ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15046886 | MEF
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◢ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◣ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Txndc11
Rnf44
Cdhr2
Aard
Oprd1
Gm3739
Galnt9
Vasp
Ppm1n
Rtn2
Dab1
Cldn34d
Adamts19
Pde3a
Mmp15
Galr3
Gm5165
Adcyap1r1
Wnt10a
Plvap
Reep4
Hr
Dpysl4
Lrrc3b
Ccdc3
Garem2
3110082J24Rik
Tpbgl
C2cd4b
Prkcz
Rftn1
Arrdc4
Vtn
Sarm1
Yif1b
Kcnk6
Plekha7
P2ry1
Ampd3
Bmp2
Gm2237
Nt5c2
Ina
Adcy8
Celsr1
Mad2l2
Draxin
Prtg
Bmp7
Cnnm3
Adamts15
Ccdc85c
Igfbpl1
Ier5l
A830018L16Rik
Lrrn4
Reln
Ascl2
Srm
Tjp3
Pip5k1c
Plxnd1
Cabp7
Trarg1
Bhlha9
Adcy9
Kcnk12
Ubd
Olfr94
Cnnm1
Ret
Synm
Efcc1
1810020O05Rik
Pm20d2
Insyn1
St6galnac2
1700001C19Rik
Guca1a
Prkcq
G3bp1
Atox1
Sharpin
Maf1
Cyc1
Gm35339
Sema3f
Gxylt2
Gjd3
Gatad2a
Gm3752
Syt10
Homer2
Emb
Gcnt1
Gm3411
Vps13c
C2cd4a
Rapgef5
Fgfbp3
Btaf1
Trnp1
Kcnq4
Kcns2
Gda
Tcea2
Sox18
Fam189a1
Shisa9
Mroh5
Gm6569
Adcy3
Slc22a3
Gfra4
Kbtbd13
Rasl12
H3c15
H3c14
H2ac19
H2ac18
Pakap
Btbd11
Prima1
Fdft1
Pax4
Egfem1
Zfp143
Ptf1a
Pax3
Plag1
Chchd7
Kctd1
Htra4
Ak5
Tmem179
Fnbp1
Gipc1
Usp13
Dact2
Jpt2
Tarbp1
Nkx1-2
Rhbdl3
Oxr1
Kcnh1
Zmiz1
Tpcn1
Iqcd
Zfyve28
Cfap99
Dock8
Igdcc3
Nkd2
Rnf165
Olig1
Wnt3a
Igfbp5
Gbx2
Fam53c
Cdc25c
Mlxipl
Osbp
Fbn2
Irx4
Calm3
Zbtb16
Slit3
Kctd12
Prkaca
Dipk1c
Kmt2a
Sall4
Ptger3
Foxi3
Slc35f3
Adamts2
Nrg2
Spsb3
Nubp2
Nme3
Mrps34
Igfals
Eme2
Slc24a2
Stum
Tmem132b
Car15
Fgfr1
Shisa8
Adrb1
Gm5796
Dusp2
Astl
Gm10406
Wnt3
Egr2
Ado
Ffar4
Tmem200c
Ap2a1
Lrrn2
Rerg
Unc5a
Nae1
Car7
Kcnip3
Ephb1
Cdh4
Xpc
Lsm3
Eya2
Ntsr2
Rgs9bp
Ankrd27
Col27a1
Qrfpr
B3gat1
Rasef
Zfp593
Gm30191
Grrp1
Phpt1
Mamdc4
Ajm1
Gm38538
Pcdh1
Jph3
Nefl
Sptbn4
B3gnt7
Gabra5
Atp1a3
Slc6a17
Shc2
Odf3l2
Adcy1
1700067K01Rik
Misp3
Palm3
Enox1
Hs3st4
Unc5b
Paip2b
Sorcs1
Dlk1
Scn1b
Tepsin
Ndufaf8
Tppp
Galnt13
Ppp2r5a
Stox1
St6gal2
Tcf19
Pou5f1
Cchcr1
Gse1
Kcnma1
Fam43b
Zfp869
Pax6
Rasgrf2
Stip1
Ttc9
Ankrd54
Fzd10
Ednrb
Gm3696
N4bp2l1
B4galt6
Gldn
Gm3667
Dynlt1b
Foxe3
Col19a1
Ankrd34b
Cnot3
Rpn2
Mroh8
Vangl1
Kcnb2
Sp2
Gja3
Cby3
Tmie
Als2cl
Tmem158
Tbl1xr1
Atp1b1
Hmgn1
Lonrf2
Dhh
Traf2
Aktip
Wnt4
Flt3
Gsg1l
Reep1
Shisa2
Adamtsl3
Spint1
Ppp1r14d
Abhd2
Dmrt2
Kif7
Qrfprl
