ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104410 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◣ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Zfpm1
Klhl36
Slc44a2
Angel1
Tsga10
Mfge8
Mfap3l
Tnfaip8
Map2k4
Nkd1
Tbc1d16
Ccdc40
Pcgf5
Dok4
Fam214b
Zdhhc20
Plxnd1
Dennd4c
Abtb1
Psen2
Marf1
Xylt2
Spata2l
Cpm
Acer3
Nrbp2
Gm2a
2310022B05Rik
Txndc5
Acsl1
Cers5
Tpmt
Kdm1b
Ccsap
Pknox1
B4galt5
Lrrfip1
Trrap
Znrf3
Rassf4
Dlc1
Fzr1
Slc19a2
Gdpgp1
Cib1
Cadm4
Tspan17
Tbc1d14
Sesn1
Cep57l1
Cmtm4
Tmem123
Pole4
Pdp1
Dynlt1b
Anapc4
Kazn
Larp1b
Plag1
Chchd7
Homer3
Rad51ap2
Usp12
Sp1
Adpgk
Cdc42se2
Sema3f
G3bp2
Uso1
Ccdc9
Garem1
Esd
Pip4k2b
Phf23
Mapk8
Tspan14
Acadm
Spsb1
Prpf40b
Prodh
Arfgap3
Atox1
Tmtc2
Slc8a2
Usp3
Xpr1
Snx8
Nxn
Rab22a
Ell
Gatad2a
Smurf1
Slc8b1
Degs1
Cbwd1
Vps26a
Pak1
Eef2kmt
Trappc2l
Galns
Pwwp3a
Asap3
Eif2ak4
Id3
Tpst2
Orai1
Spryd7
Micall2
Slc12a4
Iffo2
Bcam
Dynlt1f
Dynlt1c
Bicdl1
Ccdc112
Csgalnact2
Xpc
Lsm3
Rell1
Vav2
Pitx3
Lss
Raly
Dusp11
Afg3l2
Pex10
5031439G07Rik
Nmt2
Nfe2l2
Tnip2
Ldlrap1
Napepld
Ctnnbip1
Arhgef3
Saraf
Snx22
Add3
Jund
Zc3h12a
Mesd
Acads
Gxylt1
Clic4
Zbtb2
Hpcal1
Pdk1
Arrdc1
Fbxo43
Vgll4
Qsox1
Hs6st1
Litaf
Aacs
Cpt2
Dera
Gpr155
Klf16
Rhpn2
Pim1
Ogfod3
Hexdc
Glrx3
Garnl3
Ripk2
Lamc1
Slc25a15
Sh2b3
Kctd6
Gpr157
Ppp2r5c
Ntmt1
Mios
Hebp1
Cmip
Spire2
Ctdsp2
Fam210b
Pofut2
Dop1b
Anxa11
Slc2a13
Sgtb
Nln
Zbtb37
Fah
Myo6
Lnpep
Tmem158
Chmp5
Bag1
Ing5
Fnbp1
Glt28d2
Tram2
Plcd3
Acbd4
Tmem64
Slc29a4
Gcnt1
Twsg1
Chaf1b
Trim21
Crocc
Dars
Dnpep
Gins2
Pkd1
Zhx1
Sp4
Yars
S100pbp
Pgbd5
Inpp5a
Nepro
Zfp28
Wipi1
Ankrd50
Fgfr3
Vkorc1l1
Otud1
Oasl1
Mtrf1l
Prex1
Slc38a10
Prpsap2
Atl2
Tbc1d2
Frmd6
Sertad2
Rbbp6
Helb
Tmem169
Pecr
Ctnnal1
Frat2
Tmem221
Rab39
Fbxl21
Brpf1
Gja3
Rab3d
Abcb9
Dipk2a
Urb1
Plekho2
Pias1
Trp53bp2
Atp1b3
Ern1
Nrtn
Fez2
Slc22a5
Snx21
Tmub2
Paqr3
Avpi1
Slc29a3
Impa2
Gk5
Slc4a11
Dynlt1a
Prdx3
Sdc1
Crmp1
Trappc4
Rps25
Bcap31
Abcd1
Llgl2
Ascc2
Adap2
Cep70
Plcd1
Nup107
Opn3
Traf5
Scarb1
Tmem87b
Rbis
Papolg
Mindy2
Sarm1
Agpat2
Hspa2
Usp28
Syn2
Scn8a
Megf6
Rab43
Mast3
Rab11fip1
Plrg1
Osbp2
Anxa5
1810062G17Rik
Fancc
Ywhab
Ahsa2
Ing2
Cep55
Mex3d
Snx25
Bhlha15
Zfp746
Mapk9
Wdr20
H6pd
Tarsl2
Shcbp1l
Celf6
Mnd1
Grsf1
Cyb5r1
Nadk
Shank3
