnih4
9430038I01Rik
Sarnp
Ormdl2
Gm3667
Rraga
Faap24
Lca5
Cemip
Kat6b
Tbcb
Polr2i
Ovol3
Ak1
Sorbs2
Nedd4
Ntng1
Vgll4
2900026A02Rik
Pan2
Il23a
Wdr27
1600012H06Rik
Poc5
Yipf2
Timm29
Mfap3l
Slc14a1
Siah1b
Ankfy1
Gm35586
Akap7
Nbdy
Diaph1
Arl2
Rnf181
Tmem150a
Osbp
Stat3
Ints4
Xab2
Stxbp2
Pet100
Pcp2
Ets1
Rps15
Apc2
Olfr1396
Lratd1
Zfp660
Rbm25
Cct8
Fdft1
Stt3a
Rcl1
Abr
Efhd2
Gpsm2
Cdc45
Heatr1
Ano8
Gtpbp3
Gm13212
Trim45
Grin2c
Fdxr
Mxd4
Rrm1
Abl1
Dcaf15
Gjc3
Speer4e
Rassf7
Lmntd2
Mterf2
Trappc11
Rwdd4a
Psat1
Rbbp6
Wdr81
Tlcd2
Atf7
Trhr2
Msantd4
Cemip2
Cd1d1
Fibin
Ctla4
Wwox
Eef2
Dapk3
Rpl27
Ifi35
Gtf2b
Got1
Tars
Ticrr
P4hb
Arhgdia
Syce1l
Mon1b
Hip1
Tomm40
Klf1
Gcdh
Timm10
Smtnl1
Veph1
Ghsr
Lrrc71
Pum3
Glrx5
Srp68
Galr2
Mrpl23
Ric8b
Piwil4
Sparcl1
Mfsd8
Cytl1
Rpp38
Acbd7
Stk32b
Traf7
Rab26