Tmem121
Kcnq3
Gng13
Chtf18
Dach1
Mafa
Adgrb1
Grid1
Insm2
Dock10
Samd4b
Gmfg
Irx2
Ush1g
Otop2
S1pr5
Keap1
Hyou1
Nsg1
Atoh8
Pkp1
Adrb3
Ngf
Fam78b
Lrrc75b
Ggt1
Cul2
Cacnb2
Acan
Slc24a4
Gdf7
Aplp2
Lysmd2
Aph1c
Hhipl1
Foxs1
Adora1
Dusp15
Rrbp1
Ky
1190005I06Rik
E030030I06Rik
Rab11fip4
Htra3
Arid3c
Sigmar1
Gas1
Dctn3
Kndc1
Zfp385b
Trappc6a
Bloc1s3
Ebf4
Prex2
Efhd1
Zfp654
Cggbp1
Lrrc10b
Gm3500
Smoc2
Colgalt2
Shh
Kank4
Fut9
Cdh23
Chst3
2810459M11Rik
Sost
Tnnc2
Ube2c
Gm3636
Cacna2d2
Pde1b
St8sia1
Xylt1
Grin3b
Ube2b
Cdkl3
C130074G19Rik
Onecut3
Skor1
Kit
Igfbp3
Rnf144b
Sema5b
Fam163b
Pmp22
Lurap1l
Tmem30b
Zbtb7c
Kank1
Islr2
Tbx20
Atp5g1
Gpr27
Wnt5b
Cyp46a1
Sdk2
Psd
Fbxl15
Kcns1
Fzd2
Prph
Dgka
Pym1
Pygo1
Pdlim1
Vax1
Cnnm2
Smim12
Rnf125
Olig2
Ctnnd2
Drd5
Rims4
Gpr84
Svep1
Plxnc1
Erich1
Dlgap2
Fbln7
H1f10
Ghsr
Syndig1
Arid4a
Atp8b1
Ttc41
Hsp90b1
Kcna7
Ntf5
Tbx21
Pdik1l
Gjc2
Ripply2
Cyb5r4
Nol4l
Insyn2a
Zdhhc20
Sstr1
Prdm13
Cnr1
Cwc27
Snx20
Plekho2
Pif1
Clip4
Dgcr8
Wscd1
Wnt1
Col13a1
Sertm1
Klf10
Tgfa
Tnfrsf21
Neurod2
Xcr1
Fyco1
Galnt16
Npas1
Nfatc2ip
Recql
Golt1b
Pdzrn3
Trim71
Abtb2
Deptor
Pigq
Nhlrc4
A930017K11Rik
Rap1gap2
Tmem178
Itga4
Lama1
Cftr
Sap130
Susd1
Ensa
Dennd5b
Vps26a
Cdkn3
Cpm
Camk2b
Man1c1
Ptprt
Ncapd2
Mrpl51
Smtnl2
Tfdp1
Gm20346
Anp32a
Arpp21
Helt
Ppic
Nmbr
Htr1b
Hmx1
Ska2
Prr11
Sun1
Slc22a23
Ppp2r2c
Mvk
Mmab
Gm51425
Mxd4
Sptbn2
Slc43a1
Tmem210
Lrrc26
Bves
Trappc9
Lrrfip1
Bhlhe23
Map3k5
Mmd
Bmper
Zfp853
Ift27
Ankhd1
Slc39a4
Cpsf1
Mei1
Chadl
Tldc2
Soga1
Mfsd13a
Wnt7a
Kl
Prtn3
Plppr3
Mxd1
Snrpd2
Qpctl
Pla2g6
Stx16
Efnb2
Dpf3
Rassf10
Jakmip1
Trpm4
Hrc
Cbln4
Cdca7l
Setx
Nav2
Zfp879
Grm6
Eva1a
Kcnq1
H60b
Tmem215
Flcn
Nptxr
Rfx2
Kpnb1
Hsd11b2
Zfp960
Gabbr2
Nemp1
Fam83d
Ccdc177
Ubald2
Maea
Npc2
Isca2
Trim47
Tmtc4
Pde8b
Fbxo41
Egr4
Nt5e
Mto1
Cgas
Plxna2
Calhm6
Ap3m2
Rps6ka5
Baiap2
Rai1
Far1
Wnt2
Tnrc6b
Ascl4
Pitpnm1
Cdk2ap2
Klf11
Slc30a10
C2cd2
Fbrsl1
Nrxn2
Kcnk15
Wasf1
Cdc40
Vav3
Plekhd1
P2rx5
Ptbp1
Mapt
Sst
Hdac9
Ube2ql1
Lhx3
Adamts18
Vps26b
Ncapd3
Rbm28
Prrt4
Pou3f1
Iqsec3
Dsg2
Creb3l2
Mreg
Tmem129
Tacc3
Slbp
Gm7244
Prdm10
Slc2a13
Ednra
Clec2l
Fgf3
Gimap1
Gimap5
Clmp
Kbtbd11
Ppm1b
Sertad2
Spry1
Proser2
E2f1
Dtna
Kcnq2
Plcb1
Rcor2
Klhl40
Herc2
Fcgr3
Dcaf11
Pcbp3
Panx1
Asap1
Rgs7bp
Dll1
