ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10562781 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◣ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Txndc11
Cldn34d
Cdv3
Ube2s
E030030I06Rik
Xylb
Slc6a16
Cd37
Bcl2a1a
Rsc1a1
Tmem181a
Tomm5
Hoxb13
Dennd2c
Cdk15
Cltc
Rbks
Babam2
Bbs1
Slc15a1
Tmem231
Gabarapl2
Gpx4
Enpp4
Mcl1
Cyp26a1
Cfap74
Xbp1
Crlf2
Palb2
Dctn5
Dedd
Mkrn1
Clcn4
Hivep3
Chchd5
Zc3h12a
Tal2
Fubp3
Plbd2
Cnn3
Notch4
Mafa
Slc29a1
Mymx
Fcgr3
Ints3
Gtf3a
Gm4981
Dux
Fitm2
Tet2
Gm3667
Mobp
Pdgfrb
Cdx1
Psmd3
Rad23a
Calr
Bcl2a1b
Adgra2
Tmem191c
Dusp9
Mtf2
Cic
Camk2n1
Cidea
Tcp11
Speer4e
Tmbim4
Irak3
Rpl22
Rnf207
Aqp3
Agbl5
Pmepa1
Brwd1
Atp6v0c
Amdhd2
Lasp1
Ccdc171
Exosc6
Dppa2
Ccdc120
Hspbp1
Brsk1
Tbl1xr1
Srp14
1700067K01Rik
Misp3
Rcor2
Snrpb2
Exoc2
Adcy5
Zfp827
S100g
Zfhx2
Thtpa
Elavl3
Vmn1r3
Vmn1r2
Ankrd28
Capns1
Pomt1
Kazn
Denr
Ncmap
Fbxo31
Sugp2
Armc6
Dcaf4
Vamp4
Bmerb1
Ifitm7
4921517D22Rik
C1qc
C1qa
2610042L04Rik
Oaz2
H2-Bl
Cox7a2l
Tmem125
Slc43a1
Frmpd1
Ubr4
Marcks
Il3ra
Snai1
Fcgr1
Imp4
Ccdc115
Angptl8
Dock6
Sspn
Smarca5
Gdf15
Rcn3
Prss16
Ndufs7
Lefty1
Zfp692
Spen
Hes7
Aloxe3
Cdsn
Bcl2a1d
Uqcr11
Mbd3
Ttpal
H2ap
H2al3
Guf1
Ppp2r2d
Exd1
Chp1
Mapk1ip1
Ctnna3
Chrna5
Gm3739
Wdtc1
Zfp740
Csad
Rplp2
Slc25a22
Pidd1
Arhgap19
Arrdc3
Pdcd5
Bcat2
Hsd17b14
Zdhhc18
Mpzl1
Trmt2a
Ranbp1
Pom121l2
Mok
Zfp839
Plcb4
Nanog
Shf
Hoxb4
Hoxb5
Fbxw4
Baz1b
Zbtb33
Itpk1
Tmem40
Themis2
Smyd2
Ppdpf
Resf1
Btn1a1
Tnfsfm13
Tnfsf12
Mdm4
Rusc1
Sepsecs
Efnb3
Ubxn2a
Atad2b
Psma3
Mtnr1a
Sec22c
Fam131c
Acp6
Trim7
Kmt5b
Mettl16
Mettl26
Wfikkn1
Mcrip2
Spred2
Ube2o
Fbxo44
Fbxo2
Fbxo6
Jam2
Atp6v0d1
Agrp
Rbsn
Ercc2
Ercc6l
Caln1
Ksr1
Cacng6
Phf5a
Aco2
Hgsnat
Ilf2
Npr1
Nkx2-6
Plxdc1
Arl5c
Ttk
Scn5a
Cyp2w1
Cox19
Klf1
Dnase2a
Septin11
Plcd3
Acbd4
Fam83a
Knl1
Lama5
Trim41
Slc39a4
Ptpdc1
Vps28
Rab11a
Efcc1
1810020O05Rik
Sfi1
Eif4enif1
Abcc10
Ttc24
Iqgap3
Zfp184
Tfrc
Tspan9
Itga3
Dph2
B4galt2
Atp6v0b
Cd209a
Nkap
Kmt2a
Letmd1
Cenpm
Scarf1
Rilp
Dpp4
Plekhb1
Nemf
Septin1
Tbc1d10b
Mylpf
Aurkb
Smyd4
Rpa1
Prx
Gm2237
Smarcc2
Pomgnt2
Hrob
Rxfp4
Lamp1
Vps13d
Kif2c
Nphs1
Kirrel2
Ttc25
H2bc12
H2ac12
Nodal
Oxnad1
Dph3
Rhobtb1
A930033H14Rik
Mreg
Btbd16
Tcirg1
Ndufs8
Thrsp
Vars
D17H6S56E-5
Agpat5
Xpo1
Nsd1
Odc1
Pibf1
Dis3
Ubqln5
Gins3
Kat7
Tia1
Pcyox1
