ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9144814 | 3T3-L1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◣ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Polr2a
H4f16
Cxcl1
H3f3b
Cwc22
H4c18
H3c14
H3c15
H2ac19
H2ac18
H4c3
Slc35e3
Yeats4
H1f2
H4c14
Tob1
H2bc18
H3c13
Eif1
H4c17
Ftl1
H4c4
Eif4a2
Cxcl5
Tuba1a
Mt1
Tsc22d1
Arf6
Nfkbia
Sp1
Kmt5b
Unk
H4c8
Hmgb2
H1f4
H2bc6
H1f3
Sned1
Pnrc1
Angptl4
Mat2a
Adamts1
Clec2d
Txnip
Smim10l1
Nup62
Il4i1b
Atf5
Col1a1
Atf4
Zfp36l1
Zfp36l2
Sqstm1
Mdm2
Fam43a
Fth1
B2m
Uspl1
Slc5a3
Mrps6
Arrdc2
Ints6
Jund
H3c11
Tuba1b
Hmgn2
Ppp1r10
Mrps18b
Cebpd
H4c9
Efcab2
Mmp2
Letm2
Pcbp1
Ddit4
H2bc21
H2ac21
H2ac20
Klf7
Eef1a1
Junb
Poldip3
Ubc
Gm3448
Gm3417
Tcte3
Ermard
Slc25a4
Selenop
Resf1
Srsf3
Ulk2
Brpf3
Cited2
Ptms
Ppp1r12a
Vim
Btg1
Irf1
Hnrnpu
Son
Gart
Actb
Klhl24
Slc39a10
H3c6
Pnp
Cebpb
Epc1
Napepld
Ddx5
Cep95
Rpl3
Taf4
H1f0
Cdkn1a
Ddah2
Rrp36
Uhmk1
Pdf
Tmsb10
Ppia
Cdk12
Hexim2
Sec62
Ddx3x
Ccng2
H4c2
Slc38a2
H3c4
Csrnp2
Gm13285
Gm13290
Gm13289
Srsf6
Pcif1
Rap1b
Cox20
Urgcp
Wsb1
Sp3
Zfp1
Dip2b
Fbxl3
Phlda3
Ctnnb1
Marf1
Fus
Sik1
Prdx1
Col1a2
Nrf1
Ubb
Fam53c
Calm1
Hnrnph1
Zfp866
Rnf103
Zfp963
Zfp655
Dennd6a
Hnrnpa2b1
Cbx3
Tmem179b
Eif4g2
Odc1
Serinc3
Timp2
Gfpt1
Cpsf6
Rhou
Nfat5
9530077C05Rik
Anln
Amdhd2
Hmgn1
Amacr
Gadd45a
Sun2
Gadd45gip1
Zfp207
Eif3a
Dynll1
Gm13287
Gadd45b
Cplane1
Ccl7
Ankrd37
Ddx17
Slc5a6
Atraid
H2ax
Mylip
Slc43a2
Hsp90aa1
Kntc1
Rfc4
Bach1
Sdc4
Hexim1
Gpr19
Ier5l
Mob1a
Srsf2
Mfsd11
Pdss2
Atp5g3
Frs2
Mmadhc
Atg10
Raly
Calm2
Nfyc
Rgl2
Ep300
Zfp41
Hif1a
Ahnak
Zfp236
Gm13279
Gm13278
Mgst1
Crebrf
Tmem65
Ywhae
Glg1
Rbm39
Ubn2
Trp53inp1
Rnpc3
Ppm1a
Fam162a
Ccdc58
Dyrk1b
Rplp0
Wbp4
Elf1
Npm1
Rmi1
Hnrnpk
Acyp2
Tnks2
Mrpl53
Gab1
Zfp143
Cltc
Gpx1
Tmem183a
Atf1
Eapp
Zfand5
Gm13288
Litaf
Gm13276
Nckap5l
Zfp868
Rgs2
Tbc1d13
Plpp3
Eci1
Fnta
Chrac1
Rasl11b
Zfp869
Rsrp1
Nt5c2
Itfg2
Znfx1
Morf4l1
Wwp2
Vamp8
Ctsl
Rfx3
Camk1
Zfp740
Pkn1
Csad
Sik2
Ccng1
Kctd20
Rab5a
Zfp248
Relb
Itm2b
Khk
Hsp90ab1
Gm13277
Mcur1
Mak16
Tbrg1
Ier3
Brwd1
Msantd2
Wdr19
Khsrp
Gmeb2
Pcmtd1
Agbl3
Tasor
Csnk2a1
Pcyox1
Hipk3
Cdkn2aip
Herpud1
Ccl2
Sppl2a
Marchf7
Kansl1
Vamp2
Gtpbp6
Atp6v0c
Nabp1
Arhgap12
Samd9l
Tm9sf3
Lrrc58