Neurod6
Dlgap4
Rtn4rl1
Dph1
Lingo1
Tril
Gm3488
Mex3c
Spsb4
Gm10499
Limk1
1110032F04Rik
Rab22a
Ebf1
Atoh7
Megf11
Nr2e1
C1ql1
Sfrp5
Kdm4b
Atxn3
Aldh1a3
Zbtb46
Myo1b
Tjp2
Nrp1
Htr6
Hdac2
Fam163a
Egr3
Ltbp4
Nkpd1
Astn2
Hcn4
Col15a1
Usp12
Atg9b
Abcb8
Ptov1
Gpr88
Adra2c
Cirbp
Wasf2
Dynll1
Myh9
Mpv17l
Zfand1
Rpl22
Rnf207
Akap8l
Mtch1
Gm3383
Lingo2
Ppp1r26
Pou3f2
Stat3
Rab4b
Mia
Cebpd
Abcc8
Gdnf
Sgk3
Fam76a
Dnpep
Chn2
Pdzd2
Kcnj12
Cspg5
Psip1
Srbd1
Ptpn14
Hes3
Iffo2
Tfcp2
Rab31
Kcnk3
Nkx1-1
Rax
Acot3
Nlk
Grk6
Cep192
Gpr142
Alx4
Btbd17
Rpgrip1
Hnrnpc
Tom1
Olfm1
Pard3
Kcnk10
Cntn5
Fam174c
Zfyve21
Xrcc3
Adamts9
Zfp800
Efna2
Dact1
Slc26a4
Phyhipl
Atp10a
Rnf144a
Fam43a
Nes
Ap1b1
Nefh
Foxb1
Tuft1
Arsi
Slc16a14
Lingo3
Man2a1
Mme
Lamb1
Eya1
Wnt9b
Lsg1
Wiz
Trim45
Maneal
Dok7
Klf14
Rasal3
Cyp26a1
Sp1
Mtch2
Sorbs1
Tspear
Shisal1
Lmo1
D430041D05Rik
Dnajb1
Vamp2
Per1
Srpr
Foxred1
Lbr
Ebag9
Crhr2
Tfap2c
Bcl10
Megf6
Tprgl
Wnk2
6430628N08Rik
Piezo2
Foxf1
Gfra2
Sash1
Top2a
Hmox2
Nmral1
Ticrr
Nkx3-2
Rbm27
Endod1
Prmt8
Kcnn2
Ica1l
Syt12
Cck
Slc47a1
Msx3
Cd34
Rnf5
Agpat1
Ager
Prkg2
Svbp
Ermap
Map6d1
Gpr25
Ndst2
Sema4d
Prmt1
Atxn7l3
Lypd1
Alkal2
Grin2c
Fdxr
Kmt5a
Tmem51
Sema6d
Ift140
Cramp1l
Pdzrn4
Rpusd1
Mslnl
Paqr9
Fam76b
Cep57
Tpst2
Septin11
Tef
Slc4a11
Hcn2
Dync1h1
Tafa5
Ism1
Pou3f3
Sv2c
Amz2
Nucb2
Fem1a
Popdc3
Camk2n2
Rbms1
Klhl23
Ece2
Cnot1
Frmd4b
Pkd1
Tet2
St8sia2
Mtmr14
Mrpl21
Ighmbp2
Ggct
Lrif1
Clmn
Gpr155
Cd209a
Ss18
Nabp1
Cap1
Pkd1l3
Dhodh
Ivd
Sstr2
Adcy2
Pced1b
Amigo2
Bhlhe22
Lhx2
She
Myh10
Zbtb5
Polr1e
Sh3bp5
Mfhas1
Otp
Adamts8
Tle1
Msc
C2cd4d
Rorc
Dmrta1
Pdgfb
Myrip
Ppm1l
Eef2
Fbxo24
Lrch4
Dffb
Cep104
Pias4
Tfap2a
Cxxc5
Shroom3
Csmd1
Abcc9
Oxld1
Hgs
Ccdc137
Arl16
Tpmt
Kdm1b
Cdk5rap3
Tacstd2
Polr3h
Pwwp3a
Slc1a2
Cited1
Jakmip3
Gsx1
Pip4p1
Osgep
Apex1
Rab40c
Trim65
Mrpl38
Fzd5
Rmnd5a
Fzr1
Dohh
Slc35e2
Frat2
Dipk2a
Ryr3
Grm5
Il1rapl2
Cyp2u1
Pdxp
Qdpr
Clrn2
Ryr2
Fmnl1
Kcnc1
Bcl6
Fmnl3
Mboat2
Ntn1
Tom1l2
Drc3
Acvr2b
Slc35f2
Kcnc4
Adap1
Cenpu
Rab11b
Stk32c
Ccne1
Slc47a2
Wscd2
Ksr2
Rab5b
Pmel
Cdk2
Insig1
Gpc1
Camk2n1
Twist2
Tcf15
Rusc2
Cyld
Sqle
Ubr5
Rtn4r
Vgll2
Ppp1r16b
Arf2
Sfxn2
Arl3
Tmem260
G3bp2
Uso1
Natd1
Fgfr2
Col18a1
Cnpy1
Tmtc1
B4galnt3
Atp2b3
Nell2
Camta1
Usp20
BC005624
Katnb1
Gins2
Ctnnbip1