ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX450828 | Hair follicle stem cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◣ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Jag2
Rnf44
Cdhr2
1700016H13Rik
Lrrc56
Hras
Txndc11
2900026A02Rik
Fstl3
Prss57
Tecpr1
Cbr3
Spc25
G6pc2
Vmn2r102
Denr
Lfng
Rps27l
Tjp3
Pip5k1c
Arhgef4
Junb
Hook2
Plekha1
Tmem129
Tacc3
Slbp
Kremen1
Limk2
Gm7244
Prdm10
Cnot6
Tfap2a
Ptcd2
Mrps27
Qrich1
Qars
Id2
Fam20b
Dhrs3
Idh3b
Pa2g4
Iqch
Aagab
E030030I06Rik
Akirin1
Ajuba
Mtf2
Zscan25
Col7a1
Serpinb5
Mia2
Aph1b
Git2
Ankrd13a
Niban2
Gipc1
Kctd2
Atp5h
Vwa1
Mark4
Exoc3l2
Letm1
Slc30a5
Ulk1
Por
Evpl
Rhbdd3
Ewsr1
Cdhr4
Inka1
Uba7
Fbxo9
Cilk1
Cenpe
Fus
Plekhg6
Cd164
Prox2
Dlst
Myo6
Calm3
Fer
Wdr45
Polg
Tmem41b
Sncg
Mmrn2
Sh3bp1
Cmc2
Cenpn
Rita1
Ddx54
Raly
Taf15
Mmp28
Sema4b
Itgb4
Cic
Nfatc1
Dnmt1
Polr3g
Mblac2
Gli2
Hsf1
Bop1
Phlda3
Ccdc85c
Was
Prkdc
Mcm4
Reep4
Hr
Ttll10
Adnp
Susd6
Gnai2
Tardbp
Rnf14
Akt2
Dut
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Fbxw4
Mfsd4b4
Sspn
Zfp296
Gemin7
Rpn2
Mroh8
Dst
Ifi30
Pik3r2
Ube2d3
Castor1
Psip1
Btbd2
Shmt2
Ndufa4l2
Dsc3
Ptdss1
Mterf3
Rbbp6
Diaph1
Flcn
Styxl1
Mdh2
Serpinb10
Zfp607b
Fam83b
Zmynd8
Pmaip1
Sirt4
Septin11
Ndrg1
Acacb
Tpt1
Tipin
Ppm1l
Fam167a
Arl2
Cldn34d
Ndst1
Camsap3
Cd47
Vmn2r72
Sash1
Pard6g
Gnb2
Usp20
BC005624
Prkci
Wasl
Bcl9l
Xpc
Lsm3
Irf6
Itga2
Gna15
Noct
Ly6g6f
Abhd16a
Cenpp
Col6a6
Hsd11b2
Per2
Iffo2
Rnf38
Rgl2
Wdr46
Pfdn6
Cpped1
Bcl6
Ubr4
Ift27
Golim4
Tgfbi
Rgs12
Myl12a
Eea1
Kctd17
Fzr1
Dohh
Smim24
Gm48552
Ube2b
Cdkl3
Rbm39
Topors
Smim27
Ndufb6
Atg16l2
Sema3b
Eif5
Sgms1
Hdac2
Unk
H3f3b
Myl12b
Nrbp2
Aldh9a1
Zcchc14
Smg1
Cln8
Trappc3
Map7d1
Syne4
Sdhaf1
Wrap73
Trp73
Cnot1
Crtc1
Cstb
Bnc1
Cdkn1a
Ier2
Crybg1
Dazap2
Cdt1
Aprt
Cwc22
Slc26a8
Mapk14
Rpgrip1l
Fto
Abr
Top1mt
Irf2bp2
Lrp1
Srxn1
Ing1
Cars2
Rps3a1
Mif
Atp6v0c
Amdhd2
Sema3f
Dnajb4
Fubp1
Aunip
Slc26a6
Rmnd5a
Sesn1
Frat2
Fxyd3
Zfp277
Dock4
Cbx8
Phrf1
Hexb
Itpkc
Coq8b
Nemf
Uros
Bccip
Vamp4
Smc3
Arid3c
Sigmar1
A930018P22Rik
Wnt10a
Creld2
Alg12
Esyt2
Tspyl1
Snapc3
Vmn1r20
Tmem260
Wnt4
U2af1
Birc2
Fam149b
Ecd
Nup153
Cav1
Kmt2a
Slc35e1
Nol11
Nudt18
Mdm2
Nmt2
Lrrc24
C030006K11Rik
Dusp7
Cerk
Pknox1
Snap47
Jmjd4
Mapkapk5
Supv3l1
Tmem134