Supt3
Cap1
Acin1
1700123O20Rik
Lyplal1
Plk2
Slc3a2
Phf10
Cirbp
Amn1
Retsat
Elmod3
Arl2bp
Ttc7
Lrrc61
Aga
H3c2
Mtif2
Hmox1
Calr
Ndufb8
Rock2
Clk1
Gpr85
Lbh
Cct2
Gnas
Dusp10
1700056E22Rik
Sgo1
Pdcd4
Nr3c2
Csf1
Ccdc91
Mknk2
Gstp1
Sugp1
Mau2
Tnrc6c
Socs1
Arpc1b
Zfp319
Usb1
Psap
Patj
Sspn
Cul5
Fbxo15
Timm21
Ptpn2
Wnk1
Adnp2
Map2k7
Cpeb2
H2-K1
Sec61a2
Fn1
Klf6
Tpk1
Zfp397
Vdac3
Slc35b2
Zbed3
Hnrnpdl
Fscn1
Nup107
Dhrs7
Brd1
Klhdc1
Praf2
Inafm1
Ptma
Gng12
Btg2
Siah1a
Nop2
Dnajb4
Fubp1
Pabpc1
Gas1
Rtn4
Wtap
Timmdc1
Ephb4
Rcn2
Cat
Maf
Mt2
Raf1
Rab1a
Ilkap
Chd4
Spr
Glul
Atp2a2
Ppp1ccb
Ppp1cc
Taok1
Znrf1
Cutc
Cox15
Sox4
Gna12
BC005537
Tmf1
Mphosph9
2810006K23Rik
Wwc2
Tmem87a
Ganc
Pim3
Pigl
Ncor1
Sft2d3
Prkag1
Zfp68
Dgcr6
Stat3
Dynll2
Sf3b4
Trim28
Snai1
Cul3
Arf5
Gtf2a1
Kdm3b
Cul7
Cpne2
Gtf2b
Tmem168
Prrc2a
Pan3
Poglut1
Slc18a1
Atp6v1b2
Rprd2
Rybp
Bri3
Zfyve16
Map2k2
Ube2l3
Senp5
Ppdpf
Ralbp1
F3
Sptan1
Ndfip1
Lrp6
Otub1
Epc2
Ppp1r3c
Pck2
Tmem199
Poldip2
Txndc15
Tmem209
Ssmem1
Cd63
Pdcl
Rhob
Tcf25
Oxsm
Ngly1
Nuak1
Klhdc2
Scamp3
Ttk
Lmna
Adprh
Plec
Lgals1
Gxylt2
Tra2a
Socs3
Ppp2r3a
Cdkn2b
Cyth2
Rnf14
Ube2b
Zc3h6
Gem
Ilf2
Dazap2
Tomt
Lamtor1
Tlk2
Prrc2b
Jpt1
Tax1bp1
C3
2700081O15Rik
Ppa2
Pkd1
Trmt44
Errfi1
D5Ertd579e
Nfkbiz
Kctd5
Ubxn1
Elk4
Micu3
2310009B15Rik
Dnaja1
Ppp1r2
Flcn
Tnfaip2
Zfp617
Rhog
Birc2
Smad1
Cd248
Pum3
Klf11
Zfp69
Lasp1
Mmp11
Chchd10
Vasn
Upf3a
Lig3
B3gnt9
H3c10
Kansl2
Hlcs
Tgfbr3
Plin4
Dyrk1a
Yeats2
Med28
Rnf19b
Polg2
Paip2
Fbxo6
Cblb
Itgb1
Sod1
Irs2
Bmt2
H2bc4
H2ac6
Klf2
Pkd2
Pura
Traf4
Pccb
Plcg1
Mcl1
Galk2
Cops2
Rfx1
Tusc3
Adamts5
Tmsb4x
Map1lc3b
Usp53
Hnrnpm
Rpl35a
Iqcg
Zfp384
Gbe1
Nr2c2
Uhrf2
Ttc17
Polb
Kansl1l
Ypel3
Palld
Gsto1
Ubald1
Aven
Gtdc1
Cdc42ep3
Dazap1
Nsmf
Srsf5
P4hb
Ndst2
Adck2
S100a10
Nfatc3
Rnf10
Pcmt1
Dlgap4
Chkb
Lats1
Fzd1
Necap1
Pot1a
Slc12a2
Ddx39b
Lrif1
Ulk1
Baiap2
Nrip1
Cstb
Tomm34
Pih1d1
Aldh16a1
Ctsb
Adnp
Ddx59
H3f3a
4833420G17Rik
Strn4
Fkrp
Il10rb
Fstl1
Ssbp1
Akap1
C330018D20Rik
Mmaa
Ube2v2
Ksr1
Thap1
Rtkn
Mphosph6
Cdc42
Atp5g2
Gm13275
Nrbp1
Sike1
Arhgdia
Ctdsp1
Rufy1
Cdkn1b
Vps54
Id1
Zbtb37
Arl15
Fmc1
Trmt10c
Zbtb44
Zfp821
Pole4
H2bc15
H2ac15
Pcf11
Nipsnap2
Gpr155
Troap
Tmem237
Zbtb11
Zcwpw1
Mepce
