ChIP-Atlas: Target genes

Potential target genes for Sox9

Query protein: Sox9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1271842 | Embryonic limb
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Sox9's Target genes

◢ Sox9: Average

◢ SRX4554102: 3T3-L1

◢ SRX1271841: Atrioventicular canals

◢ SRX1035108: Chondrocytes

◢ DRX028800: Embryonic gonad

◢ DRX028798: Embryonic limb

◣ SRX1271842: Embryonic limb

◢ SRX1035119: Embryonic nose

◢ SRX1769357: Embryonic testis

◢ SRX1769358: Embryonic testis

◢ SRX450830: Epidermis

◢ SRX19952385: Gq-CNO

◢ SRX450826: Hair follicle stem cells

◢ SRX450828: Hair follicle stem cells

◢ SRX2208544: Intestinal stem cells

◢ SRX2208545: Intestinal stem cells

◢ SRX104231: Limbs and tails

◢ SRX15046886: MEF

◢ SRX15046887: MEF

◢ SRX4496821: mESC derived glial cells

◢ SRX4496822: mESC derived glial cells

◢ SRX4496823: mESC derived glial cells

◢ SRX130589: Neural tube

◢ DRX138318: Submandibular Gland

◢ SRX1023381: Unclassified

◢ SRX15441804: Unclassified

◢ SRX15441805: Unclassified

◢ SRX15441806: Unclassified

◢ SRX19952382: Unclassified

◢ SRX19952387: Unclassified

◢ SRX19952389: Unclassified

◢ Sox9: STRING

Greb1
Kpna1
Cldn34d
T2
Nkx2-6
Nepn
Gopc
Il31ra
Hexb
Phrf1
Mia2
Pknox1
E030030I06Rik
Dnmt1
Ptcd2
Mrps27
Txndc11
Prkdc
Mcm4
Rnf44
Cdhr2
Cd164
Ift27
Tjp3
Pip5k1c
Rita1
Ddx54
Sod2
Uchl1
Rab11fip4
1700029I15Rik
Mapk8ip1
Aldh9a1
Fbxw4
H2-DMa
Brd2
Muc3
Osbpl1a
Fam53c
Cdc25c
Rpl22
Rnf207
Asah1
Git2
Ankrd13a
Olfr806
Duxbl3
Duxbl2
Duxbl1
Taf15
Mmp28
Tarbp1
Tmem125
Abhd6
Tacc1
Bzw2
Ankmy2
Ccdc85c
Gipc1
Akirin1
Ptov1
Wasl
Fam227a
Cby1
Sash1
Dbp
Car11
Sec1
Tom1
Ptcd3
Polr1a
Ap2m1
Cnot6
Vmn2r102
Cdh12
Nphp4
Kcnab2
Mrps11
Mrpl46
Eif3b
Rarg
Oasl1
Paxip1
Gm525
Iqce
Brat1
Cdiptos
Cdipt
Cmc2
Cenpn
Gm7244
Tigd5
Eef1d
Prdm10
Prox2
Dlst
Cenpe
Mycbpap
Atg12
Ap3s1
Vangl2
Rpn2
Mroh8
Slc39a3
Rusc2
Aldh4a1
Trip10
Gpr108
Calm3
Septin11