Polg
S1pr2
Steap3
Disp3
Ltbp4
Tmem107
Borcs6
Arl4d
Rreb1
H4c8
Camk1
Zfp982
Kcnk5
Gm36210
Gm51573
Rps29
Lrr1
Foxp1
Smyd1
Krcc1
Ccdc92b
Ghdc
Hcrt
Cfap126
H3c10
H2bc13
H2ac13
Olfr1359
Cdkn2d
Gm973
Best3
H3c8
H2ac10
4930524B15Rik
Rai1
Hoxa1
Sit1
Ccdc107
Zfp991
Zfp978
Mrps15
Gm13290
Gm13289
Gm13285
Gm13279
Gm13278
Ifnz
Gm13272
Gm13277
Gm13276
Ruvbl2
Gys1
Pspn
Clpp
Alkbh7
Fndc3b
Zfp600
Pold2
Sertad1
Sycp3
Brms1
B4gat1
1700037H04Rik
Icam1
Txnl4a
Gm16286
Rbfa
Tnrc18
Elf1
Wbp4
Ide
Gnb2
Smarcd1
Gpd1
Itga5
Spc25
G6pc2
Gm13275
Msi1
Fmc1
Gm10354
Abt1
H4c9
H2bc11
H2ac11
Il17c
Gne
Zbtb40
Gja1
Phc1
Rex2
Eef2k
Unk
H3f3b
Mdga1
Mis18bp1
Kctd5
Afg3l1
Znhit3
Nags
Pllp
Acmsd
Cldn14
Stard6
4930503L19Rik
Tm7sf3
Med21
Sacm1l
Ticrr
Smagp
Speer4a
Gm10406
Rarg
Spata33
Chmp1a
Psmb7
Tmco2
Acot7
Cpsf1
Acp5
Ccdc113
Ing4
Usp31
Ndufb8
Sec31b
Cacnb3
Ucp2
Megf11
Rgl2
Wdr46
Pfdn6
Lsm5
Kctd2
Atp5h
Mrpl58
Pyroxd1
Herc4
Rwdd2b
Ltn1
Gipc1
Ptger1
U2surp
Etfbkmt
Nipsnap2
Mrps17
Gm525
Dgke
Ss18l2
Ppp3ca
Trim63
Gm5796
Kdm8
Adgre5
Kank3
Tac4
Gm9758
C1qbp
Gm13286
Gm13283
Gm13271
Jund
Iqcn
Sbno2
Ncor1
Hddc2
Pik3c3
Snx12
Lag3
Daxx
Smim40
Hmgxb4
Tom1
BC107364
Angel2
Rps6kc1
Plcd1
Rtn4rl1
Dph1
Ptprf
Med16
R3hdm4
Kiss1r
Taf12
Gmeb1
Zswim3
Acot8
Taok3
Eif2b3
Suds3
Snx18
Hus1b
H4c12
H2bc15
H2ac15
Myrf
Tcta
Rhoa
Amt
Zfp979
Lgals9
Mynn
Actrt3
Nicn1
Klf2
Mtg2
Abcf3
Srrm3
Ints11
Cptp
Tas1r3
Rnf44
Cdhr2
Plekha7
Nkg7
Cldnd2
Mllt6
Lim2
Gm38999
Megf8
Tmem145
Zfp523
Rab3gap2
Speer4d
Zfp532
Fads1
Trim2
Nupr1l
Nek2
Car6
Tekt2
Adprhl2
Nr6a1
Olfml2a
Fyco1
C2cd5
Ap1b1
Fam25c
Mettl25
Ccdc59
Sdha
Ccdc127
Gm19428
H2-DMa
Slc35d1
Insyn1
Col9a2
H2-DMb2
Sntb2
Vps35l
Abcb7
Zfp809
Cyp11a1
Epha2
Ncam1
Med14
Pigz
Eif4a2
Eif4b
Ninj2
Dync1h1
A930018P22Rik
Etfa
Scube2
2610301B20Rik
Zfp988
Snrnp70
Atp2a2
Dok4
Ubc
Cmip
Rfc5
Ankrd44
Prmt8
Abcg2
Mib2
Ccdc124
Ncoa7
Slamf8
Nfyb
B3gnt7
Uspl1
Kansl3
Fer1l5
Mfsd1
Hspb8
Ctdsp2
Vps37d
Dnajc30
Bud23
Smpdl3b
Kat6b
LOC666331
Gm11634
Poldip3
Knop1
Iqck
Srgap1
Tex14
Socs3
Twsg1
Dhx32
Tbrg1
Trim56
Snrpa1
Zfp984
Trim6
Npas4
Gm3448
Gm3417
9030025P20Rik
Mta3
H2-Q8
H2-Q6
Prss47
Mief1
Fgd1
Rbm48
Pex1
Smim17
Psma2
Mrpl32
Jarid2
Lipe
Tti2
Lta4h
Sgf29
Gpcpd1
Bcl11b
Zfp36
Plekhg2
H2-Q9
H2-Q7
Mtg1
Plekhg4
Olfr915
Rarb
Ripply2
Cyb5r4
Cyb561d1
Atxn7l2
Pltp
Spty2d1
Sh3glb1
