ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4554102 | 3T3-L1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◣ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Cldn34d
Kmt2a
E030030I06Rik
Slc39a10
Txndc11
Nup107
Denr
Tmem18
Dagla
Hnrnpa2b1
Cbx3
Haspin
Cenpu
Abca3
Abca17
Ddx17
Lyz2
Aldh18a1
Wwox
Rnf44
Cdhr2
Gpr137
Bad
Kcnk4
Baz2a
Cwc22
Speer4e
Zfp668
Zfp646
Snx12
Hgsnat
Qrich1
Qars
Tmem125
Kansl3
Fer1l5
Med1
Cdk12
Ints10
Psmd5
Slc25a25
Cutal
Naif1
Arl4d
Zfp523
Styxl1
Mdh2
Vmn1r2
Vmn1r3
Fut10
Smim41
Atg101
Eapp
Polq
Afg3l1
Ube2d3
Cipc
Rbm39
Tex14
Ncbp3
Eps15
Spdl1
Cyb561d1
Atxn7l2
Bzw1
Adgrl1
Gm51573
Mettl18
BC055324
Eif4a3
Card14
Slc26a8
Mapk14
Speer4d
Pradc1
Cct7
Stxbp4
Cox11
Zfp41
Nudt3
Arl14ep
Wdr77
Atp5pb
Poldip3
Arf3
Coq9
Ciapin1
Fbxw4
Septin7
Rps19
Ube2z
Tcam1
Smarcd2
Ube2i
Zzz3
Speer4f1
AW549877
Dux
Gm4981
Prpsap1
Hjurp
A730008H23Rik
Epc2
Lamp1
Tab1
H3c15
H3c14
H2ac19
H2ac18
Rhoc
Rnf115
Polr3c
Capn15
Pcbp2
Gm9758
Mthfd2
Mob1a
Dnajb4
Fubp1
Tmed9
B4galt7
Gpx8
Kif2c
Rad1
Brix1
Gins3
Trim7
Trim41
Hspa4
Slc25a10
Mrpl12
Mdm2
Gm21190
Proser1
Nhlrc3
Arhgef1
Cd79a
Dffb
Cep104
Zfp142
Bcs1l
Gins2
Mrnip
Hdgf
Yipf4
Fam53c
Cdc25c
Sirt4
Slc39a4
Cpsf1
Gm10354
4931408C20Rik
Ppp1r11
Znrd1as
Znrd1
Nfkbiz
Mtf2
Glce
Ift46
Arcn1
Vps36
Ckap2
Cpsf6
Mcph1
Pfdn5
Myg1
Gm3448
Gm3417
Cct8
Tcte3
Ermard
Ireb2
Ska2
Prr11
Atf7
Ptcd2
Mrps27
Ect2
Slc25a4
Tardbp
Asic1
Smarcd1
Nudt1
Drd3
Cops4
Banf1
Eif1ad
Adgrf2
Usp3
Tfb2m
Cnst
Mrpl21
Ighmbp2
Ttc39d
Ahctf1
Cox7a2
Cnot8
Nsun3
Atf2
Insr
Rpl7l1
2310039H08Rik
Gm7244
Prdm10
Washc1
Ndufv2
Xpc
Lsm3
Ttc14
Dnajc7
Nkiras2
Tmem107
Exosc6
Smc2
Hps6
Armh3
Slc35e3
Pfkfb2
Yod1
Rps28
Ppil1
BC004004
Sgms1
Ncbp2
0610012G03Rik
Dck
Kazald1
Ssbp2
Lyz1
Flcn
Sfi1
Eif4enif1
Ddx20
Eif4g2
Dicer1
Mak16
Mettl1
Eef1akmt3
Cyp27b1
Slc39a9
Erh
Tbpl1
Tomm22
Ddhd2
Taf12
Gmeb1
Gm13290
Gm13289
Gm13285
Ifnz
Gm13272
Gm13279
Gm13278
Gm13275
Gm13277
Gm13276
Myef2
Cdkn2aipnl
Arid1a
Gm17019
Cmc2
Cenpn
Rubcn
Rraga
Fyttd1
Creld2
Alg12
Rbm25
Rab33b
Gtse1
Zbtb4
Slc35g3
Polr2a
Rap2b
Phf23
Gabarap
Dvl2
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Rfwd3
Ppm1l
Srp68
Galr2
Rpn2
Mroh8
Pdia5
Ssrp1
P2rx3
Ankrd17
Smim10l1
Lrpprc
Txnip
Wdr27
1600012H06Rik
Stat1
Ankfy1
Spring1
Rnft2
Lsm5
Anxa6