Casp9
Lims1
Slc22a21
Lonp1
Catsperd
Nt5dc3
Actr5
1110008P14Rik
Fam76a
Gpc5
Avl9
Cmtm6
Blvrb
Fam219a
Dnaic1
Ipo5
Sdhc
Mpz
Notch1
Limk1
Ppp2r3a
Golga5
Setmar
Brd3os
Inpp4a
Bri3
Cyld
Csnk1g2
Dhdds
Mboat2
Ola1
Tppp
Pter
Manea
Dnm3
Baiap2l1
Rrbp1
Ssh3
Rassf3
Tmem267
Rc3h1
Sh3bp4
Spata13
Pou3f1
Pnpla3
Cpne3
Gng12
Dhx35
Syt14
Tec
Xpnpep1
Mgst3
Ldlrad3
Ccdc85c
Edem1
Tmem41a
Btbd2
Sugct
Mplkip
Tom1
Akap7
Cactin
Zfand1
Gdpd5
Cox19
Plekhg5
Nod2
Ndrg2
Gpbp1
Pqlc3
Kremen1
Ube2g1
Habp4
Tmem220
Stx1a
Ep400
Tmed6
Rrm2b
Plk3
Drap1
AI837181
Txnrd3
Clybl
Zfp78
Acer2
Mfsd14a
Mpc2
Dcaf6
Hk1
Acy1
Slco4a1
Ogfrl1
Eepd1
Adss
Erc1
Hmox2
Itprid2
Hps6
Inpp5f
Sntg2
Ptprn2
Man1c1
Gpc3
Sergef
Aip
Tmem134
Foxn2
Zfp983
Ralgapa2
Shmt1
Mphosph10
Mcee
Sqle
Ak7
Znfx1
Axin1
Pcyox1
Amz2
Rxylt1
Abhd18
Nup93
Spa17
Siae
Scyl2
Nectin2
Rabep2
Lin7b
Adh5
Pard6g
Gdf6
Lrig1
Sec23a
Phf10
Col5a1
Fiz1
Tbl2
Zfp524
Nudt7
Optn
Rps29
Ubr3
Setx
Pgpep1
Pbx2
Ppargc1b
Nkx6-1
Rras
Epb41l2
Zfp664
Ccdc92
Isyna1
Eps15l1
Cdc34
Sipa1
Camsap1
Pygo2
Ebag9
Fbxo31
Mbd2
Saysd1
Med16
Mcm9
Tmem132c
Eda
Vcl
Pxn
Slain2
Micu1
Cers4
Gigyf2
Tmem50b
Klc3
Usp7
Strada
Atp7b
Alg11
Prkar1b
Dnaaf5
Nova2
Eea1
Rock1
Pop7
Capzb
Agps
Med26
Ankrd10
Trappc9
Clcn3
Brf1
Lonrf1
Heatr1
Zfp53
Fbxo5
Ulk1
Senp8
Myo9a
Trnau1ap
Ppfibp1
Zfp318
Gng8
Ppfia4
Rnft1
Pbld2
Hnrnph3
Sox12
Rex1bd
Kif17
Brat1
Smg1
Pcgf3
Mzt1
Snap29
Pi4ka
Rpl31
Tmem192
Uqcrq
Ap3m1
Adk
Stim2
Rnf2
Nabp1
Txn1
Fosl2
Fbxl15
Sowahc
Septin10
Orai3
Myo10
Wrn
Purg
Tmem240
Zdhhc2
Arhgef17
Tgif2
Rap1gap
Fhod3
Fbxo11
Mertk
Tmem59
Tceanc2
Hspg2
Ikzf5
Acadsb
Hddc2
Nbeal1
Ninj1
Limk2
Tmem126b
Slc37a4
Gcc1
Atp23
Tmem177
E2f1
Ap3d1
Rhbdf2
Gls2
Scpep1
Acot7
Osbpl9
Nt5c3
9430038I01Rik
Lrpap1
Nphp3
Rnaset2b
Rnaset2a
Hic2
Fbrsl1
Lsm11
Ncapg
Trim3
Smim20
Mtch2
Kdm2b
Tfam
Polr1d
Lnx2
Klhl26
Usp20
Dio3
BC005624
Birc6
Ppp1cb
Klf11
Pias3
Pawr
Usp45
Dusp3
Zfp516
Rffl
Ppp1r21
Jph1
A930018P22Rik
Tbc1d23
Carm1
Sh3bp2
Rassf8
Ppie
C1ql1
Ahcyl1
Ankrd24
Skap2
Clcn2
Castor1
Xkr8
Sart3
Iscu
Dnaja2
Prxl2c
Prrc1
Spcs3
Stom
Prkra
Lmf1
Foxi3
Myh9
Cap1
Adipor2
Tpi1
Abhd17a
Bcl9
Mxi1
Ttc38
Brwd1
Nampt
Stk3
Ptpn4
Caprin2
Coro1b
Psmc6
Serinc5
Trip10
Slc4a8
Il17d
Idua
Dgkq
Cgn
Por
Eml4
Atg14
Pcid2
Cul4a
Bpnt2
Arhgap29
Crim1
Smox
Cyhr1
Pacs1
