ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX118693 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◣ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Olfr806
Setd4
Cbr1
Abhd6
Acacb
Wwox
Aadacl2fm1
Slc7a15
Marchf3
Tmem211
Prl3c1
Olfr855
Olfr854
Fam227b
Dtwd1
Zfp949
Nemf
Tecpr1
Olfm1
Slc14a2
Sympk
Bmpr1b
Fbxw7
Malt1
Akirin2
Nkx2-6
Tent5c
Prxl2b
Maneal
Tmem33
Rasip1
Izumo1
Fut1
Fgf21
Cox8c
Olfr180
Npffr2
P4ha3
Clec2g
Znhit1
Plod3
Ovol2
Alg14
Vstm4
Rps29
Lrr1
Tll1
Prkdc
Mcm4
Ilf2
Mycn
Zdhhc12
Pkn3
Npbwr1
Gcgr
Ctnna3
Sycp2l
Gcm2
Tpm2
Ptbp2
Tmem131l
Nox3
Kpna1
Map10
Adam5
Dcpp1
Sacm1l
Edf1
Traf2
Jund
Iqcn
Cxcl1
H3c10
H2bc13
H2ac13
Olfr1359
Gzmk
Trim7
Trim41
Cbr3
Olfr1168
Cdrt4
Fbxo31
Naaa
Gnb5
Npy5r
Slc28a2
Slc13a2
Esr1
Mrln
Cpa1
Klf4
Kctd2
Atp5h
Paqr4
Pkmyt1
Pom121l2
Sbno2
Stk11
Nup153
Kcnj16
Atp5g1
Fam71f1
Ptgdr
Rasgrf1
4930563M21Rik
Rnase4
Ang
Gm525
Fam24b
Fam24a
Cuzd1
Cldn34d
Il31ra
Grap
Clcn4
Cyp27a1
Camk2g
Tacr2
Vgll2
Prkg1
Ccin
Pcdh20
Scn8a
Ifna6
Ifna5
Ifna7
Ifna11
4921509C19Rik
H3c2
H2ac4
H4c2
H4c1
H3c1
H1f1
Dlg4
Acadvl
Fam181b
Trim29
Ss18
Rph3al
Abcc12
Snrnp35
Rilpl2
Rab34
Proca1
Abt1
Gm17660
Asgr1
Ccn4
Fhl1
Tmigd1
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Wdr35
Zfp300
Akap8l
Cyth4
Mrpl58
Nt5c2
Liph
Trib3
Lrch4
Fbxo24
Sh3bp4
Dmrtc1c2
Dmrtc1c1
Gja4
H3c8
H4c8
H2ac10
Sspn
Mrps2
1700007K13Rik
Fam83a
Pde12
Mettl14
Habp2
Tro
AU018091
Kcnn2
Enpep
Slc5a6
Cad
Atraid
Pla2g4d
Gucy1a2
Runx2
Gm3415
Gm3402
4930449I24Rik
Sumf1
Best2
Carnmt1
B4galnt3
Trim17
H3f4
Cd44
Vmn2r102
Tmem125
Usp25
Tgm4
Tmem42
Xpnpep1
Nfrkb
Hps5
Gtf2h1
Nipal1
Cnga1
Htr7
Fga
Fgg
Birc5
Kcnk9
Tgfb2
Wdr3
Gdap2
Cables1
Defb38
Slc1a2
Ak5
Sbk2
Zfp692
Timm22
Nxn
Gpihbp1
Slfn4
Npm2
Sncaip
Camk2n1
Hexb
Wif1
Btrc
Med16
Cfd
Fmc1
Amotl1
Harbi1
Atg13
Cyp26a1
Creb3l3
Rgs18
Magel2
Limch1
Sgcz
Mkrn2os
Dynlt3
Sp8
Hoxb1
Fbxo8
Cep44
Rad51ap1
D6Wsu163e
Aurkb
Fndc7
Rara
Setbp1
Krt75
Ppp3r1
Ccdc58
Ppp1r37
Tube1
Fam229b
Pisd
Setd1a
Orai3
Cfap126
Ppl
Trim58
Hes7
Aloxe3
Dcaf5
Brpf1
Calm4
Gm648
Nlrp4c
Gm14151
Adamts19
Ptgr1
Kcnb2
Rrn3
Tbcel
Onecut3
Hemgn
Gas1
Phc2
Ptges
Fcrl6
Ccnt2
Dpysl3
Dbr1
Armc8
Rnase12
Olfr750
Safb2
Safb
Rbks
Babam2
Npas4
H4f16
H2aj
Obi1
Mrgprx2
C87436
H2bc6
H4c4
H3c4
Ms4a4b
Plekhb1
Hoxa1
Exosc2
