ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4369776 | Germline stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◣ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Olfr806
Abhd6
Wwox
Cldn34d
Nkx2-6
Setd4
Cbr1
Aadacl2fm1
Tmem18
Gm525
Kpna1
Vmn2r102
Pald1
Gm20594
Gzmk
Fbxw4
Tent5c
Sympk
Oasl1
Csf2ra
Cox8c
Tmem211
Pcdh20
Olfm1
Tecpr1
Cdh12
E030030I06Rik
Slc14a2
Taar6
Taar7a
Vmn2r72
Sbno2
Stk11
Chchd5
Agpat3
Acacb
Hexb
Gm5458
Txndc11
Gcgr
Esr1
Vmn2r4
Dcdc2a
Cartpt
Tmem125
Alg8
Olfr855
Olfr854
Tmem267
Chd9
Clcn4
Fbxo27
Hgsnat
Timp3
Il31ra
Erg
Ankar
Eef2
Dapk3
Gm10710
Dchs2
Atp5g1
Rab34
Proca1
Vmn1r2
Cplane2
Rbks
Babam2
Olfr1274
Abca3
Abca17
Cbr3
Aoc3
Tacr2
Eif2b3
Ifna13
Pramel32
Zfp143
Atg2a
Tm2d2
Adam9
Pex3
Adat2
Nfam1
Ankrd39
Ankrd23
Adap1
Mink1
Tmprss6
4931408C20Rik
Dock1
Smarca5
Cebpb
Col6a6
Gpn2
Spint4
Usp33
Miga1
Trim50
Fkbp6
Wfdc13
U2af1
Pisd
Cdkn2d
Oxgr1
Speer4f1
Sstr1
Uri1
Cln8
Pspn
Clpp
Alkbh7
Auh
Nek2
Mab21l3
Tomm5
Intu
Atp9a
Plekhn1
Klhl17
Slx1b
Bola2
Coro1a
Ubxn8
Gsr
Map2k6
Tm4sf5
Zfp438
Rarb
Aldh9a1
Dhdds
4932438H23Rik
Setdb2
Gm45935
Cab39l
Rab3a
Mpv17l2
Ifi30
Stra8
Wdr91
Abl1
Maats1
Cox17
Txndc5
Ccdc88b
Acap1
Kctd11
Dcun1d1
Ly6l
Ttc24
Iqgap3
Pdcd1lg2
Sox8
Lmf1
Hspa5
Thada
Bmt2
Guf1
Sspn
Foxp1
Zar1l
Rgs12
Fam47e
Gltp
1810010H24Rik
Tmem259
Cnn2
Arf4
Ice1
Cd163l1
Ntrk2
Wdr63
Bcl10
Sptbn4
Blvrb
Fndc3b
Gm19428
Ggt6
Zbtb40
Pim1
Mcl1
Slc15a1
Cdv3
Ube2s
H3c8
Marchf3
Tex14
Jund
Tet2
Iqcn
H4c8
H2ac10
Pibf1
Dis3
Rad23a
Calr
Arl4d
Slc7a15
H2bc6
Eapp
Tmem231
Gabarapl2
Adgra2
Fbxw7
Akirin2
Tmem181a
H3c10
H2bc13
H2ac13
Oxnad1
Dph3
Camk2n1
Hivep3
Efnb3
Bmpr1b
Gpx4
Rplp2
Ints3
Plekhb1
Kcnk5
Bbs1
Bcl2a1a
Aqp3
Xbp1
Fubp3
Hoxb13
H4c3
H1f6
Nemf
H1f3
Ccdc171
H3c2
H2ac4
Mtf2
Tmem33
Slc25a22
Pidd1
Zfhx2
Thtpa
Pdgfrb
Cdx1
H4c2
H4c1
H3c1
Slc43a1
Mkrn1
Xylb
Fam227b
Dtwd1
BC107364
Rps29
Lrr1
H3c3
H2bc3
H4c6
H3c7
H2bc9
H4c4
H3c4
Cdk15
Socs3
Bcl2a1b
Fitm2
Dennd2c
Zfp949
H2bc12
H2ac12
H2bc7
H2ac7
Znfx1
H1f2
Cyp26a1
Notch4
Ilf2
Unk
H3f3b
Trim29
Tm7sf3
Med21
Hmox2
H4c9
H2bc11
H2ac11
H2bc8
H2ac8
Tmem191c
Clec2g
Prdx6
LOC666331
Gm11634
Plbd2
Enpp4
Gnb5
H3c6
H4c11
Taf13
Olfr180
Srp14
Adcy5
Maneal
Bmerb1
Oaz2
Rdm1
Agpat5
Tfrc
Brwd1
Rasip1
Izumo1
Cmip
Bcl2a1d
Trim7
Zbtb4
Slc35g3
Polr2a
Cidea
Capns1