Sspn
Dut
Them6
Slurp1
Psca
Atp6v0c
Amdhd2
Dot1l
Pramel32
Ifna13
Spata17
Gpatch2
Cln8
Madd
Por
Arntl
Sp2
Lyrm1
Dcun1d3
Rab5b
Pmel
Cdk2
Olfr855
Olfr854
Dpp9
Cox8c
Olfr1274
Pald1
Pfdn4
Fchsd2
Flcn
Diaph1
Tmem145
Prr19
Pafah1b3
Rab28
Cspp1
Cops5
Maml2
F830045P16Rik
Iqch
Aagab
Galnt10
Zfp949
Col6a6
Akt2
Prkci
Myh14
Uros
Bccip
Slc35e2
Sharpin
Maf1
Cyc1
Gm35339
Srbd1
Eed
Raly
Timeless
Mip
Zfp24
Tepsin
Ndufaf8
Zfp383
Zfp27
Acacb
Trpm4
Hrc
Rbbp6
Wdr45
Rfx1
Pcdh9
Rpl19
Cacnb1
Ak1
Atrnl1
Cd209a
Rsph3b
Apobec2
Tcp11
Kcnn4
Tmem267
Ptdss1
Mterf3
Rnasek
0610010K14Rik
Foxp2
Uchl3
Fbxo33
Zfp945
Celsr3
Prrt1
Ppt2
Sec23b
Rbbp9
Zfp526
Dedd2
Arhgef3
Fzr1
Dohh
Smim24
Gm48552
Sri
Hdac2
Inava
Was
Dnah7b
Arrdc4
Smim41
Atg101
Oxr1
Chmp3
Paip2b
Trir
Get3
Smarcal1
Smagp
Dgat2
Rlbp1
Fanci
Arid4a
Rps29
Lrr1
Ndufb1
Cpsf2
Caskin1
Pgp
Mlst8
Bricd5
G3bp1
Atox1
Gnb2
Ppp1r13l
Cd3eap
Dnm2
Taf6
Mblac1
Cnpy4
Zfp469
Hyal2
Hyal1
Tusc2
Abhd2
Gzmm
Prmt1
Bsg
Col9a1
Hap1
Ttf1
Cfap77
Sp1
Frat1
Hdac1
Abtb2
Mat2a
Fgfrl1
Srxn1
Tmem129
Tacc3
Slbp
Cnot1
Tsc22d1
Wwox
Polg
Arl2
Tmem260
Hmox2
Nmral1
Mbnl2
Traf2
Amotl2
Nfe2
Zfp748
Dchs2
Gm10710
Phldb1
Gm5458
Frat2
Ly6g6f
Abhd16a
Csf2ra
Sema3b
Kctd2
Atp5h
Cwc27
Stx16
Frmd4a
Fgd4
Wasf1
Cdc40
Uqcrq
Leap2
Gdf9
Shc1
Flad1
Cks1b
Lenep
Tbc1d17
Pnkp
Akt1s1
Sstr3
C1qtnf6
Dab1
Trappc3
Map7d1
Pkia
Atg16l2
Rpl7l1
2310039H08Rik
Ptcra
Atp8a1
Tpbg
Apela
Uqcrh
Lrrc41
Tada3
Arpc4
Ppm1l
Zfp143
Arid3c
Sigmar1
Papss2
Ska2
Prr11
Bsdc1
Sox8
Gzmk
Shc4
Lmf1
Ankar
Vmn2r4
Mtmr14
Cenpp
Adcy5
Ndst2
Tardbp
Lrpprc
Kdm6b
Bzw1
Hexim1
Fzd2
Ablim1
Prkag2
Fbh1
Ankrd16
Mrpl21
Ighmbp2
Smg8
Uba1
Utp18
Mbtd1
Rnf130
BC005537
Limch1
Cpa5
Tst
Mpst
Ets2
Tmem102
Fgf11
Chrnb1
Myl12a
Tcp11l2
Ier2
Cerk
Bhlhe40
Osbp
Dffb
Cep104
Pkmyt1
Syn1
Paqr4
Abr
Sox5
Pik3r3
Eef2
Dapk3
Cnot3
Baz2a
Atp5b
Colgalt2
Vgll4
Stt3a
Zbtb4
Slc35g3
Polr2a
Wasf2
Cdc42ep4
Eif2ak3
Zdhhc5
Selenow
Slc44a3
Cacna1g
Cttnbp2nl
4930564D02Rik
Elmo2
Ogfod1