Aip
Rbm4b
Itga3
Zbtb7b
Grb10
Puf60
Clec4n
Atrnl1
Isy1
Lrpprc
Cep63
Anapc13
Ireb2
Lmbr1l
Rab5c
Cse1l
Rap2b
Fau
Tm7sf2
Eif4a1
Znhit2
Mrpl49
Senp3
Tnfsf13
Lgals7
Jade2
Smim4
Nt5dc2
Kpnb1
Srm
Ebpl
Mtmr11
Psapl1
Rapgefl1
Ss18
Rab33b
Fam3c
Ppdpf
Car5a
Banp
Ankrd40
Ptov1
Jpt2
Lancl2
Psmb2
Uhrf2
Arhgef19
Tmem209
Ssmem1
Zc3h18
Fbxl22
Prkx
Atg12
Ap3s1
Bod1l
Pitpnm3
Pkp3
Abhd18
1700034I23Rik
Get4
Tnrc18
Ndst2
Men1
Map4k2
Cdiptos
Cdipt
Tigd5
Eef1d
Shc1
Atf7
Pygo2
Pbxip1
Tead3
Neurl1b
Asah1
Ranbp2
Calhm1
Calhm2
Mindy2
Phf12
Tcf3
Usp22
Slc4a2
Cdk5
Rnf4
Taf4b
Prdx1
Aldh4a1
Selenow
Pfdn4
Ppp1cb
Fzd6
Pwwp3a
Qrich2
Tmem125
Slc34a3
Fam166a
Tubb4b
Olfr1274
Met
Mansc1
Pnrc1
Borcs5
Fam189a2
Aktip
Atl2
B230219D22Rik
Zfp219
Tmem253
Hes6
Eif4a3
Card14
Cd9
Atf3
Ankar
Urah
Tst
Mpst
Bbs2
Asph
Rps28
Rsph3b
P2ry1
Gan
Rpl13
Kank3
Abca7
Ncaph
Itpripl1
Anxa2
Sod2
Tex21
Mthfd1
Cyp2c66
Rassf7
Lmntd2
Frat1
Sfn
Zfp319
Usb1
Hspa4
Lig4
Abhd13
Ints13
Fgfr1op2
Kdm1a
Slc15a4
Tex46
Aacs
Akap11
Edrf1
Emilin1
Ost4
Micos10
Nxnl1
Slc27a1
0610009B22Rik
Tmem139
Casp2
Mysm1
BC005537
Tmem19
Ttc14
Vgll4
Agpat5
Klhl25
Wdr77
Atp5pb
Ube2a
C330007P06Rik
Marchf7
Gga1
Sdc1
Uroc1
Chst13
Cltc
Pip4k2b
Dcaf10
Olfr1416
Ndufa10
Mfsd9
Il31ra
Cd209a
Actr3
Thap12
Flnb
Fbxo5
Rtn3
Cks2
Secisbp2
Sik2
Grk6
Zfp518a
Mtmr14
Baz2a
Nphp4
Kcnab2
Atp5b
Zfpl1
Vps51
Tmem262
Cdca5
Zbtb40
Gm550
Ralbp1
Galnt18
Sbf1
Adm2
Pacs1
Samd4b
Gmfg
Ppp6r1
Wdr45b
Mfsd3
Aen
Recql4
Lrrc14
Cd68
Dicer1
Rrm2b
Ppp1r13l
Cd3eap
Map2k7
Zfyve21
Xrcc3
Pus1
Ep400
Brpf1
Atg16l1
Tgfbr3l
Phospho1
Adamtsl5
Nyx
Lsm1
Bag4
Ss18l2
Nktr
Btg2
Mideas
Mmaa
Cobll1
Luc7l2
Gtf2h3
Eif2b1
Cds1
Ndufb1
Cpsf2
Proser1
Nhlrc3
Eef2
Msmo1
Pias4
Nup50
Rragc
Zzz3
Spink5
Dap3
Zdhhc5
Pkm
Tas1r1
Nol9
Bzw2
Ankmy2
Sp4
Phlda1
3110082I17Rik
Naa40
Lss
Klf2
Tigar
Tgm5
Stk11
Mrpl2
Klc4
Cul7
Col8a2
P4hb
Arhgdia
Ranbp3
Zbtb2
Vsir
Flna
Emd
Vwa2
Fam204a
Dzip1l
Hyal2
Hyal1
Mat2a
Naa80
Hyal3
Unc50
Coa5
Krt5
Capns2
Mex3c
Zfp68
A430033K04Rik
Rps29
Lrr1
Tnnc2
Ankhd1
Ube2c
Grb2
Anln
9530077C05Rik
Smarca5
Exoc3l
E2f4
Elmo3
Mfsd8
Impact
Cwc27
Tmem198b
Dnajc14
Slc25a42
Zbtb32
Kmt2b
Sdf4
B3galt6
Eif3b
Kifc5b
Srsf1
Ccar1
Rab14
Apc
Fam168a
Csrp1
Madd
Mef2a
Meis1
Baz1b
Arf3
Slc5a10
Espn
Tcf19
Pou5f1
Cchcr1
Lcmt1
Sap18b
Sap18
