ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX337439 | Liver
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◣ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

H4c3
H1f6
Arl4d
Prdx2
Junb
Ttc39d
Hspa8
H2bc6
H4c4
H3c4
H2bc7
H2ac7
Unk
H3f3b
Zbtb4
Slc35g3
Polr2a
Rdm1
Ing1
Cars2
Jund
Iqcn
Arrdc2
H3c15
H3c14
H2ac19
H2ac18
Nabp1
Btg2
P4ha1
LOC666331
Gm11634
Taf13
Tmem167b
Txndc11
Eapp
Greb1
Mafb
Tmem50a
Syf2
Rsrp1
Calm2
Srsf5
Tob1
Clu
Ints6
Rnaset2b
Dgat2
Rad23a
Calr
Rnaset2a
Ddit4
Rab37
Slc9a3r1
Usp4
Gpx1
Eif4b
Mybpc3
Hsp90aa1
Atp1a1
H2bc21
H2ac21
H2ac20
Calm1
Hspa5
Tuba4a
Stk16
Glb1l
A630095N17Rik
Dpagt1
Hmbs
H2ax
Epha2
Clic4
Utp14b
Acsl3
Mphosph9
2810006K23Rik
Hexim1
Man1a
Ier2
Zfp36l1
Sde2
Rpl3
Syngr1
Hhex
Vcl
Raf1
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Vegfa
Taf4
Klf6
Dnajb9
Irs2
Nufip2
Cebpd
Znfx1
H1f4
H2-DMa
Brd2
Hnrnpab
Cited2
Ttc41
Hsp90b1
Ipmk
Cisd1
Jun
Mertk
Fam53c
Cdc25c
Ubb
Tex14
Cebpa
Pus1
Ep400
Hsp90ab1
Slc35b2
Actb
Trp53inp1
Sub1
Ctsl
Tubb4b
Stpg3
Slc34a3
Fam166a
Tob2
Ppp1r3c
Ndufaf3
Impdh2
Dalrd3
P4hb
Arhgdia
Rnd3
Zbtb37
Rnf103
Rnf19b
Rhob
Frmd6
Eef1a1
Zfand5
Socs3
Aplp2
H2bc12
H2ac12
H4c9
H2bc11
H2ac11
Fus
Slc9a1
Amd2
Amd1
Unc5b
BC005537
Mknk2
Rcc1
Olfr806
Sephs2
Klf7
Id3
Slc38a2
Vamp1
Plk2
Rhou
Kpna1
Ttc23
Irf8
Susd6
H4c14
H3c13
H2bc18
H4c17
Idh3b
Acly
Whamm
Fsd2
Mat2a
Dnaja1
Ier5
H4f16
H2aj
Sspn
Kdm4c
Acy3
Tbx10
Rsph9
Mad2l1bp
Gtpbp2
Hs3st3b1
Fdx1
Ell2
Prdx1
Shld2
Glud1
Herc2
Mapkapk2
Hnrnpa2b1
Cbx3
Snrpe
Slc35f6
Ndel1
Klhl21
Rplp2
Idi1
Rab43
Cracr2b
Sesn2
Traf7
Rab26
Irak2
Eif4g2
Ifrd1
Nudt4
Slc31a1
Fkbp15
Sirt1
Wsb1
Fos
Slc25a3
Gtf2a1
Hjurp
A730008H23Rik
Tsc22d2
Gtf2b
Sf3b1
Cebpb
Tctex1d4
Plk3
Btbd19
Gadd45a
Neu1
Marchf3
Insig1
Tcta
Rhoa
Amt
Sqstm1
H3c2
H2ac4
H4c2
H4c1
H3c1
H1f1
Tnrc6c
Id2
Maml1
Lag3
Hspb8
Nr3c2
H3c8
H4c8
H2ac10
Trf
Ifi27
Ddx24
Ncoa3
Klf10
Ncl
Mcl1
Phf2
Ctnnb1
Nfkbia
Ugdh
Nfkbiz
Jpt1
Adk
D230025D16Rik
Selenop
Srsf2
Mfsd11
Mettl23
Jmjd6
Gapdh
Arvcf
Tango2
Ube2h
Btg1
Pdia4
Csrnp2
Cd81
Acer3
Peli1
Plec
Fasn
Arl15
Ftl1
Bax
Pdia3
Catsper2
Skida1
Mllt10
Fzd5
Jak1
Rab42
Gpat4
Hnrnpu
Cyp2d10
Dhx8
Rnd1
Mtarc2
Pcf11
Taf12
Gmeb1
Igfbp4
Ppp1r14b
LOC114841036
Fkbp2
Vegfb
Lgr4
Tpcn1