C1qbp
Myl12a
D16Ertd472e
Ddx42
Ccdc47
Calm3
Brpf1
Smg8
Gtf3c6
Kif20b
Nup35
Rgl2
Tapbp
Tut7
Sod2
Ints13
Fgfr1op2
Kdsr
Micu3
Dbr1
Armc8
Ndufa5
Asb15
Akr1b3
Tigd5
Eef1d
Zcchc4
H2aj
H4f16
Cops6
Zfp113
Ska3
Mrpl57
Pxmp2
Pole
Fam133b
Gga1
Scamp1
Gfm1
H2bc6
H1f4
Wdr90
Mcrip2
Tln1
Creb3
Fbxl14
Greb1
Nkx2-6
Kpna1
Tjp3
Pip5k1c
Iqch
Aagab
T2
Phrf1
Prkdc
Mcm4
Cnot6
Gipc1
Il31ra
Rab11fip4
Hexb
Mia2
Cerk
Cdiptos
Cdipt
Pknox1
Rita1
Por
Ddx54
Rpl22
Rnf207
Tmem129
Tacc3
Slbp
Ccdc85c
Abhd6
Git2
Ankrd13a
Jag2
Olfr806
Taf15
Mmp28
Sspn
Arrdc4
Septin11
Kctd2
Atp5h
Gnai2
Atg12
Ap3s1
Akirin1
Wdr45
Rmnd5a
Dut
Asah1
Was
Sash1
Hyal2
Hyal1
Myh14
Fus
Ndufb1
Cpsf2
Aldh4a1
Prox2
Cln8
Dnmt1
Ptov1
Ift27
Tmem260
Hdac2
Arntl
Bhlhe40
Fzr1
Dohh
Caskin1
Arid4a
Ndst2
Uchl3
Cd209a
Tusc2
Uqcrh
Lrrc41
Psip1
Ptcd3
Polr1a
Tada3
Arpc4
Smim24
Gm48552
Prkci
Shc1
Galnt10
Ptdss1
Mterf3
Noct
Madd
Pgp
Mlst8
Bricd5
Frmd4a
Eif3b
Irf2bp2
Cenpe
Cenpp
Ss18
Col16a1
Eed
Wasl
Bcl6
BC005537
Sec14l1
Aldh9a1
Junb
Trir
Lsg1
Sp2
Atrnl1
Polg
2900026A02Rik
Gnb2
Ube2b
Cdkl3
Itgb4
Cbr3
H2-DMa
Brd2
Paxip1
Rtn3
Pik3r3
Slc14a2
Raly
Flad1
Dlst
Cks1b
Zfp143
G3bp1
Atox1
Lenep
Mat2a
Get3
Sharpin
Maf1
Cyc1
Fbxo33
Tst
Mpst
Uros
Bccip
Mtmr14
Cwc27
Taf6
Mblac1
Cnpy4
Srxn1
Vmn2r102
Diaph1
Cul2
Rps29
Lrr1
Cltc
Trappc3
Map7d1
Smc3
Tspan4
Polr2l
Fam20b
Cd151
Gm35339
Robo1
Ccser2
Ajuba
Cd164
Rps27l
Zfp949
Olfr855
Olfr854
Oxr1
Dot1l
Ankrd54
Ppp1r13l
Cd3eap
Tecpr1
Ly6g6f
Abhd16a
Rhbdd3
Phlda3
Dgat2
Mylip
Pa2g4
Cdhr4
Zfp219
Tmem253
Nol6
Rfx1
Dpp9
Trappc9
Pkia
Abhd2
Hexim2
Fgd4
Top2a
Ewsr1
Dhrs3
Rpl19
Cacnb1
Dync1h1
Lrrc56
Hras
Slc35e2
Osbpl1a
Paip2b
Smg9
Mfsd8
Nphp4
Kcnab2
Tmem41b
Rpgrip1
Hnrnpc
Znhit1
Plod3
Eef2
Cdca7l
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Ubald1
Mgrn1
Rab5b
Pmel
Cdk2
Ubr4
Akt2
Mtss2
Hmox2
Selenow
Ap2m1
Ttll10
Dab2ip
Eif2ak3
Traf2
Zfp869
Calml3
Rlbp1
Fanci
Rnasek
Pfdn4
0610010K14Rik
Zfp469
Tcp11l2
Tepsin
Ndufaf8
Osbp
Nemf
Kremen1
Mmp15
Inka1
Atp6v0c
Amdhd2
Cox8c
Bzw2
Ankmy2
Tmem250-ps
Gm5165
Tnnc2
Stat3
Cnot1
Atp5b
Per2
Fam227a
Cby1
Cdt1
Aprt
Rusc2
Igsf8
Idh3b
Sp1
Slc1a1
Tjp2
Tom1
Tnrc6b
Unk
H3f3b
Abhd18
1700034I23Rik
Gtf2a1
Snap47
Jmjd4
Etv5
Wasf1
Fam227b
Dtwd1
Cdc40
Frat2
Dnajc16
Casp9
Ahnak
Tbck
Aimp1
Mvk
Mmab
Gstm5
Susd6
Pole3