Rasl10b
E030030I06Rik
Tdrd7
Rplp2
Slc25a22
Pidd1
Gpatch8
Dlgap3
Rad23a
Calr
Rsph3b
Ube2b
Cdkl3
Atxn2
Sorbs1
Txndc11
Csf2ra
Fbxw4
Mcl1
Slc15a1
Cdv3
Ube2s
Tex14
Tet2
Pibf1
Dis3
Arl4d
Eapp
Tmem231
Gabarapl2
Adgra2
Tmem181a
Oxnad1
Dph3
Tomm5
Hivep3
Efnb3
Gpx4
Ints3
Kcnk5
Bbs1
Bcl2a1a
Aqp3
Xbp1
Fubp3
Hoxb13
H4c3
H1f6
H1f3
Olfr1274
Ccdc171
Mtf2
Rarb
Zfhx2
Thtpa
Pdgfrb
Cdx1
Slc43a1
Mkrn1
Xylb
BC107364
H3c3
H2bc3
H4c6
H3c7
H2bc9
Uri1
Cdk15
Socs3
Bcl2a1b
Fitm2
Dennd2c
H2bc12
H2ac12
H2bc7
H2ac7
Znfx1
H1f2
Pald1
Notch4
Unk
H3f3b
Tm7sf3
Med21
Hmox2
H4c9
H2bc11
H2ac11
H2bc8
H2ac8
Tmem191c
Prdx6
LOC666331
Gm11634
Plbd2
Enpp4
H3c6
H4c11
Ifna13
Taf13
Srp14
Adcy5
Bmerb1
Oaz2
Rdm1
Aldh9a1
Agpat5
Tfrc
Brwd1
Abl1
Cmip
Bcl2a1d
Zbtb4
Slc35g3
Polr2a
Cidea
Capns1
Ttc39d
Rhobtb1
A930033H14Rik
Tal2
Mafa
Hoxb4
Gm10710
Dchs2
Tcp11
Pspn
Clpp
Alkbh7
Ifitm7
Slc6a16
Cd37
Cd209a
Mtnr1a
Abca3
1700037H04Rik
Ksr1
Kat7
Oasl1
Pramel32
Snai1
Poldip3
H3c11
H2bc22
H2ac22
H1f5
Cic
Klf2
Nudt4
Cerk
Foxp1
Abca17
Ncor1
Pmepa1
Fbxo44
Fbxo2
Hspa8
Pigz
Ubb
Ucp2
Ier5
H4bc24
H2bc23
H2ac24
H2ac23
Abr
Lag3
H2bc14
Eif4a2
Mylip
Fndc3b
Baz1b
Tnfsfm13
Tnfsf12
Lasp1
Gm36210
Rpgrip1
Dnah7b
Cnn3
Taf12
H4c18
Gmeb1
Ect2
Bcat2
Mreg
Ttpal
Hspa5
Taf4
Tmem18
Xpo1
Dppa2
H3c15
H3c14
H2ac19
H2ac18
Ncmap
Gramd1b
Dpagt1
Ier2
Tm2d2
Adam9
Nek2
Sub1
Rsc1a1
H4c14
H3c13
H2bc18
Wdtc1
Ing1
Cars2
Ap3s2
Rnf19b
Dusp9
Mdga1
Trpm3
Fbxo6
Extl1
Phf5a
Aco2
Itga5
Adgre5
Ints6
Rusc1
Angptl8
Gtpbp4
Rarg
Zfp827
Sgf29
Nabp1
Nodal
Col6a6
Rnf13
Gm20594
Rcc1
Gadd45b
Hoxb5
Eif4b
Osbpl1a
Nfyb
Ubr4
Smyd2
Srsf3
H2bc21
H2ac21
H2ac20
Cfap74
Plekha7
H2bc4
H2ac6
Hsd17b14
Sfi1
Eif4enif1
Hmbs
H2ax
Golga7
Sec22c
Ubxn2a
Ttk
Atad2b
Fam53c
Cdc25c
H4c17
Bmt2
Zdhhc18
Slc33a1
Galnt2
Ccdc92b
Sertad2
Gmps
H4c12
H2bc15
H2ac15
Tmem167b
Fcgr4
Evi5
Pomgnt2
Foxo3
Taar6
Grasp
Icam1
Letmd1
Ppdpf
Gtf2a1
Unc93a2
Gstp2
Gstp1
1700067K01Rik
Hjurp
A730008H23Rik
Zc3h12a
Kng2
C1qbp
Jarid2
2510009E07Rik
Hrob
Arrdc2
Dedd
H1f4
Gm3448
Gm3417
Dock6
Hspb8
Hsp90aa1
Hnrnpab
Tctex1d4
Plk3
Btbd19
Cyp11a1
Tmem50a
Syf2
Rsrp1
Nufip2
Ndufs7
Septin1
Psmd12
Pitpnc1
Slc29a1
Mymx
Smarca5
Btg2
Smc3
Sumo1
Mphosph9
2810006K23Rik
Dcaf4
Asph
Mok
Nectin2
Cenpm
Pold2
Zbtb37
Rai1
Gm3435
Rab7
Elavl3
Acp6
Mtg2
Guf1
Ube2o
Atp2a2