Nudt21
Nemf
Rassf7
Lmntd2
Extl1
Plekhf2
Rtkn
Angel1
Dab2ip
Ptk7
Psip1
Lsg1
Dcps
Nfatc2ip
Id2
Ubald1
Mgrn1
Ttll7
Frmd6
Cbr3
Znhit1
Plod3
Aadacl2fm1
Chchd2
Zbed5
Ppp6r3
Ell3
Wdr72
Sema4d
Cic
Top2a
Ankrd54
Mrc2
Adpgk
Sorbs2
Mylip
Tle3
Setd4
Cbr1
Aaas
Rsph3a
Mocs3
Dpm1
Ube2b
Cdkl3
Pip4k2b
Sec14l1
Zbtb18
Selenop
Cdt1
Aprt
Proser1
Nhlrc3
Slc35e3
Rara
Fus
Cct5
Atpsckmt
Ngdn
Rmnd5a
Gm17660
Ltbp4
Cemip2
Zfp574
Grik5
Spire1
Pcdh20
Zfp637
Rpl23a
Rgs8
Rab34
Proca1
Tnrc6b
Smim38
Lep
Ap3m2
Zfp691
Opa3
Noct
Ephb2
Cobll1
Slc4a2
Cdk5
Cul2
Rbfox2
Ror2
Calml3
Atp5g1
Rptor
Ncbp2
0610012G03Rik
Kxd1
Fkbp8
Cyp2u1
Sphk1
Wipf1
Rtkn2
Trim50
Fkbp6
Rhobtb3
Col9a3
Ogfr
Rab4b
Mia
Wrap53
Trp53
Rcc2
Irf2bp2
Junb
Prdx2
Rnaseh2a
Crybg1
Myl12b
Robo1
Tmem198b
Dnajc14
Prickle1
Ncaph
Itpripl1
Tuba1b
Fdft1
Ube2a
C330007P06Rik
Ndufs7
Otogl
9430038I01Rik
Inpp4a
Lrrc75b
Ggt1
Wdr62
Gsdma2
Arvcf
Sort1
Unc13c
Clip3
Chrm1
Tom1l2
Drc3
Atf7
Mgll
Phldb2
Gpsm2
Nfib
Ppdpf
Smc3
Camta1
Pabpn1
Cer1
Cdhr4
Inka1
Uba7
Stip1
Nudt2
Kif24
Rai1
Bscl2
Gng3
Zfyve21
Xrcc3
Ss18
Rpgrip1
Hnrnpc
Arsi
Smg9
Nfatc1
Lars
Glrx5
Mknk1
Ss18l1
Psma7
Fos
Nf2
Zmat2
Pnmal2
9230019H11Rik
Gpr15
Cldnd1
Plpp2
Rnf5
Agpat1
Ager
Zfp654
Cggbp1
Kif1b
Asxl3
St3gal4
Adgra2
Cntn1
Sparcl1
Swsap1
Epor
Rab11b
Tnrc18
Syt8
Scx
Tbx15
Zfp219
Tmem253
Ung
Alkbh2
Tex14
Magi1
Sv2b
Klhl21
Malt1
C1d
Crebrf
Tmem242
Hal
Pitpnm1
Cdk2ap2
Plekhn1
Klhl17
Ivd
Irf2bp1
Mypop
Npas4
Phf13
Dok4
Efna4
Rhbdd3
Ewsr1
Ss18l2
Nktr
Sec22c
Fbxo24
Lrch4
Fbp2
Bcl9
Syce1l
Mon1b
Dcaf7
Mtss1
Me1
Wrnip1
Tspan8
Oat
Ccdc106
Med25
Fuz
Zfp580
Ankfn1
Slc25a25
Naif1
Arap1
Phc2
Tns2
Smim17
Nlk
Sympk
Evi5l
Marcksl1
1700034J05Rik
Akap8l
Rcl1
Dhrs3
Ankhd1
Gfra1
Rab8a
Map3k3
Cnot2
Prpf40a
Arl6ip6
Syvn1
Ppfia3
Lin7b
Bcl6
Fyn
Mapre3
Ypel4
Clp1
Scamp2
Prkaa1
Ccdc33
Abhd18
1700034I23Rik
Tedc1
Mrpl44
Crip1
Got1
Tmed9
B4galt7
Wdr70
Pcx
Prelid3b
Atp5e
Maneal
Trub2
Dok7
Pde6d
Cops7b
Dcdc2a
Pmvk
Bcl9l
Zfp687
Etv5