Arhgap17
Etfa
Sema3e
Slc46a3
Cyp2b10
Mon2
Frmd6
Syvn1
Clcn3
Nek1
Atp8a1
Crebrf
Fkbp3
Fancm
Mfap3l
Vamp2
Per1
Amh
Sf3a2
Plekhj1
Arhgap35
Tmem183a
Adrm1
Tmem170b
Rpl22
Rnf207
Slc25a30
Zfand3
Xpnpep3
St13
Dnajb7
Fzd2
Xpo1
Msh6
Arid5b
Tspan4
Polr2l
Cd151
Atf2
Sun1
Tubg1
Retreg3
Sympk
Dnajc30
Bud23
Foxa3
Cracr2b
Taok2
Nup62
Il4i1b
Atf5
Hes3
Gid4
Pdia4
Eed
Eif4e
Pdik1l
Cfap97
Cnot8
Ptma
Llgl1
Slc20a1
Son
Gm36712
Gart
Arfgap3
Tfg
Fosl1
Ccdc85b
Tada3
Arpc4
Herc2
Ppp3cb
Wfs1
Adam10
Tnip2
Tpd52
Dgat2
Kat7
Dot1l
Prpf40a
Arl6ip6
Supt4a
Lrp5
Mark3
Snrnp70
Cdkn2c
Faf1
Dlgap4
Myh9
Shfl
Ppan
Angptl6
Dcxr
Cbr2
Gpcpd1
Dzip1
Usp53
Cops4
Dnpep
Dyrk1b
Ap1g1
Ric8b
Rad23b
Pak6
Nup214
Lrrfip1
Ppp2r1a
Kdm6a
Mnt
Scarb2
Dennd2c
Cryzl2
Bhlhe40
Acap2
Megf9
Cc2d1b
Wdr78
Mier1
Mfap4
Mapk7
Gpatch8
Abcf3
Zdhhc1
Ptcd3
Polr1a
Tsga10
Lipt1
Greb1
Nkx2-6
Kpna1
Wwox
Fam53c
Cdc25c
T2
Rab11fip4
Abhd6
Olfr806
Arrdc4
Cenpu
Smim41
Atg101
Myh14
Arntl
Caskin1
Arid4a
Uchl3
Tusc2
Uqcrh
Lrrc41
Eapp
Galnt10
Pgp
Mlst8
Bricd5
Tex14
Frmd4a
Col16a1
Zbtb4
Slc35g3
Polr2a
Sec14l1
Trir
Lsg1
Sp2
H2-DMa
Brd2
Paxip1
Pik3r3
Slc14a2
Flad1
Cks1b
Zfp143
G3bp1
Atox1
Lenep
Get3
Sharpin
Maf1
Cyc1
Fbxo33
Taf6
Mblac1
Cnpy4
Cul2
Bzw1
Gm35339
Robo1
Ccser2
Zfp949
Olfr855
Olfr854
Oxr1
Ankrd54
Mylip
Nol6
Ska2
Prr11
Rfx1
Dpp9
Trappc9
Pkia
Abhd2
Hexim2
Fgd4
Top2a
Med1
Cdk12
Ttc39d
Rpl19
Cacnb1
Dync1h1
Slc35e2
Rbm25
Osbpl1a
Paip2b
Hjurp
A730008H23Rik
Fbxl14
Smg9
Stat1
Rpgrip1
Hnrnpc
Znhit1
Plod3
Cdca7l
Ubald1
Mgrn1
Rab5b
Pmel
Cdk2
Mtss2
Hmox2
Ap2m1
Dab2ip
Eif2ak3
Traf2
Zfp869
Calml3
Rlbp1
Fanci
Rnasek
0610010K14Rik
Zfp469
Taf12
Gmeb1
Tcp11l2
Tepsin
Ndufaf8
H3c15
H3c14
H2ac19
H2ac18
Osbp
Mmp15
Cox8c
Tmem250-ps
Gm5165
Stat3
Fam227a
Cby1
Rusc2
Igsf8
Sp1
Slc1a1
Tjp2
Tom1
Tnrc6b
Gtf2a1
Arhgef1
Etv5
Wasf1
Fam227b
Dtwd1
Cdc40
Dnajc16
Casp9
Ahnak
Tbck
Aimp1
Mvk
Mmab
Gm3448
Gm3417
Gstm5
Pole3
Alad
4933430I17Rik
Slc39a3
Yif1b
Kcnk6
Amotl2
Trpm4
Rab11b
Hrc
Id1
Htra2
Aup1
Nmral1
Tle3
Ctnnb1
Nme1
Stip1
Camta1
Atp5g1
Atp1a2
Slc35b1
Ap3m2
Rnf5
Agpat1
Ager
Ier5l
Cct8
Zfp821
Lmnb2
Setd4
Cbr1
Uvssa
Utp3
Limch1
Wdr92
Pno1
Tarbp1
Sec22c
Pum3
Nfib
1700029I15Rik
Bsdc1
Ephb2
Aadacl2fm1
Ilf2
Chmp7
Dapk3
Zxdc
Nudt2
Kif24
Get1
Tbc1d17
Pnkp
Oacyl
Akt1s1
Ints10
Cfap20
Gfpt1