Kifc2
Wnk2
Slc25a40
Mapk13
Lzts3
Exosc9
Dbf4
Alg6
Bach1
Mtx1
Magi3
Polr1e
Slc19a1
Trp53i13
Kcnq3
Cdkn2d
Arhgef19
Aco1
Map2k2
Cdkn2aip
Sumo3
Myadm
Irx2
Slc41a3
Hlf
Tex14
Eloa
Stk32c
Lrrc27
Rad51c
Usp33
Rspry1
Psme3ip1
Dsel
Neu3
Hcn2
Gamt
Mob3a
Izumo4
Gtdc1
St3gal1
Lrrc63
Lcp1
1700025G04Rik
Mlf2
Sipa1l2
Cul7
Rnf31
Psme2
Arrb2
Slc25a1
Zfp868
Psmd12
9130023H24Rik
Abhd17c
Nfkbie
Hspa12a
Zfr2
Prr5
Fzd9
Ell3
Pdlim5
Bag3
Inpp5k
Pdcl
Inafm1
Ctbs
Rmi2
Tmem86a
Tob2
Fbxl3
Phc2
Pa2g4
Ost4
Ndrg1
Cbl
Slc39a6
Elp2
Cdk4
Ginm1
Srd5a1
Nsun2
Trim62
Aprt
Marchf2
Srebf2
Sypl
Yif1b
Kif1c
Inca1
Tspan15
Mybl2
Fbxo21
Ppp1ccb
Ppp1cc
Ppp2r1b
Atp8b3
Nhej1
Ncapg2
Ccdc62
Snx1
Smim7
Fam120a
Btbd7
Atr
1700065D16Rik
Cbfa2t2
Xylt1
Raver2
Epb41l5
Ccnh
H1f4
H2bc6
Nckap5l
Trak2
LOC114841036
Fkbp2
Pgm2
Rapgef6
Asb1
Coa7
Zbtb7b
Pygl
Lrrc42
Hspb11
Efr3b
Cd164l2
Mafk
Micu2
Tent4b
Osbpl1a
Dock6
P2ry2
Mknk1
Gm12500
Ampd2
Wwtr1
Sbk2
Pmm1
Wdr17
Klf3
Polr2d
Arhgap17
Relb
Tm2d2
Adam9
Lap3
Prkcd
Gpbp1l1
Acvr2b
Slc12a7
Tpt1
Atg10
Rbpms
Scaf4
Stard9
Map3k14
Specc1
Dennd4a
Stard5
Ppif
Rbfa
Tle6
Rab11fip5
Khnyn
Cbln3
Abcc4
Sh2d3c
Nbeal2
Nub1
Zfp639
Tbc1d17
Akt1s1
Slc23a2
Usp43
Tspan9
Svip
1700030J22Rik
Sf1
Anxa7
Srpk1
Pcbp3
Fam221a
Fzd10
Etnk2
Ccne1
Polk
Cert1
Aph1b
Cyth1
Lipt2
Epn2
Cyp46a1
Cdh15
Fth1
Mlxip
Orc4
Mbd5
Iqgap1
Fkbp3
Mtch1
Eif1ax
Tmcc1
Lars2
Gm10509
Fsip1
Arid4b
Mtmr10
Gpatch8
Psmg1
Rasa2
Marchf3
Mphosph6
Abhd12
Cd59a
Aunip
Slc6a3
Anapc10
Abce1
Vps4a
Zfp507
Ralgds
Chid1
Smarcd2
Tmeff1
Primpol
Casp3
Hsbp1
Wdr91
Scube1
Efna3
Wwc2
Scyl1
Trerf1
Ndufb6
Slc25a30
Zfp667
Palld
Cyrib
Kiz
Myo1d
Dennd2c
Tead3
Slc27a1
Igsf3
Cln8
Hmgn2
Rnf149
Rnf38
Mtmr12
Hjurp
A730008H23Rik
Kank2
Impdh1
Nipsnap3b
Creb3l2
Dennd3
Zranb1
Mxra7
Cdk20
Sgcb
Rhoq
Flt4
C2cd4c
B4galnt3
Snrpd3
Gucd1
Pik3cb
Pcnx4
Hspbp1
Ilrun
Gabbr1
Acvr1b
Paox
Map4k2
Ucp2
Fnip2
Elmo3
Dnajc21
Arl5a
Ppp3ca
Cln6
Jcad
Dgkd
Fgd4
Rb1
Fbxo44
Fbxo2
Erich2
Mettl8
Dcaf17
Cyth3
Megf9
Ttc7
Npc2
Isca2
Slc17a5
Stn1
Git1
Polm
Fam177a2
Fam177a
Pbx1
Vps37c
Atxn7l3
Snx6
Phldb3
Kcnh4
Hid1
Qrich1
Eif4ebp2
Pus7
Arhgap12
Gnpnat1
Gpr146
Sfi1
Paqr8
Dtd2
Serpini1
Pdcd10
Socs6
Mad2l1
Adam19
Fam241a
Vegfa
Pus7l
Irak4
Mfn1
Esyt2
Morc3
Pcmtd1
Ifngr1
Dazap2
Esrra
B3gnt4
Smarcc1
Zcwpw1
Mepce