Ttc39d
Rhobtb1
A930033H14Rik
Tal2
Mafa
Fut1
Fgf21
Hoxb4
Tcp11
Ifitm7
Slc6a16
Cd37
Cd209a
Mtnr1a
1700037H04Rik
Ovol2
Ksr1
Kat7
H1f1
Snai1
Poldip3
H3c11
H2bc22
H2ac22
H1f5
Pom121l2
Cic
Mycn
Klf2
Nudt4
Cerk
Ncor1
Pmepa1
Fbxo44
Fbxo2
Hspa8
Pigz
Prl3c1
Creb3l3
Ubb
Ucp2
Ier5
H4bc24
H2bc23
H2ac24
H2ac23
Abr
Lag3
H2bc14
Eif4a2
Mylip
Baz1b
Tnfsfm13
Tnfsf12
Lasp1
Gm36210
Rpgrip1
Dnah7b
Cxcl1
Cnn3
Taf12
H4c18
Gmeb1
Ect2
Adam5
Bcat2
Mreg
Ttpal
P4ha3
Taf4
Xpo1
Dppa2
H3c15
H3c14
H2ac19
H2ac18
H4f16
H2aj
Prxl2b
Ncmap
Gramd1b
Dpagt1
Cyth4
Ier2
Vgll2
Usp25
Sub1
Rsph3b
Rsc1a1
H4c14
H3c13
H2bc18
Wdtc1
Ing1
Cars2
Ap3s2
Rnf19b
Trib3
Dusp9
Mdga1
Trpm3
Fbxo6
Extl1
Tmem131l
Kcnj16
Phf5a
Aco2
Mettl14
Malt1
Prkdc
Mcm4
Itga5
Adgre5
Ints6
Fam24b
Fam24a
Cuzd1
Rusc1
Angptl8
Gtpbp4
Rarg
Zfp827
Sgf29
Nabp1
Nodal
Rnf13
Rcc1
Fhl1
Gadd45b
Cd44
Ccin
Hoxb5
Eif4b
Tll1
Osbpl1a
Nfyb
Ubr4
Smyd2
Srsf3
H2bc21
H2ac21
H2ac20
Cfap74
Tmigd1
Plekha7
H2bc4
H2ac6
Hsd17b14
Sfi1
Eif4enif1
Dlg4
Acadvl
Hmbs
H2ax
Golga7
Gja4
Sec22c
Ubxn2a
Ttk
Atad2b
Akap8l
Slc13a2
Fam53c
Cdc25c
H4c17
Zdhhc18
Slc33a1
Galnt2
Ccdc92b
Habp2
Sertad2
Gmps
H4c12
H2bc15
H2ac15
Tmem167b
Fcgr4
Evi5
Pomgnt2
Scn8a
Foxo3
Grasp
Trim41
Icam1
Tgm4
Letmd1
Tmem42
Ppdpf
Gtf2a1
Unc93a2
Gstp2
Gstp1
1700067K01Rik
Hjurp
A730008H23Rik
Zc3h12a
Kng2
C1qbp
Mrps2
1700007K13Rik
Jarid2
2510009E07Rik
Hrob
Arrdc2
Dedd
H1f4
Gm3448
Gm3417
Dock6
Hspb8
Rgs18
Klf4
Hsp90aa1
Ppp3r1
Hnrnpab
Tctex1d4
Plk3
Btbd19
Cyp11a1
Tmem50a
Syf2
Rsrp1
Xpnpep1
Nufip2
Ndufs7
Rph3al
Septin1
Psmd12
Pitpnc1
Sp8
Slc29a1
Mymx
Btg2
Smc3
Sumo1
Mphosph9
2810006K23Rik
Dcaf4
Nfrkb
Abcc12
Lrch4
Fbxo24
Olfr1359
Asph
Mok
Map10
Nectin2
Fbxo31
Rrn3
Cenpm
Pold2
Kctd2
Atp5h
Zbtb37
Rai1
Gm3435
Rab7
Elavl3
Acp6
Mtg2
Ube2o
Atp2a2
Ei24
Trim17
H3f4
Nop58
Tob1
Caskin1
Ubc
Dgke
Ndufb8
9030025P20Rik
Tbl1xr1
Btbd16
Rab37
Slc2a9
Cpa1
Rpl3
Npffr2
Cox7a2l
Misp3
Cited2
Nudt1
Sntb2
Slc17a7
Septin11
Zdhhc12
Pkn3
Jam2
Hoxa1
Arhgap19
Mettl16
Il17b
Epha2
Tsc22d1
Pus1
Ep400
Sdha
Rnd3
Ccdc127
Onecut3
Nanog
Sirt4
Kdm3b
Gja1
Prdx2
Junb
Zfp740
Csad
Bcar1
Atp6v0d1
Agrp
Ninj2
Tbc1d10b
Mylpf
Acot7
Zswim8
Chchd1
Usp37
Ranbp3l
Stra6
Fanci
Spata33
Chmp1a
Acy3
Tefm
Sacm1l
Pcx
Ggact
Lefty1
Sepsecs
Porcn
Myrf
Cotl1
Acsl4
Uqcr11
Mbd3
Yars2
Calm2
Hexim1
Zfp532
S1pr2
