ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104231 | Limbs and tails
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◣ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

T2
Rab11fip4
Cldn34d
Hexb
Kpna1
Greb1
Nfe2
Myh14
Vmn2r102
Txndc11
Fgd4
Fbp2
Frmd4a
Apobec2
Clasp2
Foxp2
Il31ra
Ier2
Cdc42ep4
Sec23b
Rbbp9
Wwox
Bhlhe40
Kctd14
Padi2
Bmp5
Olfr806
Limch1
E030030I06Rik
Sema4d
Mindy4
Col16a1
Rarg
Fbxw4
Arhgef3
Oat
Lrrc75b
Ggt1
Otogl
Aadacl2fm1
Abhd6
Fgfrl1
Slc14a2
Slc44a3
Gstm5
Abtb2
Calr4
Smg9
Rai1
Psma8
Tmem211
Zfp637
Gm17660
Ccser2
Vgll4
Nol11
Extl1
Gpsm2
Smim38
Rnf38
Med4
Nkx2-6
Bsdc1
Nt5c2
Mtf2
Inpp4a
Atp5g1
2900026A02Rik
Rlbp1
Fanci
Prrg4
Ccdc69
Cap1
Sympk
Ncaph
Itpripl1
Foxa3
Lep
Rfk
Ap2m1
Sspn
Mbnl2
Sema3b
Kcnj16
Pramel32
Ifna13
Col9a3
Cpa5
Cyth1
Dchs2
Gm10710
Kras
H2-DMa
Brd2
Ttc30a1
Olfm1
Amotl2
Cd209a
Rab4b
Mia
Plod2
Tecpr1
Ap3m2
Setd4
Cbr1
Cnot2
Efhd2
Marcksl1
Oasl1
Rgs8
Rusc2
Irf2bp2
Cttnbp2nl
4930564D02Rik
Cer1
Csf2ra
9430038I01Rik
Acvr1b
Aldh9a1
Mfsd8
Rgs3
Sox8
Lmf1
Arhgef17
Papss2
Sec14l1
Ptpn14
Eipr1
Mycbpap
Gfpt1
Pgpep1
Arhgef1
Rsph3b
Col6a6
Sphk1
Unc13c
Dab2ip
Phc2
Rbfox2
Nhsl1
Bcl9l
Zbtb18
Tle3
St3gal4
Mical1
Etv5
Duxbl3
Duxbl2
Duxbl1
Ror2
Cdh12
Tmem125
Mtss2
Stap2
Mpnd
Slc26a1
Sorbs2
Dstyk
Cnn3
Arhgef19
Tox2
Ptk7
Prickle1
Fli1
Angel1
Ak1
Sv2b
Sox5
Gzmm
Bsg
Nuggc
Kcnn4
Acsbg1
Plekhf2
Rara
Fmnl2
Tmem18
Pygo2
Pbxip1
Abr
Pp2d1
Arsi
Actg1
Fscn2
Zfp469
Nfatc1
Lrrc8a
Ksr1
Col9a1
Ttll10
Fzd2
Chadl
Slc35a3
Myadm
Ccdc90b
Srxn1
Stat5b
Me1
Calcoco1
Ddx1
Zfp143
Dnah7b
Ppdpf
Ogfr
H2-T24
Cops9
Olfr1274
Colgalt2
Mbnl1
Cemip2
Calml3
Zfp24
Shc4
Mrc2
AI429214
Cerk
Nedd4
1700034J05Rik
Defb45
Defb19
Txnip
Ankfn1
Osbpl1a
Mtss1
Cxxc5
Spire1
Rcn1
Zfp791
Magi1
Rtkn
Ptpre
Wdr62
Zfp598
Npw
Clip3
Nynrin
F830045P16Rik
Pacs2
Uchl4
Col6a1
Cobll1
Rsph3a
Fscn1
Pabpc1l
Acsm3
Ss18l2
Nktr
Sec22c
Cbx5
Tns2
Crybg1
Slc35e3
Scx
Scamp2
Cntn1
Hoxa4
Nxnl1
Slc27a1
Pnmal2
Tnrc6b
Tedc1
Ankar
Ntng1
Cdhr4
Inka1
Uba7
Vangl2
Phldb1
Bambi
Cabcoco1
Plekhb1
Snx22
Tbc1d10a
Adcy5
Efnb3
Polr2e
Gpx4
Lama4
Rpl23a
Rab34
Proca1
Igsf8
Atp1a2
Matn3
Cracd
Veph1
Ninj1
Pcdh20
Tmem63a
Clec2g
Lekr1
Nrip1
Cep97
Gm525
Tspan8
Col8a2
Rpl27
Ifi35
Fxyd3
Tfg
Rab8a
Srpk2
Rrm1
Il25
Efs
Cmtm5
Cdkal1
Dusp11
Pbx2