Iqcd
Myo6
Arl6ip1
Msmo1
Baiap2
Med23
Tmem129
Tacc3
Slbp
Srsf3
B2m
Luzp1
Ccnyl1
Ern1
Ppp1r10
Mrps18b
Atat1
Raph1
Sec22c
Gpcpd1
Slc25a30
Gtf2f1
Cat
Atf3
Kctd12
Gclc
Senp3
Eif4a1
Cd68
Ppp1r15a
Plekha4
Dusp1
Tat
Herpud1
H4c6
H3c7
H2bc9
Acer2
Psmb10
Lcat
Ctrl
H2-K1
Teddm1a
Glul
Haus1
Atp5a1
Sap18b
Sap18
Cyb5a
Foxo3
Smc3
Gfod1
Mterf1a
Tra2b
Csrnp1
Snrk
Cdo1
Sympk
Foxa3
H3c3
H2bc3
H1f2
Slc16a10
Nkx2-6
Rbm14
Gm21992
Flnb
Zfp36l2
Sc5d
Fam214a
Polg2
Ddx5
Cep95
Fam174c
Cirbp
Slc5a3
Mrps6
Tsc22d1
Dnajb1
Stat2
Apof
Sorbs1
Ttc7
Degs1
Hexb
Zbed5
Chchd2
Slc26a8
Mapk14
F2r
H3f3a
Ccdc9
Mbd6
Ddit3
Kctd5
Snx18
Ppp1r2
Snai1
Ass1
Angptl4
Adap2
Skp1
Selenbp2
Mterf1b
Foxq1
Dnajc3
Jarid2
Adpgk
Dmxl1
Ddost
Isoc2a
Pdlim5
Net1
Trappc3
Map7d1
Dbi
3110009E18Rik
Parp10
Grina
Actn4
Tmem230
Pcna
Cds2
Zfp36
Plekhg2
Etnk2
Ren2
Ren1
Slc30a9
Dusp6
Stard5
Hmga1b
Hmga1
AI413582
Dnajb4
Nrd1
Stra8
Ankrd11
Pabpc1
Atp5g3
Scp2
Scarb1
Actg1
Ulk1
Ankrd39
Ddx3x
Rbm4b
Ahcy
Hnrnph1
Tcf23
Preb
Abhd1
Kcnk5
Cotl1
Fth1
Aadacl2fm1
Mrpl1
Cry2
Mtfr1
Spout1
Endog
Rfng
Gps1
Plpp1
Hsph1
Lipg
Tmc5
Ost4
Emilin1
Jup
Ggcx
Oxtr
Rtn3
Tle1
Osgin1
Necab2
Kmt5b
Hspa1b
Gadd45g
Ankrd37
Spg11
Dync1h1
Ptprk
Wdr83os
Wdr83
Man2b1
Tdo2
Tpi1
Spsb2
Ripk2
Arhgap29
Map2k1
Myo18a
Txn1
Pdk2
Cpeb2
Ostc
Dynll2
Trp53i13
Abhd15
Atp2a2
Itpr1
Atl2
Fech
Nedd9
Rbbp6
Pygl
Zfp963
Olfr855
Olfr854
Larp1b
Paxip1
Map2k4
Cap1
Gramd1b
Ptms
Lnp1
Glce
Slc6a9
Cldn3
Dip2b
H1f3
H2bc8
H2ac8
H3c6
Dnajc1
Bsg
Pdcd4
Glrx5
Psmd12
Pitpnc1
Hdlbp
Xylb
H4c11
Bahcc1
Tnfrsf1b
Gnb1
Pnp
Kntc1
Ccdc117
Dhcr24
Ero1b
Abca1
Foxo1
Mafk
Lrrc8a
Irf6
Sptan1
Iffo2
Hao1
Pcif1
Daam1
Slc27a2
Alcam
Macrod1
Rnf38
Pik3c2a
Ulk2
Mapk8
Clec2d
Znrf2
Tiparp
Pikfyve
Idh1
Slc6a4
Acap2
Fn1
Serinc3
Plcb1
Crot
Tnrc6b
Zer1
Tbc1d13
Abtb2
Slc17a7
Pih1d1
Aldh16a1
Prss35
Pdhb
Lsm2
Hspa1l
Hspa1a
Hif1a
Litaf
Edem1
Wbp1
Ino80b
Smad7
Kdelr2
Dus1l
Mrpl53
Mogs
Mlxipl
Pik3r1
Map4k5
Atl1
Acad12
Erf
Crym
Abca14
Slc20a1
Slc66a1
Akr7a5
Il31ra
Sirt4
Nt5dc3
Creld2
Alg12
Dhx9
Farp2
Atg4d
Tpt1
Hmgcs2
Sgk1
Tarbp2
Map3k12
Npff
Tuba1c
Etv5
Zfp568
Ptpn1
Zswim3
Acot8
Tmem205
Rab3d
Ccdc159
Cpm
Plppr2
Apob
Lifr
Ctbs
Stx16
Ubr2
Ces1c
Akap8l
Tgm2
Cep43
Jag1
Rps15
Apc2
Azin1
Ephx2
Fam207a
Gpt2
4833420G17Rik