Alad
4933430I17Rik
Slc39a3
Uba7
Yif1b
Kcnk6
Amotl2
Trpm4
Rab11b
Hrc
Ss18l2
Id1
Cic
Htra2
Aup1
Nmral1
Tle3
Ctnnb1
Reep4
Hr
Dst
Nme1
Niban2
Stip1
Get4
Arid3c
Camta1
Hook2
Sigmar1
Atp5g1
Atp1a2
Slc35b1
Ap3m2
Rnf5
Agpat1
Ager
Bcl9l
Ier5l
Zfp821
Lmnb2
Setd4
Cbr1
Uvssa
Nktr
Crybg1
Utp3
Limch1
Wdr92
Pno1
Actr3
Tarbp1
Sec22c
Arl2
Pum3
Atg16l2
Nfib
1700029I15Rik
Bsdc1
Fstl3
Ephb2
Aadacl2fm1
Ilf2
Chmp7
Dapk3
Zxdc
Nudt2
Kif24
Get1
Acacb
Tbc1d17
Pnkp
Oacyl
Akt1s1
Cfap20
Slc30a5
Gfpt1
Dqx1
Ankhd1
Ube2c
Dgat1
Dnm2
Rbbp6
Frmd6
Nt5c3
Them6
Slurp1
Psca
Sema3b
9030025P20Rik
Ubd
Rbbp8
Tgfbi
Rpl27
Ifi35
Col6a3
Tbc1d31
Bbs2
1700016H13Rik
Fbxo24
Ints4
Tmem145
Prr19
Pafah1b3
Fkbp3
Fancm
Srbd1
Frat1
Mapkapk5
Gatad2a
Utp14b
Acsl3
Taf9
Rad17
Ak6
Nuf2
Isy1
Fdft1
Angptl4
Tmem218
Myo10
Ier2
Erp27
Myadm
Sorbs1
Smim17
Mtch2
Gramd1b
Tob1
Spty2d1
Lfng
Birc2
Dok3
Ddx41
Chordc1
Arhgap19
Slc25a41
Khsrp
Scrt1
Plekha1
Tpt1
Lrch4
Wdfy2
Magi1
Nfe2l1
Tmem167b
Gzmm
Mrpl30
Mitd1
Mapk8ip1
Prkaca
Trip10
Gpr108
Rgs3
Limk2
Fchsd2
Serpina3n
Slc34a3
Mis12
Derl2
Gfra4
Fnbp1
Tcerg1
Oprd1
Zscan25
Rassf7
Lmntd2
Gm3435
Fxyd3
Wnt10a
Sncg
Mmrn2
Mrps11
Mrpl46
Cyth1
Fam166a
Hexim1
Cspp1
Cops5
Clic4
Nfatc2ip
Tubb4b
Pip4k2b
Nt5c2
Fam149b
Ecd
Kmt5c
Smim38
Glrx5
Tcf3
Hes6
Gpr84
Rarg
Prdx2
Pop7
Frmd4b
Cnot3
Cct5
Atpsckmt
Cdkn2c
Klhl21
Samd4b
Gmfg
Faf1
Tomm40
Esyt2
Med6
Zswim4
Smim4
Nt5dc2
Armc1
Marchf3
Snrpc
Trib1
Zfp687
Psmd3
Nabp1
Tfg
Ccdc124
Palb2
Dctn5
Fau
Phlda1
H4c3
H1f6
Opa1
Slc18b1
Rps12
Tsga10
Lipt1
Msmo1
Kpnb1
Sema3f
Vasp
Ppm1n
Usp20
Kifap3
BC005624
Nepn
Gopc
Fem1b
Prxl2b
Syngr1
Rpl3
Zfp607b
Calm1
Rsph3b
Utp18
Mbtd1
Ier5
Col6a6
Zfpl1
Vps51
Tmem262
Cdca5
Gtf2f1
Plekhb1
Fbxw7
Pan2
Il23a
Zfp24
Stk32c
Zfand3
Rnf125
Rab4b
Mia
Pias4
Ttll7
Aard
Hipk2
Mideas
Arhgap11a
Ttll5
Erg28
Emsy
Ttc41
Tbxa2r
Hsp90b1
Cactin
Sec23b
Rbbp9
Nectin3
Prpf40a
Arl6ip6
Mark3
Ccnt2
Egr2
Il34
Rps3a1
Plekha7
Actn4
Rer1
Morn1
Crtc1
Srm
Npr1
Gm51425
Jund
Iqcn
Zcchc14
Fam174c
Fitm2
Ulk1
Aig1
Xrcc1
Pinlyp
Grin2c
Fdxr
Ngdn
Mdfi
Zfp654
Cggbp1
Espn
Nup133
Aacs
Zfp526
Dedd2
Cirbp
Spdye4b
Rbak
Inip
Gpn3
Fam216a
Kctd14
Fosb
Tm7sf2
Pde3a
Map2k7
Grb2
Spink5
Bmf
Vta1
Rhbdl3
Tfap2a
Evpl
Cebpa
Tsc22d1
Ist1
Olfm1
Lig4
Abhd13
Zc3h18
Ubl5
Pip4p1
Pin1
Osgep
Fbxl12
Apex1
Smoc2
Kpna3