ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15441805 | Unclassified
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◣ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Txndc11
Cerk
Zbtb4
Slc35g3
Polr2a
Eapp
Ttc39d
Cenpu
E030030I06Rik
Tmem125
Stat1
Rbbp8
Tex14
Irf2bp2
Cdiptos
Cdipt
Gtf2a1
Utp14b
Acsl3
Cd209a
Lrpprc
Snap47
Jmjd4
Rnf44
Cdhr2
Pole3
Alad
4933430I17Rik
Sectm1a
Gtf2f1
Slc35b1
Dnajc16
Casp9
Ccdc124
Kcnn1
Taf12
Gmeb1
Ppm1l
Unk
H3f3b
Ctnnb1
Pum3
Tob1
Kmt2a
Fus
Eif1
Fam124b
Arl15
Nme1
Zc3h12d
Hexim2
Trappc9
Gm3448
Gm3417
Gm3435
Farsb
Vapa
Tram1
Tcte3
Ermard
Tbck
Aimp1
Sh2d4b
Birc5
Rpl22
Rnf207
Ubr4
Htra2
Aup1
Dqx1
H4c3
H1f6
Tbxa2r
Cactin
Papss1
Cdkn2c
Faf1
Spink5
Nrbf2
9030025P20Rik
Klf7
Hjurp
A730008H23Rik
Chmp7
Mapkapk5
Dgat1
Scrt1
Lsm14b
Rad51ap1
D6Wsu163e
Jund
Iqcn
Parp6
Hsp90aa1
Sde2
Nudt9
Get4
Mknk2
Magi1
Proser1
Nhlrc3
Cdk11b
Popdc2
Smoc2
Gpn3
Fam216a
Syngr1
Rpl3
Ubb
Taf4b
Spa17
Siae
Cfap20
Tsga10
Lipt1
Serpina3n
Cldn34d
Ccnt2
Baalc
Fam174c
Cirbp
Hs6st1
Smc6
Gen1
Hadhb
Hadha
P4ha1
Nabp1
Taf9
Rad17
Ak6
Cltc
Gzmm
Cdc34
Arl4d
Dok3
Ddx41
Tmem167b
Dnaja1
Uvssa
Pdcd4
Tubg1
Retreg3
Irf8
Tbc1d31
Errfi1
Emsy
Dnajb9
Cct8
Eif4e
Nup133
Hint3
Mtmr14
Clptm1
Apoc2
Ier5
Klf4
Wdr77
Atp5pb
Lypla2
Gale
Usp12
Znfx1
Ptcd1
Cpsf4
Surf6
Rpl7a
Med22
Nfat5
Pop7
Ebpl
Tardbp
Crp
Steap4
Xpnpep3
St13
Dnajb7
Lmnb2
Timm13
Runx1
Slc18b1
Rps12
Fam187a
Eftud2
Ccdc103
Prdm15
Mtf2
Mat2a
Bmf
Hes6
Carmil3
Tcf3
2410002F23Rik
Ptpn2
Birc2
Ndufaf5
Esf1
Get1
Med6
Vps26c
Hspa9
Abhd10
Robo1
Stk32c
Lrrc27
Isg20
Mmaa
Fam169b
N4bp2l2
Pds5b
Mpp7
Tigd5
Eef1d
Fosb
Slc3a2
Irf7
Tspan4
Polr2l
Cd151
Trir
Calm1
Tnpo2
H2aj
H4f16
Rer1
Morn1
Gtf3c2
Hnrnph1
Gapdhs
Spen
Tmem147
Ints4
Psmd3
Ier3
Flot1
Tmtc3
Cep290
Map3k7
Esyt2
Rhob
Gfra4
Gmfb
Cgrrf1
Nomo1
Abcc6
Spg11
Bzw1
H3c15
H3c14
H2ac19
H2ac18
Anapc10
Abce1
Tnfaip3
Haus6
Picalm
Ifnar1
Agrp
Atp6v0d1
Nol6
Usp53
Rab33b
Kpna3
Pxk
Ahcyl1
H2-L
H2-D1
LOC547349
Ppp1cb
Ifrd1
Zfp868
Paxip1
Clptm1l
Ctnna1
Dnaja4
Man1b1
Polr3f
Dzank1
Hnrnpab
Borcs7
Tmem129
Tacc3
Slbp
Bbs2
Spdye4b
Rbak
Otud6b
Sgpl1
Pstpip2
Nfe2l1
Rapgef6
Serf1
Bdp1
Zc3h15
Trappc8
Casc3
Fbxw7
Poc5
Megf8
Mob4
Nav3
Zbtb37
Ythdc1
Taf6
Mblac1
Cnpy4
Tmem41b
Osbpl7
Mrpl10
Lrrc46
Ppp1r12a
Ssbp2
Setx
Srsf9
Oaz1
Tmbim1