Mis12
Derl2
Nectin3
Tomm40
Eif3h
Hook2
S1pr2
Rhoj
Slc25a41
Khsrp
Dap3
Kpnb1
Hnrnpl
Rgmb
Tnnc2
Ube2c
Pisd
Sin3a
Snai1
Enah
Nol6
Gatad2a
Fbxw7
Copz1
Mdm2
Cdca8
9930104L06Rik
Mrpl1
Sel1l
Rplp0
Gcn1
Znhit3
Gripap1
Spag8
Hint2
Tpcn1
Iqcd
Pdk2
Zfp180
Ndufs4
Zfp101
Pcid2
Cul4a
Dhx30
Klf15
Hmgcll1
Igsf9b
Rgs10
Vdr
Rflna
Ugdh
Veph1
Cxcl11
Kras
Creb3l2
Agpat4
Psma8
Erg
Mapk6
Spag7
2900026A02Rik
Tcf12
Anp32e
Pygo2
Pbxip1
Nek6
Erp27
Kctd14
Scamp1
Ift140
Cramp1l
4930558K02Rik
Tle2
Arhgef40
Nynrin
Ccser2
Dync1h1
Mtss2
Arhgef1
Mvk
Mmab
Get4
Prkaca
Meis1
Kdsr
Tbcb
Polr2i
Ovol3
Ets1
Tmx2
Nap1l4
Med19
Col9a2
Selenoh
Il25
Efs
Cmtm5
Tmem160
Sox6
Lzts2
Slc46a3
Pacs2
Frmd5
Magel2
Katnb1
Per2
Plod2
Fam110a
Kcnk2
Gjb2
Snx22
Trim47
Cpt1c
Myh10
Rab40c
Trappc6b
Pnn
Taf12
Gmeb1
Id3
Ncald
Tspan4
Polr2l
Cd151
Fbxl14
Smtn
Cdca7l
Tmem218
Mrpl30
Mitd1
Zswim4
Opa1
Med23
Cap1
Lsr
Fam187b
Ggct
Psd
Fbxl15
Ptpre
Bcas3
Chadl
Tfcp2
Timm17b
Pqbp1
Calcoco1
Cuedc2
Agrn
Wfikkn2
Vps50
Tox2
Hepacam2
Tgfb3
Ift43
Pgd
Dcbld1
Olfml1
Kmt5c
Ttc41
Hsp90b1
Kansl2
Gfpt1
Pan2
Il23a
Erf
Gli3
Rgs3
Stat5b
Lekr1
Lancl2
Arid1a
Dynll1
Lbh
Cdo1
Mfsd8
Cnn3
Nup93
Ttc30b
Cuedc1
Cpa1
Cabcoco1
Leprot
Matn3
Col16a1
Zfp869
Nt5c2
Prxl2b
Zfpl1
Vps51
Tmem262
Cdca5
Gm51425
Nup133
Tm7sf2
Ubl5
Pin1
Fbxl12
3110082I17Rik
Zfp513
Snx17
Eif2b4
Yipf2
Timm29
Med4
Ufsp2
1700029J07Rik
Tctn2
Zswim3
Acot8
Gins2
Chmp6
Drg2
Phb
Tmem198
Chpf
Slc2a1
Ddx19b
Aars
Pwwp2a
Syne1
Otub2
Plxna3
Asrgl1
Lipe
Pabpc1l
Tspan33
Plin1
1700029P11Rik
Tigit
Gm5165
Ssrp1
P2rx3
Eapp
Ensa
Vps25
Wnk4
Pias4
Olfml2a
Nr6a1
Kat6b
Dhx35
Fmnl2
Art4
Gm51598
Bbx
Cyp26b1
Phf12
Dcaf11
Tnni2
Tjp2
Sptlc2
Actg1
Fscn2
Col2a1
D16Ertd472e
Enpp2
Qrich1
Qars
Tcerg1
Hbp1
Ap2a1
Rnf38
Eif5
Cyth2
Mfap3l
Srp68
Galr2
Elf1
Lima1
Ddx1
Kdm2b
Wfdc21
Tomm22
Phka2
D630003M21Rik
Amhr2
Tdrp
Sdsl
Sds
Pde3a
Mlec
BC107364
Pcdh1
Tomm70a
Cyth1
Srpk2
Tac1
Pradc1
Cct7
Ccn1
Uvssa
4930447A16Rik
Ift81
Fkbp3
Fancm
Palb2
Dctn5