Prdm10
Gm7244
Max
Pld2
Snx10
Slc17a7
Ppp1r15b
Mtch2
Pth2
Gfy
Myl9
Ect2
Accsl
Ube2j2
Zfp981
Trim27
Wfdc8
Wfdc6b
Tvp23b
Eif4e
Ccdc34
Twf2
Fam81a
Clpb
Slc39a3
Blmh
Ndufs1
Eef1b2
Zfp990
Telo2
Ptx4
Gtpbp4
Lman1
Uqcc2
Dcaf10
Kcnb1
Gm17019
Drd3
Prdx6
Grasp
Smdt1
Ndufa6
Poc1b
Galnt4
Dcp1a
Rap1gap
Septin3
Wsb2
Sumf2
Gm3752
Cc2d1a
4930432K21Rik
Klhl20
Ankrd45
Tyrobp
Utp3
Spink10
Fbxo38
Tmem116
Erp29
Ahi1
Ttll3
Extl1
Abcc4
Fam71e1
Emc10
Uri1
Gpn2
Cln8
Rnase12
Olfr750
Gpatch3
Gm10130
P2rx7
Taf13
Abl1
Fus
Hagh
Fahd1
Uqcrc1
Gipc2
Trip4
Pclaf
Adnp
Ptcd1
Cpsf4
Ptpmt1
Meiob
Saysd1
Irf5
Spaca6
Rabggtb
Msh4
Cryzl2
Snrpd3
Gucd1
Agmat
Aven
Muc1
Cnnm2
Usp30
Svop
Cenps
Nudt4
Onecut3
Dsg2
Tmem127
Ciao1
Rrs1
Adhfe1
Cog6
Trappc9
Ap3s2
Sp8
Caskin1
Trmt61a
Ckb
Srp19
Rasl10b
Mlst8
Bricd5
Cdk5rap1
Pgp
Crtc1
Cstf1
Aurka
Arhgap35
Ceacam16
Gm35549
Fam168a
1810010H24Rik
Polr3e
Drg2
Ccdc88b
Gm3264
Med1
Cdk12
Mrs2
Ms4a14
Gm21190
Serpinf2
Bhlha15
Eapp
Katnal2
AU041133
Hspa5
Zfp33b
Rnase4
Ang
Ptprz1
Cmc1
Cct8
Pink1
Mkrn3
Sppl2b
Lsm7
Cacng2
Zfp980
Dpf3
Pdss1
Dpys
Ms4a12
Zfp948
Ifngr1
N4bp1
Atxn2
Zcchc10
1700102P08Rik
Znfx1
H3c11
H2bc22
H2ac22
H1f5
Zswim8
Chchd1
Fut11
Spef1
Get1
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Gm3435
Tcf23
Preb
Prtg
Tsc1
Styxl1
Mdh2
Grtp1
Pstk
Man2b2
Dffb
Cep104
Zmym4
Rad9b
Zglp1
Chpt1
Exog
Ankle2
Gprc5c
Taco1
Vwa8
Orc5
Pcyt1a
Hemk1
6430571L13Rik
Speer4c
Gm21149
Gm21083
Slc10a5
Impa1
Ubac2
Nudt15
Fam32a
Cib3
Clptm1l
Rab8a
Fbxo9
Cilk1
Btbd9
Rnd3
Cdk5rap2
Slx1b
Bola2
Sema4b
Mrpl39
Coro1a
Fignl1
Trmo
Psmb2
Olfr401
Slc9a1
Spin2d
Tcea1
Fam53c
Cdc25c
Nectin2
Ptp4a1
Camta1
Grm2
Ube2f
Secisbp2l
Stx12
Qrich1
Qars
Rnf169
Pafah2
Bglap3
Bglap2
Bglap
Bcar1
Psmd7
Dse
Exosc8
Alg5
Rpl3
Cgnl1
Ndrg3
Hspa8
Aebp2
Pigc
4930558K02Rik
Sirt4
Mtdh
Adrm1
Tmed4
Ddx56
Tbc1d14
Pemt
Ywhae
Ogfod3
Hexdc
Gapdh
Fbxo46
Bhmg1
Med6
Wdsub1
Ddost
Slc15a4
Cnot2
Gm7762
6720489N17Rik
Rps3a1
Trmt10c
Pcnp
Aurkc
Mrps28
Dars
Nsfl1c
Ebna1bp2
Cfap57
Rtp2
H3f3c
Ndufaf1
Wdr77
Atp5pb
Man2c1
Kdm3a
Mif
Tmem134
Aip
Dguok
Gabpb1
Tmem54
Hdac2
Hpca
Gm21119
4930467E23Rik
Tmem167b
Mrpl4
Ndufab1
H3c3
H2bc3
H1f2
Gadd45b
Slc25a40
Dbf4
Lamc3
Xlr3c
Zcchc4
Syce1
Siglec1
Gm3411
Yipf2
Timm29
Agk
Mpc1
Btbd8
Cdk5rap3
Ccni
2010109A12Rik
Pcyox1l
Lpcat2b
Rrm1
Pex14
Tfdp1
Klhdc10
Dpy19l4