ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130589 | Neural tube
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◣ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

T2
Rab11fip4
Greb1
Hexb
Cldn34d
Kpna1
Nfe2
Col16a1
Wwox
Olfr806
Rarg
Slc44a3
Cdc42ep4
Myh14
Dab2ip
E030030I06Rik
Abhd6
Fgd4
Vangl2
Rlbp1
Fanci
Fbp2
Txndc11
Otogl
Smg9
Apobec2
Ier2
Setd4
Cbr1
Smim38
Inpp4a
Il31ra
Aadacl2fm1
Olfr1274
Nkx2-6
Vgll4
Bhlhe40
Aldh9a1
Foxp2
Sec23b
Rbbp9
Frmd4a
Sema3b
Ccdc69
Cemip2
Mtf2
Kctd14
Psma8
Unc13c
Tent5c
Rara
Sema4d
Dchs2
Gm10710
Srxn1
Lrrc75b
Ggt1
Col6a6
Rgs8
Sympk
Foxa3
Etv5
Slc35a3
Tmem267
Bsdc1
Bmp5
Bcl9l
Tecpr1
Tmem18
Gm525
Adcy5
Tmem125
Shc4
Slc14a2
Mfsd8
Mbnl1
Cobll1
Cd209a
Extl1
Arhgef1
Amotl2
Rbfox2
Fbxw4
Prrg4
Rai1
St3gal4
Cdhr4
Inka1
Uba7
Gm17660
Arhgef3
Ap3m2
Dnah7b
Oat
Clasp2
Zfp469
Abtb2
Fgfrl1
Tmem115
Sox5
Tox2
Tle3
Cerk
Sox8
Chadl
Lmf1
Pramel32
Ifna13
Sspn
Mapk6
Abhd18
1700034I23Rik
H2-DMa
Brd2
Mycbpap
Rgs3
Rab4b
Mia
Padi2
Cyth1
Rnf38
Ccser2
Pp2d1
Pgpep1
Pbx2
Gpsm3
Irf2bp2
Papss2
Osbpl1a
Ccdc90b
Arhgef17
Tsc22d1
Aaas
Ss18l2
Nktr
Sec22c
Zfp637
Vmn2r102
Med4
Duxbl3
Duxbl2
Duxbl1
Mbnl2
Spire1
Ak1
Myadm
Fzd2
Ddx1
Atp5g1
Plekhf2
Zbtb18
Cap1
Kcnj16
Gstm5
Lekr1
Ankfn1
Dcaf5
Lamp1
Cxcl11
Sphk1
Cnn3
9430038I01Rik
Gfpt1
Cttnbp2nl
4930564D02Rik
1700034J05Rik
Lrrc8a
Rusc2
Colgalt2
Ppdpf
Pld1
Ptk7
Phldb1
2900026A02Rik
Hgsnat
Cxxc5
Magi1
S1pr2
Calr4
Cpa5
Phc2
Ptpre
Cltc
Rsph3b
Ppp1r1b
Stard3
Pygo2
Pbxip1
Me1
Rhoj
Limch1
Abca3
Abca17
Marcksl1
Kras
F830045P16Rik
Stat5b
Abr
Notch1
Mrc2
Prdm2
Prickle1
Plod2
Calcoco1
Ttll10
Rfk
Rrm1
Ncaph
Itpripl1
Csrnp3
Tgm2
Gm3776
Pde6a
Sec14l1
Igsf8
Fxyd3
Arhgef10l
Nuggc
Col9a3
Ogfr
Arhgef19
Sfi1
Nt5c2
Mtss1
Grin2b
1700029P11Rik
Dcdc2a
Pcdh1
Ncf2
Veph1
Plod1
2510039O18Rik
Sorbs2
Lep
Lcat
Psmb10
Ctrl
Gm51573
Tbc1d10a
Arsi
Crybg1
Sort1
Cntn1
Grk5
Comp
Wdr62
Clip3
Fmnl2
Rnf44
Cdhr2
Tjp3
Pip5k1c
Kmt2a
Iqch
Aagab
Cmc2
Cenpn
Fam53c
Cdc25c
Lrpprc
Phrf1
Calm3
Flcn
Prkdc
Mcm4
Cnot6
Gipc1
Ptcd2
Mrps27
Mia2
Cdiptos
Cdipt
Tardbp
Pknox1
Denr
Rita1
Por
Ddx54
Ppm1l
Rpl22
Rnf207
Tmem129
Tacc3
Slbp
Ccdc85c
Gm7244
Git2
Ankrd13a
Jag2
Taf15
Mmp28
Tigd5
Eef1d
Arrdc4
Septin11
Kctd2
Atp5h
Gnai2
Atg12
Ap3s1
Akirin1
Wdr45
Rmnd5a
Dut
Prdm10
Asah1
Was
Cenpu