Ei24
Nop58
Tob1
Caskin1
Ubc
Dgke
Ndufb8
9030025P20Rik
Tbl1xr1
Btbd16
Rab37
Slc2a9
Rpl3
Arf4
Cox7a2l
Misp3
Cited2
Nudt1
Sntb2
Slc17a7
Septin11
Jam2
Arhgap19
Mettl16
Il17b
Epha2
Tsc22d1
Pus1
Ep400
Sdha
Rnd3
Ccdc127
Nanog
Sirt4
Kdm3b
Gja1
Prdx2
Junb
Zfp740
Csad
Bcar1
Atp6v0d1
Agrp
Ninj2
Tbc1d10b
Mylpf
Acot7
Zswim8
Chchd1
Usp37
Ranbp3l
Stra6
Fanci
Spata33
Chmp1a
Acy3
Tefm
Pcx
Ggact
Lefty1
Sepsecs
Porcn
Myrf
Cotl1
Acsl4
Uqcr11
Mbd3
Yars2
Calm2
Hexim1
Zfp532
S1pr2
Thrsp
Slc9a1
Cbx4
Kazn
Syngr1
Rps11
Dctn6
Stk3
Taok3
Ttf1
Cfap77
Rpl11
H2-DMa
Pml
Chchd5
Agbl5
Dtx4
Sec31b
Rfc5
Car5a
Actn4
Ankrd39
Taar7a
Nphs1
Kirrel2
Olfr646
Stap2
Phc1
Mpnd
Arl15
Mmp11
Itga3
Gm867
Chchd10
Sde2
Prdm10
Atg14
Chd9
Rnf169
Sertad1
Map7
Unc93a
Kank3
Tmem170
Senp3
Ptprf
Coa7
Blmh
Fus
Pnp
Mybpc3
Rab11fip2
Itpk1
Hgsnat
Rcor2
Resf1
Wdr92
Pno1
Gpcpd1
Utp14b
Psmd7
Acsl3
Ctdsp2
Mis18bp1
Hrh2
Thap4
Spg20
Gtf3a
Rnaset2b
Srsf5
Eif2s3y
Twsg1
Mbd6
Ddit3
Ceacam12
Insig1
Dpp4
Tmem107
Mettl7a2
Methig1
Higd1c
Zfp143
Stra8
Txnip
Krt15
Krt13
Msgn1
Kdm3a
Ghdc
Haus1
Atp5a1
Msi1
Rnaset2a
Pltp
Csrnp2
Ppp1r10
Mrps18b
Atat1
Slc18b1
Rps12
Mib2
Tmem135
Dnajb9
Uck1
Coro1b
Fut8
Idh3b
Fads1
Tnrc18
Sbp
Mro
Zswim3
Acot8
Gapdh
4921539E11Rik
S100g
Fam32a
Cib3
Capn3
Pbld2
Hnrnph3
Llgl2
Ddit4
Klf6
Nsrp1
Zfp36l1
Psmb7
Plxdc1
2410137M14Rik
Naglu
Aqp7
Sema4a
Aven
Haus4
Psma6
Calm1
Rbm14
Gm21992
Usp4
Msh6
Gpx1
Hagh
Fahd1
Wsb1
Cphx3
Cphx2
Cphx1
Vmn2r72
Spred2
Sgk1
Ttc24
Iqgap3
Rnf103
Tas2r134
Cltc
Gtf2a1l
Gtf2b
Ctsl
Tcta
Rhoa
Amt
Nsd1
Lrrc10b
Fam25c
Slc35d1
D230025D16Rik
Crlf2
Cdk5rap2
Smdt1
Slx1b
Ndufa6
Bola2
C1ra
Kif2c
Eif4h
Hsp90ab1
Pyroxd1
Nkg7
Cldnd2
Brd2
Trim40
Trim31
Raf1
Aplp2
Atp1a1
Ankrd28
Jpt1
Ankrd44
Tcirg1
Tcim
Ndufs8
Mpp7
Gadd45a
Nags
Gpr152
Cabp4
Vars
D17H6S56E-5
Arg1
Ptprcap
Prdx1
Actb
Rxfp4
Pick1
Mobp
Hbegf
Eif4g2
Caln1
Abcf3
Ss18l2
Zfp980
Vps37d
Stk35
Rwdd2b
Rpl17
Ltn1
BC031181
Mta3
Dnajc27
Dgat2
Srgn
Vps35l
Slc25a13
Clu
Tmem116
Mat2a
Erp29
Tubb4b
Stpg3
Slc34a3
Fam166a
Eif2b3
Mrm2
Tcte3
Slc4a9
Ermard
BC005537
Id3
B3gnt7
Dhx8
Cyfip2
Zfp791
Dhx32
Copz1
H2-Q8
H2-Q6
Rab8a
Hspbp1
Brsk1
Lman1
Il3ra
Ccng2
Mdm4
Kmt5b
Ell3
Trmt1
Serpinf2
Nacc1
Mpzl1
Spen
Zfp988
Errfi1
Exosc6
Dpf3
Adam32
Tmbim1
Srsf2
Mfsd11
Mettl23
Jmjd6
Gipc1
Lipe
Men1
Map4k2