Dennd4b
Tef
Trmt1l
Swt1
Patz1
Kmt2e
Sub1
Yme1l1
Mastl
Nudt4
Lyz2
Tmem62
Ywhaz
Mef2a
Sdhaf2
Cpsf7
Atxn1l
Rpl26
Arrdc3
Scand1
Cnbd2
Thap7
Aff4
Dusp11
Ccni
2010109A12Rik
Dennd6b
Dync1li2
Retreg2
Cnppd1
Crot
Atp6v1g1
Per3
Bbs2
Ripor1
Akap8
Nfe2l2
Rab11b
Lox
St3gal2
Zmat1
Pick1
Rplp1
Zfp438
Pxdn
Tti2
Sde2
Rbm12
Cpne1
Zfp672
Rbm4b
Kpna2
Orc4
Mbd5
Maged1
Ccdc186
Npm3
H2bc13
H2ac13
Homer3
Fam227b
Dtwd1
Mtmr2
Yars2
Snrpb
Rasl11a
Mrtfb
Pdpk1
Snn
Zfp423
Boc
Selenot
Nsfl1c
Lemd2
Seh1l
Cers5
Bdnf
Lifr
Rnf122
Srbd1
Frmd6
E4f1
Ppp3cb
Cebpg
Drg1
Kbtbd3
Asb8
Smarcd1
Cdkn2a
Tmem170
Pink1
Kif13a
Csnk1a1
Grcc10
Haus1
Atp5a1
Usp40
Zfp11
Specc1l
Tnfsfm13
Tnfsf12
Clic1
Lnpep
Rbm14
Gm21992
Slc29a3
Usp32
Memo1
Slc25a15
Lrrk2
Pafah1b1
Col3a1
Dusp7
Zfp703
Txnl1
Caprin1
Dzip3
Cip2a
Kdm3a
Ggnbp2
Coq9
Ciapin1
Gnpat
2810004N23Rik
Tmem128
Pcgf3
Grsf1
Mppe1
Iqcc
Trib3
Fasn
Trir
Ankrd17
Rnf146
Osmr
Rc3h2
Slc9a1
Ccnt1
Zfp959
Nras
Dtwd2
Hp1bp3
Ei24
Alas1
Lyrm2
Ttc26
Fbxl5
Cdc42bpa
Tm2d1
Ptrhd1
Cenpo
Ubr5
Atxn7l3
Ypel5
Arl6
H2bc12
H2ac12
Ep400
Clk4
BC049762
Sema4c
Kiz
Zfp523
Gsk3b
Slc16a6
Arsg
Gpr137
Bad
Src
1810013L24Rik
Kat6a
Bcl7b
Aplp2
Ythdf3
Eif3d
Fam168b
Mfap3
Fam114a2
Camkk2
Tpt1
Parva
Luc7l2
Vps37a
Cnot7
Ddx6
Rcbtb2
Slc1a5
Smarcc2
Plekhm3
Usp24
Hoxd8
Vdac1
Ubr3
Kdm5b
Flywch1
Bptf
H4c11
Nagk
Usp38
Capza2
Arhgap35
Gabarap
Ube2q1
Cxcl12
Rbms1
Plscr4
Eif5
Rabl6
Nubp1
Ubr2
Myo5a
Rab34
Tbc1d20
Wdfy3
Nsun3
Lcor
Aaas
Pdlim7
Zc3h11a
Zbed6
Sbf2
Hilpda
Pja2
Atf2
Bsg
Osr2
Fads2
Rabif
C1galt1
Eef1g
Tfdp1
Aox1
Poglut3
Nfu1
Dhps
Rpl6
Rpf1
B4galt5
Elp5
Ctdnep1
Tubg1
Retreg3
Pcmtd2
Ldlrad3
Gm20346
Spats2
Sox9
Rtn3
Mettl9
Rbm6
Vps35
Kif20a
Brd8
Mkrn2
Smurf1
Erbin
Uap1l1
Cd2ap
Mthfsl
Mthfs
Sorbs3
Ap2m1
Golph3
Sp2
Mios
Plin2
Trpm7
Zbtb2
Tpst1
Mkrn1
Ephb3
Phf14
Hif1an
Zfp358
Zfp316
9030025P20Rik
Sf1
Creb1
Zfp62
Srd5a3
Tor1b
Hbp1
Baz2b
Rmdn2
Usp22
Shisa4
Marchf8
Btbd1
Rpap1
Txn1
Luc7l
S100a6
Oaz1
Irf2bp2
Dnajc10
Cdc16
Pik3r3
Smc5
Zbtb38
Zfp647
Hnrnpa1
Cbx5
Atp6v1h
Smim14
Spg11
Hnrnpa0
Mob1b
Ndufv2
Col5a1
Ddrgk1
Ak3
Ndufs7
Rpl41
Cul1
Zfp638
Utp3
Mtx1
Ghr
Med11
Thbs3
Slc35f5
Cenpa
Mta3
Zfp607a
Pcbp2
Bms1
Arglu1
Dynlt1b
Egln2
Glce
Ltbr
Gm13272
Orai3
Fbxo28
Pon2
Cbr3
H4c1
Gabpb2
Rpl17
Ccdc62