Smim41
Atg101
Sash1
Hyal2
Hyal1
Fus
Ndufb1
Cpsf2
Aldh4a1
Prox2
Cln8
Dnmt1
Ptov1
Ift27
Tmem260
Hdac2
Arntl
Fzr1
Dohh
Caskin1
Arid4a
Ndst2
Uchl3
Tusc2
Uqcrh
Lrrc41
Psip1
Ptcd3
Polr1a
Tada3
Arpc4
Smim24
Gm48552
Prkci
Eapp
Shc1
Rpn2
Mroh8
Galnt10
Ptdss1
Mterf3
Noct
Madd
Pgp
Mlst8
Bricd5
Tex14
Eif3b
Cenpe
Cenpp
Ss18
Eed
Wasl
Zbtb4
Slc35g3
Polr2a
Bcl6
BC005537
Junb
Trir
Lsg1
Wdr77
Atp5pb
Sp2
Atrnl1
Sod2
Polg
Gnb2
Ube2b
Cdkl3
Itgb4
Cbr3
Paxip1
Rtn3
Myl12a
Pik3r3
Raly
Flad1
Dlst
Cks1b
Zfp143
G3bp1
Atox1
Lenep
Mat2a
Get3
Sharpin
Maf1
Cyc1
Fbxo33
Tst
Mpst
Uros
Bccip
Mtmr14
Cwc27
Taf6
Mblac1
Cnpy4
Diaph1
Cul2
Rps29
Lrr1
Qrich1
Qars
Baz2a
Trappc3
Map7d1
Smc3
Bzw1
Tspan4
Polr2l
Fam20b
Cd151
Gm35339
Robo1
Ajuba
Cd164
Rps27l
Zfp949
Olfr855
Olfr854
Oxr1
Dot1l
Ankrd54
Ppp1r13l
Cd3eap
Xpc
Lsm3
Ly6g6f
Abhd16a
Rhbdd3
Phlda3
Dgat2
Mylip
Pa2g4
Zfp219
Tmem253
Nol6
Ska2
Prr11
Rfx1
Dpp9
Trappc9
Pkia
Abhd2
Hexim2
Top2a
Med1
Cdk12
Ewsr1
Dhrs3
Ttc39d
Rpl19
Cacnb1
Dync1h1
Lrrc56
Hras
Slc35e2
Rbm25
Paip2b
Hjurp
A730008H23Rik
Proser1
Nhlrc3
Fbxl14
Stat1
Nphp4
Kcnab2
Tmem41b
Rpgrip1
Hnrnpc
Znhit1
Plod3
Eef2
Cdca7l
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Ubald1
Mgrn1
Rab5b
Pmel
Cdk2
Ubr4
Akt2
Mtss2
Hmox2
Selenow
Ap2m1
Eif2ak3
Traf2
Zfp869
Calml3
Rnasek
Pfdn4
0610010K14Rik
Taf12
Gmeb1
Tcp11l2
Tepsin
Ndufaf8
H3c15
H3c14
H2ac19
H2ac18
Osbp
Nemf
Kremen1
Mmp15
Atp6v0c
Amdhd2
Cox8c
Bzw2
Ankmy2
Tmem250-ps
Gm5165
Tnnc2
Stat3
Cnot1
Atp5b
Per2
Fam227a
Cby1
Cdt1
Aprt
Rab33b
Idh3b
Sp1
Slc1a1
Tjp2
Tom1
Tnrc6b
Unk
H3f3b
Gtf2a1
Snap47
Jmjd4
Wasf1
Fam227b
Dtwd1
Cdc40
Frat2
Dnajc16
Casp9
Ahnak
Tbck
Aimp1
Mvk
Mmab
Gm3448
Gm3417
Susd6
Pole3
Alad
4933430I17Rik
Slc39a3
Yif1b
Kcnk6
Trpm4
Rab11b
Hrc
Id1
Cic
Htra2
Aup1
Nmral1
Ctnnb1
Reep4
Hr
Dst
Nme1
Niban2
Stip1
Get4
Arid3c
Camta1
Hook2
Sigmar1
Atp1a2
Slc35b1
Rnf5
Agpat1
Ager
Ier5l
Cct8
Zfp821
Lmnb2
Uvssa
Utp3
Wdr92
Pno1
Actr3
Tarbp1
Arl2
Pum3
Atg16l2
Nfib
1700029I15Rik
Fstl3
Ephb2
Ilf2
Chmp7
Dapk3
Zxdc
Nudt2
Kif24
Get1
Acacb
Tbc1d17
Pnkp
Oacyl
Akt1s1
Ints10
Cfap20
Slc30a5
Mrpl21
Ighmbp2
Dqx1
Poldip3
Ankhd1
Ube2c
Dgat1
Dnm2
Rbbp6
Arl4d
Frmd6
Nt5c3
Rbm39
Them6
Slurp1
Psca
9030025P20Rik
Txnip
Ubd
Rbbp8
Tgfbi
Rpl27
Ifi35
Col6a3
Tbc1d31
Bbs2
1700016H13Rik
Fbxo24
Ints4