Amd2
Amd1
H2ax
Dpagt1
Hmbs
Rnf125
Med17
Peli1
Eef2
Dapk3
Tmem107
Pias4
Fabp12
Angptl4
Tut7
Ftl1
Bax
Ywhag
Faf2
Dnajb12
Plpp3
Rhbdl3
Srsf1
Gtf2h3
Eif2b1
Emc7
Ppp1r8
Txnl1
Ahnak
Chordc1
Exosc5
Bckdha
Rab15
Phlda3
Myo10
Prdx1
1810037I17Rik
Cox7a2l
Alpk1
Tifa
Gbp10
Wdfy2
Saysd1
Rnf216
Itga6
Birc3
Cyrib
Pabpc4
Taf4
Sec61b
Alg2
Tbata
Chrac1
Serpina3i
Snrpc
Atg5
Zfp143
Actr3
Ufl1
Septin7
Olfr1416
Ndufa10
Lig4
Abhd13
Tpt1
Ccni
2010109A12Rik
Virma
Eef1g
Wfikkn2
Akap10
Fam241a
Rgs3
Mis18bp1
Sf3b1
Grb2
Arf6
Btg1
Tmpo
Polg2
Ddx5
Cep95
Colgalt1
Tcp1
Pnldc1
Mrpl18
Rps2
Rpl3l
Rnf151
Ndufb10
Klhl18
Kif9
Riok1
Cage1
B2m
Bclaf1
Nuf2
Thap12
Ric8b
Tnfrsf8
H2-K1
Elf3
Med18
Slc35f6
Clec2g
Gfpt1
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Wdr43
Trmt2a
Ranbp1
Stam
Matr3
Fstl3
Cebpa
Kansl3
Fer1l5
Cdkn2aip
Ext1
Vta1
Rnf7
Ccser2
Ttll5
Erg28
Hspa4
Wipi2
Slc46a2
Tfg
Naa40
Sbno2
Smg9
Gm1113
Mafb
Pdap1
Bud31
Cops8
Rhbdf2
Slc38a2
Pus1
Ep400
Tead3
Gadd45b
Agfg1
Ppp2r5b
Atg2a
Cherp
Atad3a
Lax1
Tuba1c
Yif1b
Kcnk6
Actn4
Ccna2
2200002D01Rik
Ppp6r1
Tmem88b
Ankrd65
Ankrd22
Gm7244
Uchl3
Map2k7
Tgfbr3l
Rbm47
Kbtbd3
Ikzf5
Acadsb
Fasn
Txnip
H3c8
Naa80
Hyal3
H4c6
H3c7
H2bc9
Lsmem2
Ifrd2
Ilkap
Zfp213
Nup107
Wdr95
Rab6a
Arl8b
Nsun6
Arl5b
Usp21
Ppox
Tmem50a
Syf2
Rsrp1
Arih1
Fzr1
Dohh
Smim24
Gm48552
Brpf1
Gtf2b
Rbpj
Sbk1
Rexo1
Tomt
Lamtor1
Anapc15
Mageb3
Ctdspl2
Slc26a8
Mapk14
Fitm2
Cfap298
Pa2g4
Zxdc
Zfpl1
Vps51
Tmem262
Cdca5
Gm550
Phb2
Emg1
Nupl1
Atp1a1
Rhbdd3
Ewsr1
Dync1h1
Gpatch8
Jmjd1c
Cabyr
Utp15
Ankra2
Tmem176b
Tmem176a
Rab27a
Frmd4a
Slc34a3
Fam166a
Tubb4b
Eps15
Stpg3
Tnp2
Socs1
Prm3
Prm2
Cluh
Dcxr
Tmx3
Cbr2
Thsd4
Sncg
Mmrn2
Eif2s1
Atp6v1d
Csnk1a1
Slc2a9
Prkn
Pacrg
Slc35e2
Prr14l
Depdc5
Kif2c
Polr2e
Prcc
Sugp2
Armc6
Washc1
Ndufv2
Wdr41
Tnc
Srd5a1
Nsun2
Uqcc3
Ubxn1
Pex11b
Rbm8a
Eif4b
Mphosph9
2810006K23Rik
Atg14
Trip11
Ube2n
Serinc3
Ctsl
Sema3f
Arl6ip1
Dmrt2
Rhebl1
Kmt2d
Zfp12
Spdye4a
Atxn2l
Eif4a2
Rps19bp1
Atf4
Pitpnb
Harbi1
Atg13
Upf2
Dhtkd1
Ranbp6
9930021J03Rik
Gnb2
Tspan9
Usp16
Vdac2
Rb1cc1
Rps27l
Arhgap11a
Unkl
Percc1
BC003965
Cdc42se2
Ptp4a1
Zfyve16
Kifap3
Hnrnpa2b1
Cbx3
Pura
Mknk1
Nepro
Xpo5
Polh
Usp32
Igdcc4
Bcl3
Zfp148
Phf14
Ndufa4
Mtrex
Dhx29
Clpx
Tmem39a
Rnf19b
Tmf1
Txnl4a
Rbfa
Gm16286
Sptan1
Slc12a4
Id4