Gpsm3
Ppp2r1a
Vwa3b
Nckap5
A930018P22Rik
Ncor2
Ets1
Pgp
Mlst8
Bricd5
Cxcl11
Comp
Slc2a1
Syt8
Prelp
Capn9
Agt
Tnrc18
Mcam
Cdk2ap1
Phox2b
Cd96
Mrpl36
Arhgef10l
Trnp1
Tent5b
Tgm2
Abca3
Abca17
Rnf44
Cdhr2
Tjp3
Pip5k1c
Kmt2a
Iqch
Aagab
Cmc2
Cenpn
Fam53c
Cdc25c
Lrpprc
Phrf1
Calm3
Flcn
Prkdc
Mcm4
Cnot6
Gipc1
Ptcd2
Mrps27
Mia2
Cdiptos
Cdipt
Tardbp
Pknox1
Denr
Rita1
Por
Ddx54
Ppm1l
Rpl22
Rnf207
Tmem129
Tacc3
Slbp
Ccdc85c
Gm7244
Git2
Ankrd13a
Jag2
Taf15
Mmp28
Tigd5
Eef1d
Arrdc4
Septin11
Kctd2
Atp5h
Gnai2
Atg12
Ap3s1
Akirin1
Wdr45
Rmnd5a
Dut
Prdm10
Asah1
Was
Cenpu
Smim41
Atg101
Sash1
Hyal2
Hyal1
Fus
Ndufb1
Cpsf2
Aldh4a1
Prox2
Cln8
Dnmt1
Ptov1
Ift27
Tmem260
Hdac2
Arntl
Fzr1
Dohh
Caskin1
Arid4a
Ndst2
Uchl3
Tusc2
Uqcrh
Lrrc41
Psip1
Ptcd3
Polr1a
Tada3
Arpc4
Smim24
Gm48552
Prkci
Eapp
Shc1
Rpn2
Mroh8
Galnt10
Ptdss1
Mterf3
Noct
Madd
Tex14
Eif3b
Cenpe
Cenpp
Ss18
Eed
Wasl
Zbtb4
Slc35g3
Polr2a
Bcl6
BC005537
Junb
Trir
Lsg1
Wdr77
Atp5pb
Sp2
Atrnl1
Sod2
Polg
Gnb2
Ube2b
Cdkl3
Itgb4
Cbr3
Paxip1
Rtn3
Myl12a
Pik3r3
Raly
Flad1
Dlst
Cks1b
G3bp1
Atox1
Lenep
Mat2a
Get3
Sharpin
Maf1
Cyc1
Fbxo33
Tst
Mpst
Uros
Bccip
Mtmr14
Cwc27
Taf6
Mblac1
Cnpy4
Diaph1
Cul2
Rps29
Lrr1
Qrich1
Qars
Cltc
Baz2a
Trappc3
Map7d1
Smc3
Bzw1
Tspan4
Polr2l
Fam20b
Cd151
Gm35339
Robo1
Ajuba
Cd164
Rps27l
Zfp949
Olfr855
Olfr854
Oxr1
Dot1l
Ankrd54
Ppp1r13l
Cd3eap
Xpc
Lsm3
Ly6g6f
Abhd16a
Rhbdd3
Phlda3
Dgat2
Mylip
Pa2g4
Zfp219
Tmem253
Nol6
Ska2
Prr11
Rfx1
Dpp9
Trappc9
Pkia
Abhd2
Hexim2
Top2a
Med1
Cdk12
Ewsr1
Dhrs3
Ttc39d
Rpl19
Cacnb1
Dync1h1
Lrrc56
Hras
Slc35e2
Rbm25
Paip2b
Hjurp
A730008H23Rik
Proser1
Nhlrc3
Fbxl14
Stat1
Nphp4
Kcnab2
Tmem41b
Rpgrip1
Hnrnpc
Znhit1
Plod3
Eef2
Cdca7l
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Ubald1
Mgrn1
Rab5b
Pmel
Cdk2
Ubr4
Akt2
Hmox2
Selenow
Eif2ak3
Traf2
Zfp869
Rnasek
Pfdn4
0610010K14Rik
Taf12
Gmeb1
Tcp11l2
Tepsin
Ndufaf8
H3c15
H3c14
H2ac19
H2ac18
Osbp
Nemf
Kremen1
Mmp15
Atp6v0c
Amdhd2
Cox8c
Bzw2
Ankmy2
Tmem250-ps
Gm5165
Tnnc2
Stat3
Cnot1
Atp5b
Per2
Fam227a
Cby1
Cdt1
Aprt
Rab33b
Idh3b
Sp1
Slc1a1
Tjp2
Tom1
Unk
H3f3b
Abhd18
1700034I23Rik
Gtf2a1
Snap47
Jmjd4
Wasf1
Fam227b
Dtwd1
Cdc40
Frat2
Dnajc16
Casp9
Ahnak
Tbck
Aimp1
Mvk
Mmab
Gm3448
Gm3417
Susd6
Pole3
Alad
4933430I17Rik
Slc39a3
Yif1b
Kcnk6