Tmem145
Prr19
Pafah1b3
Fkbp3
Fancm
Tcte3
Ermard
Styxl1
Srbd1
Mdh2
Frat1
Mapkapk5
Gatad2a
Utp14b
Acsl3
Taf9
Rad17
Ak6
Nuf2
Isy1
Fdft1
Angptl4
Tmem218
Myo10
Erp27
Sorbs1
Smim17
Mtch2
Gramd1b
Tob1
Spty2d1
Lfng
Birc2
Dok3
Ddx41
Chordc1
Arhgap19
Slc25a41
Khsrp
Scrt1
Plekha1
Tpt1
Lrch4
Wdfy2
Nfe2l1
Tmem167b
Eif4enif1
Gzmm
Mrpl30
Mitd1
Mapk8ip1
Prkaca
Trip10
Gpr108
Limk2
Fchsd2
Cd79a
Serpina3n
Slc34a3
Mis12
Derl2
Gfra4
Fnbp1
Tcerg1
Oprd1
Zscan25
Rassf7
Lmntd2
Gm3435
Wnt10a
Sncg
Mmrn2
Tmem107
Mrps11
Mrpl46
Fam166a
Sirt4
Hexim1
Cspp1
Cops5
Clic4
Nfatc2ip
Tubb4b
Pip4k2b
Fam149b
Ecd
Ttc14
Kmt5c
Glrx5
Tcf3
Hes6
Rps28
Gpr84
Prdx2
Pop7
Frmd4b
Cnot3
Cct5
Atpsckmt
Cdkn2c
Klhl21
Samd4b
Gmfg
Faf1
Tomm40
Esyt2
Med6
Zswim4
Smim4
Nt5dc2
Armc1
Marchf3
Snrpc
Trib1
Zfp687
Psmd3
Nabp1
Tfg
Ccdc124
Palb2
Dctn5
Fau
Phlda1
H4c3
H1f6
Opa1
Trim7
Slc18b1
Rps12
Tsga10
Lipt1
Msmo1
Kpnb1
Sema3f
Vasp
Ppm1n
Usp20
Kifap3
BC005624
Nepn
Gopc
Fem1b
Dffb
Cep104
Prxl2b
Syngr1
Rpl3
Zfp607b
Calm1
Trim41
Slc26a8
Mapk14
Utp18
Mbtd1
Ier5
Zfpl1
Vps51
Tmem262
Cdca5
Gtf2f1
Plekhb1
Fbxw7
Pan2
Il23a
Zfp24
Stk32c
Zfand3
Rnf125
Pias4
Ttll7
Aard
Hipk2
Mideas
Nup107
Arhgap11a
Ttll5
Erg28
Emsy
Slc39a4
Ttc41
Tbxa2r
Hsp90b1
Cipc
Cactin
Nectin3
Prpf40a
Arl6ip6
Mark3
Ccnt2
Egr2
Il34
Rps3a1
Plekha7
Actn4
Rer1
Morn1
Crtc1
Srm
Npr1
Gm51425
Jund
Iqcn
AW549877
Zcchc14
Fam174c
Eps15
Fitm2
Ulk1
Psmd5
Aig1
Xrcc1
Pinlyp
Grin2c
Fdxr
Ngdn
Mdfi
Zfp654
Cggbp1
Espn
Nup133
Hspa4
Aacs
Zfp526
Dedd2
Cirbp
Spdye4b
Rbak
Inip
Gpn3
Fam216a
Kif2c
Fosb
Tm7sf2
Pde3a
Map2k7
Slc25a25
Grb2
Spink5
Bmf
Vta1
Rhbdl3
Tfap2a
Evpl
Cebpa
Ist1
Olfm1
Lig4
Abhd13
Eif4a3
Card14
Zc3h18
Sgms1
Ubl5
Pip4p1
Pin1
Osgep
Fbxl12
Apex1
Smoc2
Kpna3
Prss57
Sde2
Kcnn1
Tmco3
Dcun1d2
Rab28
Lypla2
Gale
Cks2
Smg1
Hbp1
Rgl2
Nfat5
Ap2a1
Chpf2
Abcf2
Kansl3
Fer1l5
Arhgef4
Wdr81
Tlcd2
Med23
Eif1
Nacc2
N4bp2l2
Supv3l1
Wdr27
Ltbp1
1600012H06Rik
Tbccd1
Dnajb11
Zfp574
Zfp385b
Grik5
Sdc4
Glce
Vwa1
Bod1l
Map3k7
Poc5
Mef2a
Gpatch8
Ube2d3
Rwdd1
Ift140
Cramp1l
Kcna7
3110082I17Rik
Anln
9530077C05Rik
Rel
Fam3c
Dap3
Mknk1
Eif4e
Tmem198b
Dnajc14
Rps7
Rasip1
Malt1
Izumo1
Uqcc2
Ube2a
Ubald2
Ifi30
Pstk
Hnrnpa2b1
Cbx3
Olfml2a
Nr6a1
Arf2
Uqcrq
Leap2
Gdf9
Rfxank
Nr2c2ap
Gm45929
Npc2
Isca2
Aebp2
Mthfd2
Mob1a
Rnf7
Hdac1