Hyal2
Hyal1
Tusc2
Arid3b
Itgb1bp1
Cpsf3
Fntb
Zfand5
Rps3
Fbxl14
Nectin3
Uspl1
Nde1
Marf1
Sqstm1
Rgl2
Tapbp
Ccdc126
Atp5l
2300009A05Rik
Smap1
Trrap
Tmem130
Rps24
Polr3a
Angpt1
Rab35
Poldip3
Mrpl30
Mitd1
Psmb2
Notch2
U2surp
Gtf2e2
Pcmtd1
Cep120
Rfesd
Tmigd3
Herpud2
Ccl20
Mideas
Dnajb1
Zmiz1
Gatb
Osbpl9
Sap18b
Sap18
Yeats4
Calm3
Zfp628
Nat14
Gm36210
Calm5
Parp8
Col14a1
Ints10
Aebp2
Epg5
Kntc1
Stat3
Rwdd1
Tmem104
Nat9
Dbi
3110009E18Rik
Btbd7
Tjap1
Hhip
Tomm40
Smg1
Galk2
Cops2
Thumpd3
Tsc22d1
Rad23b
Npm1
Fdxacb1
1110032A03Rik
Rps28
Phlda1
Cyb561d1
Atxn7l2
Arf4
Ercc6l2
Tmem217
Tbc1d22b
Sik2
Serpinb1a
Xpc
Lsm3
Hspa5
Diras2
Ttc32
Setd3
Ccnk
Prepl
Camkmt
Sel1l2
Macrod2
Hif1a
Srsf2
Mettl23
Jmjd6
Mfsd11
Scrn3
Cir1
Srr
Smg6
Mbd5
Gmcl1
Orc4
Atr
1700065D16Rik
Dsc2
H2bc21
H2ac21
H2ac20
Slc18a1
Atp6v1b2
Mylip
Ubd
Yars
S100pbp
Ulk2
Slc9a1
Nans
Gm40193
Psmb6
Gltpd2
Kmt2e
Zc3h18
Golga7
Nbeal1
Eif2b2
Tcf4
Sipa1l3
Zfp963
Blnk
Fam53c
Cdc25c
Ccdc85c
Bod1l
Tmem19
Ift22
Eefsec
Pstk
Sox9
Napg
Wdtc1
Ufm1
Sub1
Olfr536
Rps17
Tnrc18
Naa35
Tex2
Tspan14
Igsf3
Otud1
Tdp2
Acot13
Tank
Cop1
Sspn
Slc20a1
Synj2
Nup50
Bcar1
Adam17
Gls
Atg10
Ubald1
Mgrn1
Utp3
Mycbp
Psmd1
Herc4
Cdk20
Krt18
Uchl5
Ro60
Ranbp2
Odc1
Nop58
Kdelr2
Tmem53
Armh1
Ss18
Tmem250-ps
Me2
Klf6
Coa8
Bag5
Boc
Ythdf2
Rhot1
Cmc2
Cenpn
Mtmr6
Nfkbiz
Rps20
Ptcd3
Polr1a
Junb
Prdx2
Tmed2
Rilpl1
Hdlbp
Rnaseh2a
Sgo1
Psma2
Mrpl32
Rps15a
Pdk4
Atp6v1g1
Rps23
Mfsd8
Cradd
Myl6b
Myl6
Srsf5
Palld
Ppil4
Rita1
Ddx54
Opa1
H4c14
H3c13
H2bc18
C87436
Unc13a
Jak3
Chpf2
Abcf2
Rbx1
Ccnt1
4930415O20Rik
Hspa1l
Hspa1a
Hspa1b
Ascc3
Slc25a10
Mrpl12
Eif2s3x
Ppp4r3a
Mical3
Oxnad1
Dph3
Trpv1
Adtrp
Naca
BC005537
Glt28d2
Cfap97
Suclg1
Sh3gl1
Chaf1a
Ppp1ccb
Ppp1cc
Ccnl1
Gbe1
Mccc1
Vps8
Rmnd5a
Btg2
Srsf6
Atp13a2
Icam1
Ccl5
Pomt1
Rpl24
Zbtb11
Tmub1
Fastk
Agap3
Raly
Wdr92
Pno1
Senp8
Myo9a
Hspa8
Gps2
Eif5a
Gorab
Cited2
Snn
Nfkbia
Gtf2f2
Tor1aip2
Tor1aip1
Cd74
Wwox
Tada3
Arpc4
Tmem123
Ice1
Erc1
Rmnd1
Armt1
Tnrc6c
Tomm20
Ehmt1
Cbwd1
Rpl21
Nup153
Azin1
Dgki
Casp4
Cog6
Zfp358
Mcoln1
H2bc8
H4c4
H3c4
H2bc7
H2ac7
H2bc6
Mycbp2
Pnrc1
Gpr19
Dclre1b
Ap4b1
Spg7
Siah3
H2bc12
H2ac12
H4c9
H2bc11
H2ac11
Taf15
Mmp28
2900026A02Rik
Atg16l1
Mrpl45
Rpl22l1
Ctbp1
Cpeb2
Ddx20
Tars
Tmsb10
Tmem186
Pmm2
Por
Slc25a32
Dcaf13