Thrsp
Slc9a1
Cbx4
Kazn
Syngr1
Rps11
Dctn6
Asgr1
Stk3
Mrpl58
Tpm2
Taok3
Ttf1
Cfap77
Rpl11
H2-DMa
Pml
Agbl5
Dtx4
Sec31b
Rfc5
Ccn4
Car5a
Alg14
Actn4
Nphs1
Kirrel2
Olfr646
Stap2
Phc1
Mpnd
Arl15
Mmp11
Itga3
Gm867
Chchd10
Sde2
Prdm10
Atg14
Rnf169
Sertad1
Map7
B4galnt3
Dcpp1
Unc93a
Kank3
Tmem170
Senp3
Ptprf
Hps5
Gtf2h1
Coa7
Blmh
Fus
Pnp
Mybpc3
Rab11fip2
Itpk1
Rcor2
Resf1
Wdr92
Pno1
Gpcpd1
Utp14b
Psmd7
Acsl3
Ctdsp2
Mis18bp1
Hrh2
Thap4
Spg20
Gtf3a
Rnaset2b
Srsf5
Eif2s3y
Twsg1
Mbd6
Ddit3
Ceacam12
Insig1
Dpp4
Tmem107
4921509C19Rik
Mettl7a2
Methig1
Higd1c
Txnip
Krt15
Krt13
Msgn1
Kdm3a
Ghdc
Haus1
Atp5a1
Msi1
Rnaset2a
Pltp
Csrnp2
Ppp1r10
Mrps18b
Atat1
Slc18b1
Rps12
Mib2
Tmem135
Tube1
Fam229b
Dnajb9
Uck1
Coro1b
Sh3bp4
Fut8
Sumf1
Idh3b
Npbwr1
Fads1
Tnrc18
Sbp
Mro
Zswim3
Acot8
Gapdh
4921539E11Rik
S100g
Fam32a
Cib3
Capn3
Carnmt1
Pbld2
Hnrnph3
Llgl2
Gm3415
Gm3402
Ddit4
4930449I24Rik
Klf6
Nsrp1
Zfp36l1
Psmb7
Plxdc1
2410137M14Rik
Naglu
Aqp7
Sema4a
Aven
Haus4
Psma6
Sbk2
Calm1
Rbm14
Gm21992
Usp4
Msh6
Gpx1
Hagh
Fahd1
Wsb1
Cphx3
Cphx2
Cphx1
Ss18
Spred2
Sgk1
Rnf103
Tas2r134
Cltc
Gtf2a1l
Gtf2b
Ctsl
Tcta
Rhoa
Amt
Nsd1
Lrrc10b
Fam25c
Slc35d1
D230025D16Rik
Crlf2
Tro
Cdk5rap2
Smdt1
Ndufa6
C1ra
Kif2c
Eif4h
Hsp90ab1
Pyroxd1
Nkg7
Cldnd2
Gm17660
Brd2
Trim40
Trim31
Raf1
Ifna6
Ifna5
Aplp2
Atp1a1
Gm648
Ankrd28
Jpt1
Ankrd44
Tcirg1
Tcim
Ndufs8
Mpp7
Gadd45a
Nags
Gpr152
Cabp4
Dpysl3
Vars
D17H6S56E-5
Arg1
Ptprcap
Prdx1
Actb
Rxfp4
Pick1
Mobp
Hbegf
Eif4g2
Caln1
Abcf3
Ss18l2
Zfp980
Vps37d
Stk35
Rwdd2b
Rpl17
Ltn1
BC031181
Mta3
Dnajc27
Dgat2
Nlrp4c
Srgn
AU018091
Vps35l
Slc25a13
Clu
Tmem116
Mat2a
Erp29
Tubb4b
Stpg3
Slc34a3
Ifna7
Fam166a
Mrm2
Tcte3
Slc4a9
Ermard
BC005537
Id3
B3gnt7
Dhx8
Cyfip2
Zfp791
Dhx32
Copz1
H2-Q8
H2-Q6
Rab8a
Hspbp1
Brsk1
Lman1
Il3ra
Ccng2
Mdm4
Kmt5b
Ell3
Trmt1
Serpinf2
Nacc1
Mpzl1
Spen
Magel2
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Zfp988
Errfi1
Wif1
Exosc6
Dpf3
Adam32
Tmbim1
Srsf2
Mfsd11
Mettl23
Jmjd6
Gipc1
Lipe
Men1
Map4k2
Sf3b1
Hcrt
Eif4a1
Cd68
Serpinh1
Mknk2
Slc39a4
Tmem230
Tmem129
Tacc3
Slbp
Rsph3a
Pcna
Cds2
Ptger1
Dusp1
Cog6
Appl2
Nme1
Abcc4
Zfp839
Dnajc30
Bud23
Trim2
Ccdc120
Tmed10
P4ha1
Skp1
Ctnna3
Gucy1a2
Zfp979
Gas1
G0s2
Ndufaf3
Impdh2
Dhx9
Dalrd3
Mypn
Bcl2l11
Sema4b
Itch
Camk1
Snrnp35
Rilpl2