Fads2
Pkd1
Hbegf
Eif3a
Sh3bp2
Pdlim7
Gch1
Hacd2
Sec61a2
Hmox2
Nmral1
Serpine1
Abhd6
Pdhx
Apip
Cpt2
Dnajb2
Selenok
Nadsyn1
Dhcr7
Ppp4c
Aldoa
Zfp341
Pxmp4
Actr8
Fmo5
Gadd45b
Pim3
Esyt2
Lbh
Slc50a1
Efna1
Baiap2l1
Chordc1
Baz2a
Atp5b
Mrpl44
Nfam1
Usp42
Rfk
Csrp2
Slc26a2
Pde6a
Rab5b
Pmel
Cdk2
Stat3
Wdr3
Gdap2
Camk2n1
Sertad2
Pcx
Pklr
Fam20c
Ubxn6
Ptk2b
Hdgfl2
Epc1
Pgrmc1
Cstf2t
Alg1
Otud3
Klf2
Txnl1
Mavs
Errfi1
Itch
Gnai2
Wwox
Urgcp
Srp9
Gstp2
Gstp1
Bach1
Raly
Mxd4
Hgsnat
Nsrp1
Mcidas
Ccno
Nme1
Pdia6
Ero1a
Ppia
Ivd
Cldn11
Tmbim6
Surf6
Surf2
Surf1
Rpl7a
Med22
Rbm15b
Manf
Drg2
Rpl38
Nars
Retsat
Elmod3
Ttyh2
Cpsf4l
Pkn2
Sec22b
Ncoa4
Trim25
R3hdm4
Kiss1r
Arid3a
Aadacl2fm3
Ssbp1
Tle4
Trabd
C3
Tfrc
Creb3l3
Dlc1
Scnn1g
Map2k2
Nxt1
Gzf1
Chka
Fam131c
Pank2
Slc25a33
Adora1
Eef2
Dapk3
Mbtps1
Pias4
Etfrf1
Casc1
Fbxo34
Onecut2
Fgfr3
Rps6
Arl4c
Acsl1
Abcb10
H2-Q10
Aldh2
Srsf4
Sh3glb1
Fam53a
Plpp3
Kyat1
Styxl1
Mdh2
Cyp27a1
Mtr
Hnrnpa0
Bms1
Mtnr1a
Tex45
Pex11g
Pi4k2a
Morn4
Srp19
Tti2
Napepld
Ptma
Top1
Zyx
Kmo
Fh1
Amacr
Zranb1
Slc25a22
Pidd1
Gm15517
Acp4
Rab33b
Slc24a3
Cend1
Fkbp4
Selenos
Hmox1
Dlgap4
Mfsd14a
Ctdp1
Paip2
Psap
Cerk
Sertad1
Deptor
Txnip
Rabgef1
Il17b
Arrdc3
Rpl3l
Rapgef6
Msrb1
Ddx10
Pnrc1
Rcbtb1
Cdc42
LOC547349
H2-L
H2-D1
Ppdpf
Tmem199
Sebox
Poldip2
Serpina1b
Gtf3c6
Eif1
Ints8
Kif1c
Inca1
Icam1
Tmem60
Phtf2
Scgb1a1
Rhpn2
Aldob
H2bc4
H2ac6
Abcd3
Smtn
Xrra1
Spcs2
Mpc2
Dcaf6
Mylip
Evi5
Shb
Tgoln2
Tgoln1
Plcd3
Acbd4
Phyh
Grhpr
Gpx4
Coro1b
Gpr152
Cabp4
Ptprcap
Fra10ac1
Ppp2r5d
Fbrsl1
Prodh
Dnm2
Ndfip1
Nfyb
Mrpl39
Slc18a1
Atp6v1b2
Diaph1
Klhl24
Tmem107
Atp10d
Them7
Slc14a2
H4c12
H2bc15
H2ac15
Mapk1
Sned1
Hmgcl
Als2
Fam222a
Zbtb8os
Rbbp4
Smad1
Arih1
Sp8
Hagh
Fahd1
Ell3
Tpst1
Eprs
Eif4ebp2
Efnb1
Npb
Sirt7
Pcyt2
Dtwd2
Sp1
Safb2
Safb
Serinc4
Serf2
Hypk
Klf3
1810013L24Rik
Ubxn2a
Atad2b
Uqcr11
Mbd3
Tbxas1
1700067K01Rik
Slc12a7
Spry4
Samd1
Sod1
Dstn
Ncor1
Selenbp1
Slc3a2
Pigl
Snx22
Ppib
Becn1
Map3k9
Slc38a3
Hykk
Hmgcr
Rpl22l1
Gjb2
Uspl1
1700001O22Rik
Rps2
Rnf151
Ndufb10
Tmem126a
Fzd7
Ssh2
Rplp0
Gcn1
Map1lc3b
Maf
Gucy2d
Baz1a
Slc25a11
Rnf167
Pfn1
Eno3
Lactb
Slc39a4
Cpsf1
Ets1
Ccin
Pnpla8
Hook2
Echdc3
Gls
Vta1
A130010J15Rik
Srsf6
Tprn
Ssna1
Anapc2
Zfp526