Trpm4
Rab11b
Hrc
Id1
Cic
Htra2
Aup1
Nmral1
Ctnnb1
Reep4
Hr
Dst
Nme1
Niban2
Stip1
Get4
Arid3c
Camta1
Hook2
Sigmar1
Slc35b1
Rnf5
Agpat1
Ager
Ier5l
Cct8
Zfp821
Lmnb2
Uvssa
Utp3
Wdr92
Pno1
Actr3
Tarbp1
Arl2
Pum3
Atg16l2
Nfib
1700029I15Rik
Fstl3
Ephb2
Ilf2
Chmp7
Dapk3
Zxdc
Nudt2
Kif24
Get1
Acacb
Tbc1d17
Pnkp
Oacyl
Akt1s1
Ints10
Cfap20
Slc30a5
Mrpl21
Ighmbp2
Dqx1
Poldip3
Ankhd1
Ube2c
Dgat1
Dnm2
Rbbp6
Arl4d
Frmd6
Nt5c3
Rbm39
Them6
Slurp1
Psca
9030025P20Rik
Ubd
Rbbp8
Tgfbi
Col6a3
Tbc1d31
Bbs2
1700016H13Rik
Fbxo24
Ints4
Tmem145
Prr19
Pafah1b3
Fkbp3
Fancm
Tcte3
Ermard
Styxl1
Srbd1
Mdh2
Sfi1
Frat1
Mapkapk5
Gatad2a
Utp14b
Acsl3
Taf9
Rad17
Ak6
Nuf2
Isy1
Fdft1
Angptl4
Tmem218
Myo10
Erp27
Sorbs1
Smim17
Mtch2
Gramd1b
Tob1
Spty2d1
Lfng
Birc2
Dok3
Ddx41
Chordc1
Arhgap19
Slc25a41
Khsrp
Scrt1
Plekha1
Tpt1
Lrch4
Wdfy2
Nfe2l1
Tmem167b
Eif4enif1
Mrpl30
Mitd1
Mapk8ip1
Prkaca
Trip10
Gpr108
Limk2
Fchsd2
Cd79a
Serpina3n
Slc34a3
Mis12
Derl2
Gfra4
Fnbp1
Tcerg1
Oprd1
Zscan25
Rassf7
Lmntd2
Gm3435
Wnt10a
Sncg
Mmrn2
Tmem107
Mrps11
Mrpl46
Fam166a
Sirt4
Hexim1
Cspp1
Cops5
Clic4
Nfatc2ip
Tubb4b
Pip4k2b
Fam149b
Ecd
Ttc14
Kmt5c
Glrx5
Tcf3
Hes6
Rps28
Gpr84
Prdx2
Pop7
Frmd4b
Cnot3
Cct5
Atpsckmt
Cdkn2c
Klhl21
Samd4b
Gmfg
Faf1
Tomm40
Esyt2
Med6
Zswim4
Smim4
Nt5dc2
Armc1
Marchf3
Snrpc
Trib1
Zfp687
Psmd3
Nabp1
Ccdc124
Palb2
Dctn5
Fau
Phlda1
H4c3
H1f6
Opa1
Trim7
Slc18b1
Rps12
Tsga10
Lipt1
Msmo1
Kpnb1
Sema3f
Vasp
Ppm1n
Usp20
Kifap3
BC005624
Nepn
Gopc
Fem1b
Dffb
Cep104
Prxl2b
Syngr1
Rpl3
Zfp607b
Calm1
Trim41
Slc26a8
Mapk14
Utp18
Mbtd1
Ier5
Zfpl1
Vps51
Tmem262
Cdca5
Gtf2f1
Fbxw7
Pan2
Il23a
Stk32c
Zfand3
Rnf125
Pias4
Ttll7
Aard
Hipk2
Mideas
Nup107
Arhgap11a
Ttll5
Erg28
Emsy
Slc39a4
Ttc41
Tbxa2r
Hsp90b1
Cipc
Cactin
Nectin3
Prpf40a
Arl6ip6
Mark3
Ccnt2
Egr2
Il34
Rps3a1
Plekha7
Actn4
Rer1
Morn1
Crtc1
Srm
Npr1
Gm51425
Jund
Iqcn
AW549877
Zcchc14
Fam174c
Eps15
Fitm2
Ulk1
Psmd5
Lamp1
Aig1
Xrcc1
Pinlyp
Grin2c
Fdxr
Ngdn
Mdfi
Zfp654
Cggbp1
Espn
Nup133
Hspa4
Aacs
Zfp526
Dedd2
Cirbp
Spdye4b
Rbak
Inip
Gpn3
Fam216a
Kif2c
Fosb
Tm7sf2
Pde3a
Map2k7
Slc25a25
Grb2
Spink5
Bmf
Vta1
Rhbdl3
Tfap2a
Evpl
Cebpa
Tsc22d1
Ist1
Lig4
Abhd13
Eif4a3
Card14
Zc3h18
Sgms1
Ubl5
Pip4p1
Pin1
Osgep
Fbxl12
Apex1
Smoc2
Kpna3
Prss57
Sde2
Kcnn1
Tmco3
Dcun1d2